BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0119.p (464 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_05638269.1| major facilitator transporter [Pseudomonas sy... 372 e-101 ref|YP_004810600.1| general substrate transporter [Streptomyces ... 371 e-100 ref|ZP_06588247.1| conserved hypothetical protein [Streptomyces ... 362 6e-98 ref|ZP_04712521.1| major facilitator superfamily permease [Strep... 362 7e-98 ref|YP_003768096.1| major facilitator transporter [Amycolatopsis... 362 1e-97 >ref|ZP_05638269.1| major facilitator transporter [Pseudomonas syringae pv. tabaci ATCC 11528] gb|EGH88356.1| major facilitator transporter [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 442 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 195/440 (44%), Positives = 290/440 (65%), Gaps = 6/440 (1%) Query: 24 RDASNAADRANAGVGLERQRVIALRSSVVGTALEWYDFFLYGTAAAIVFNVLFFTKLDPM 83 + S A+ + +++V L SSV+G+ +EWYD+ LYG AAA+VFN LFF P Sbjct: 5 QSGSWASPSTETKIDSGKRKV--LISSVIGSIVEWYDYTLYGVAAALVFNHLFFPNFSPA 62 Query: 84 IGTLAAFGSYALGFVVRPLGGFVFGHIGDRIGRKNVLVITLLMMGLSTTLIGFLPTYASI 143 GT+AAFGS+A+GF+ RPLGG+ G +GDRIGRK LV+TL++MG+STTLIG LPTY I Sbjct: 63 AGTIAAFGSFAVGFIARPLGGWFAGQMGDRIGRKTTLVLTLMLMGISTTLIGLLPTYEQI 122 Query: 144 GIAAPILLTLLRLIQGFAAGAEFGGAVTMSAEYAPVNKRGYYASWPGVGVALGVVLSAGV 203 G+ AP LL L+R++QGFA G E+GGAV M+ E+AP N+RG + ++P GV+ G+VL + Sbjct: 123 GMWAPALLVLMRVVQGFAVGGEWGGAVLMAVEHAPDNRRGMWGAFPQTGVSAGLVLGSAA 182 Query: 204 FTLVRQMPEADFMNYGWRIPFILSSIGLAVGMYIRLYVLESPAFEKIKSKKAVQKSPVSA 263 F +PEADF+++GWRIPF+ S + VG++IRL ESPAF ++K A +KSP Sbjct: 183 FAAASALPEADFLSWGWRIPFLFSVLLAIVGLFIRLKTEESPAFLEVKKTVAERKSPALD 242 Query: 264 VWKHHRRHLFIAIGARFSENTAGYIFQVWALSYLTAQLKIDASIGLVAVLIGAGLGALLN 323 V+KHHR+ L +A+GARF+E YI+ V+ L++ + S L+ V+I A + Sbjct: 243 VFKHHRKPLLLALGARFAEGGNYYIYTVFILAFTAQYTSLAKSDVLLVVMIAALFNIVSI 302 Query: 324 PFWGMLSDRIGRKPVYILGILVMILGSWPFFMMLETRETPMIIAGFVMMIVFGLYPMFSV 383 PFWG +SDR+GR+PV+I G L + + ++PFF+M + + A + + G P++ Sbjct: 303 PFWGAVSDRVGRRPVFIGGSLFIAISAYPFFLMAMSGSLINLGAALIAALCLGHGPVYGT 362 Query: 384 QAAFFAELFPPSVRMSGICMARELSSVITGGMAPVIATGLLAYYGGSYYPIIGYLVFMGG 443 AA++AELFP SVR SGI + + +S++ GG+ P++A+ L+ + GGS + ++ +V Sbjct: 363 LAAYYAELFPTSVRYSGISIGYQAASIVLGGITPMLASALILWAGGSPWAVVLMMVVSAL 422 Query: 444 VALIALLMAPETRGVIYEED 463 +A +L++PET Y D Sbjct: 423 IAAGTMLISPET----YRRD 438 >ref|YP_004810600.1| general substrate transporter [Streptomyces violaceusniger Tu 4113] gb|AEM80320.1| General substrate transporter [Streptomyces violaceusniger Tu 4113] Length = 452 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 188/409 (45%), Positives = 281/409 (68%), Gaps = 3/409 (0%) Query: 49 SSVVGTALEWYDFFLYGTAAAIVFNVLFFTKLDPMIGTLAAFGSYALGFVVRPLGGFVFG 108 +S+ G+ALEWYDFFLYGTAAA+VFN LFF +P++GT+AAFG+ A+GF+ RPLGG +FG Sbjct: 17 ASLFGSALEWYDFFLYGTAAALVFNTLFFPTFNPLVGTIAAFGTNAVGFLARPLGGIIFG 76 Query: 109 HIGDRIGRKNVLVITLLMMGLSTTLIGFLPTYASIGIAAPILLTLLRLIQGFAAGAEFGG 168 H GDRIGRK++LV TL++MG++T LIG LPTYA++G+ AP+LL LR++QG A G E+GG Sbjct: 77 HFGDRIGRKSMLVTTLVIMGVATCLIGLLPTYATVGVWAPVLLVTLRVVQGIAVGGEWGG 136 Query: 169 AVTMSAEYAPVNKRGYYASWPGVGVALGVVLSAGVFTLVRQMPEAD-FMNYGWRIPFILS 227 V + +E+AP ++RG+Y++W GV LG VLSA + L +++ + F+ +GWRIPF++ Sbjct: 137 GVLIVSEHAPSHRRGFYSAWSQTGVGLGFVLSAAAYALAQEVTTKESFLAWGWRIPFVVG 196 Query: 228 SIGLAVGMYIRLYVLESPAFEKIKSKKAVQKSPVSAVWKHHRRHLFIAIGARFSENTAGY 287 + A G+ IRL ++E+PAF++ +S+ P+ V + H + + IA GAR +E A Y Sbjct: 197 ILLTAAGLLIRLRIMETPAFQEKESEPKKSAPPLLDVIRTHPKSILIAFGARVAETGASY 256 Query: 288 IFQVWALSYLTAQLKIDASIGLVAVLIGAGLGALLNPFWGMLSDRIGRKPVYILGILVMI 347 +F ++LSY +++ + + L A+++G + P +G LSDRIGR+PVYI G + +I Sbjct: 257 LFLTFSLSY-ASEIGVGKGVVLAALVVGMLFESFAMPMFGALSDRIGRRPVYIGGAIAVI 315 Query: 348 LGSWPFFMMLETRETPMIIAGFVMMIVFGLYPMFSVQAAFFAELFPPSVRMSGICMAREL 407 + ++PFF + ++R +I + +V G M Q AFF ELF V SG+ + EL Sbjct: 316 VWAYPFFALFDSRNPVLIFVAIFVAVVIGHGAMIGTQPAFFTELFASRVAYSGLALGHEL 375 Query: 408 SSVITGGMAPVIATGLLAYYGGSYYPIIGYLVFMGGVALIALLMAPETR 456 +S+I GG +P++AT LLA+ G S +PI +LV MG V + A+ APET Sbjct: 376 ASMIVGGFSPIVATALLAWSGAS-WPIALFLVGMGLVTVFAVAAAPETN 423 >ref|ZP_06588247.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gb|EFE78708.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 477 Score = 362 bits (930), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 204/434 (47%), Positives = 285/434 (65%), Gaps = 20/434 (4%) Query: 42 QRVIALRSSVVGTALEWYDFFLYGTAAAIVFNVLFFTKLDPMIGTLAAFGSYALGFVVRP 101 +R++A +S+VGT +EWYDFFLYG+AAA+VFN LFF DP++GTL AF +YA+GF RP Sbjct: 30 RRIVA--ASLVGTTIEWYDFFLYGSAAALVFNSLFFPSSDPLVGTLLAFLTYAVGFAARP 87 Query: 102 LGGFVFGHIGDRIGRKNVLVITLLMMGLSTTLIGFLPTYASIGIAAPILLTLLRLIQGFA 161 LGG VFGH GD+IGRK +LV++LLMMG +T +G LPT+ASIG+ APILLT+LRL+QGFA Sbjct: 88 LGGIVFGHYGDKIGRKKLLVLSLLMMGGATFAMGLLPTHASIGVWAPILLTVLRLVQGFA 147 Query: 162 AGAEFGGAVTMSAEYAPVNKRGYYASWPGVGVALGVVLSAGVFTLVR--QMPEADFMNYG 219 G E+GGAV + +E+ +RG++ASWP G G +L+ GV L+ Q EA F+ +G Sbjct: 148 LGGEWGGAVLLVSEHGGDERRGFWASWPQSGAPGGNLLATGVLALLAAVQSDEA-FLAWG 206 Query: 220 WRIPFILSSIGLAVGMYIRLYVLESPAFEKIKSKKA-------VQKSPVSAVWKHHRRHL 272 WR+PF+LS I + +G++IR+ V ESP F + + K A ++ PV V++ R + Sbjct: 207 WRVPFLLSGILVMIGLWIRISVEESPVFLEAQRKSAEAAAQGEKEQPPVVEVFRRSWREV 266 Query: 273 FIAIGARFSENTAGYIFQVWALSYLTAQLKIDASIGLVAVLIGAGLGALLNPFWGMLSDR 332 +AIG RF EN + YI + L Y+T L++ S L AVLIG+ + + P WG LSDR Sbjct: 267 LLAIGTRFGENISYYILTAFLLVYVTVHLEMSKSDALNAVLIGSAVHFVTIPLWGALSDR 326 Query: 333 IGRKPVYILGILVMILGSWPFFMMLETRETPMIIAGFVMMIVFGLY---PMFSVQAAFFA 389 +GR+PV ++G + M ++ FF +L+T+ P+I V+ + GL M+ QAAF + Sbjct: 327 LGRRPVTLIGAVGMAAWAFGFFALLDTKSFPVI----VLAVTLGLLLHGAMYGPQAAFIS 382 Query: 390 ELFPPSVRMSGICMARELSSVITGGMAPVIATGLLAYYGGSYYPIIGYLVFMGGVALIAL 449 ELF VR SG M +L+S+I G +AP+IA LL YG S PI YL F V + + Sbjct: 383 ELFDTKVRYSGASMGSQLASIIGGALAPLIAVELLKDYGSS-VPISVYLCFASLVTAVTV 441 Query: 450 LMAPETRGVIYEED 463 +A ETRG +D Sbjct: 442 WVAKETRGRDLTKD 455 >ref|ZP_04712521.1| major facilitator superfamily permease [Streptomyces roseosporus NRRL 11379] Length = 462 Score = 362 bits (929), Expect = 7e-98, Method: Compositional matrix adjust. Identities = 204/434 (47%), Positives = 285/434 (65%), Gaps = 20/434 (4%) Query: 42 QRVIALRSSVVGTALEWYDFFLYGTAAAIVFNVLFFTKLDPMIGTLAAFGSYALGFVVRP 101 +R++A +S+VGT +EWYDFFLYG+AAA+VFN LFF DP++GTL AF +YA+GF RP Sbjct: 15 RRIVA--ASLVGTTIEWYDFFLYGSAAALVFNSLFFPSSDPLVGTLLAFLTYAVGFAARP 72 Query: 102 LGGFVFGHIGDRIGRKNVLVITLLMMGLSTTLIGFLPTYASIGIAAPILLTLLRLIQGFA 161 LGG VFGH GD+IGRK +LV++LLMMG +T +G LPT+ASIG+ APILLT+LRL+QGFA Sbjct: 73 LGGIVFGHYGDKIGRKKLLVLSLLMMGGATFAMGLLPTHASIGVWAPILLTVLRLVQGFA 132 Query: 162 AGAEFGGAVTMSAEYAPVNKRGYYASWPGVGVALGVVLSAGVFTLVR--QMPEADFMNYG 219 G E+GGAV + +E+ +RG++ASWP G G +L+ GV L+ Q EA F+ +G Sbjct: 133 LGGEWGGAVLLVSEHGGDERRGFWASWPQSGAPGGNLLATGVLALLAAVQSDEA-FLAWG 191 Query: 220 WRIPFILSSIGLAVGMYIRLYVLESPAFEKIKSKKA-------VQKSPVSAVWKHHRRHL 272 WR+PF+LS I + +G++IR+ V ESP F + + K A ++ PV V++ R + Sbjct: 192 WRVPFLLSGILVMIGLWIRISVEESPVFLEAQRKSAEAAAQGEKEQPPVVEVFRRSWREV 251 Query: 273 FIAIGARFSENTAGYIFQVWALSYLTAQLKIDASIGLVAVLIGAGLGALLNPFWGMLSDR 332 +AIG RF EN + YI + L Y+T L++ S L AVLIG+ + + P WG LSDR Sbjct: 252 LLAIGTRFGENISYYILTAFLLVYVTVHLEMSKSDALNAVLIGSAVHFVTIPLWGALSDR 311 Query: 333 IGRKPVYILGILVMILGSWPFFMMLETRETPMIIAGFVMMIVFGLY---PMFSVQAAFFA 389 +GR+PV ++G + M ++ FF +L+T+ P+I V+ + GL M+ QAAF + Sbjct: 312 LGRRPVTLIGAVGMAAWAFGFFALLDTKSFPVI----VLAVTLGLLLHGAMYGPQAAFIS 367 Query: 390 ELFPPSVRMSGICMARELSSVITGGMAPVIATGLLAYYGGSYYPIIGYLVFMGGVALIAL 449 ELF VR SG M +L+S+I G +AP+IA LL YG S PI YL F V + + Sbjct: 368 ELFDTKVRYSGASMGSQLASIIGGALAPLIAVELLKDYGSS-VPISVYLCFASLVTAVTV 426 Query: 450 LMAPETRGVIYEED 463 +A ETRG +D Sbjct: 427 WVAKETRGRDLTKD 440 >ref|YP_003768096.1| major facilitator transporter [Amycolatopsis mediterranei U32] gb|ADJ47694.1| major facilitator transporter [Amycolatopsis mediterranei U32] gb|AEK44581.1| major facilitator transporter [Amycolatopsis mediterranei S699] Length = 455 Score = 362 bits (928), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 194/420 (46%), Positives = 284/420 (67%), Gaps = 8/420 (1%) Query: 49 SSVVGTALEWYDFFLYGTAAAIVFNVLFFTKLDPMIGTLAAFGSYALGFVVRPLGGFVFG 108 +S++GT +EWYDFFLY +AAA+VFN LFF +P+ GTL AF +YA+GF+ RP+GG VFG Sbjct: 15 ASLIGTTIEWYDFFLYTSAAALVFNKLFFPTANPLTGTLLAFLTYAVGFLARPVGGLVFG 74 Query: 109 HIGDRIGRKNVLVITLLMMGLSTTLIGFLPTYASIGIAAPILLTLLRLIQGFAAGAEFGG 168 H GDR+GRK +LV++L++MG ST L+G LPTYA+ G+ APILLTLLRL+QGFA G E+GG Sbjct: 75 HFGDRLGRKKLLVVSLVLMGGSTCLMGVLPTYATAGVLAPILLTLLRLVQGFALGGEWGG 134 Query: 169 AVTMSAEYAPVNKRGYYASWPGVGVALGVVLSAGVFTLVR-QMPEADFMNYGWRIPFILS 227 AV + +E+ +RG++ASWP G G +L+ V ++ +A FM++GWR+PF+LS Sbjct: 135 AVLIVSEHGDDRRRGFWASWPQCGAPGGNLLATAVLAILSATQSDATFMSWGWRVPFLLS 194 Query: 228 SIGLAVGMYIRLYVLESPAF---EKIKSKKAVQKSPVSAVWKHHRRHLFIAIGARFSENT 284 + L +G++IRL V ESP F ++ +A + PV V+++ R + I IGAR +EN Sbjct: 195 GVLLLIGLWIRLAVAESPVFLAAQRQAEARAEKHVPVVEVFRNSWRQVLITIGARMAENV 254 Query: 285 AGYIFQVWALSYLTAQLKIDASIGLVAVLIGAGLGALLNPFWGMLSDRIGRKPVYILGIL 344 + Y+ + L Y+T L + +GL AVLIG+ + + P WG LSDR+GR+PVY+ G + Sbjct: 255 SYYVITAFILVYVTTGLHLPKGVGLTAVLIGSAVHFVTIPLWGALSDRVGRRPVYLFGAI 314 Query: 345 VMILGSWPFFMMLETRETPMII-AGFVMMIVFGLYPMFSVQAAFFAELFPPSVRMSGICM 403 M L + FF +L+T+ + +I+ A V +++ G M+ QAAFFAE FP VR +G+ + Sbjct: 315 GMALWGFAFFALLDTKSSAVIVLATTVGLVLHG--AMYGPQAAFFAEQFPTRVRYTGLSV 372 Query: 404 ARELSSVITGGMAPVIATGLLAYYGGSYYPIIGYLVFMGGVALIALLMAPETRGVIYEED 463 +LSS+ G +AP+IA L + + GS P+ Y+ M + +IALL A ETRG ++D Sbjct: 373 GGQLSSIAAGAVAPLIAVALFSSW-GSTVPVSLYVAAMCLITVIALLSARETRGESLQDD 431