BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0117.p (239 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774640.1| Tol-Pal cell envelope complex subunit YbgF p... 365 4e-99 ref|ZP_08273696.1| TPR repeat containing exported protein [Oxalo... 340 1e-91 ref|YP_001100661.1| putative transmembrane protein [Herminiimona... 334 6e-90 ref|YP_004754056.1| putative periplasmic protein [Collimonas fun... 320 1e-85 ref|YP_001354159.1| Tol-Pal cell envelope complex subunit YbgF [... 312 2e-83 >ref|YP_003774640.1| Tol-Pal cell envelope complex subunit YbgF protein [Herbaspirillum seropedicae SmR1] gb|ADJ62732.1| Tol-Pal cell envelope complex subunit YbgF protein [Herbaspirillum seropedicae SmR1] Length = 251 Score = 365 bits (936), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 176/230 (76%), Positives = 203/230 (88%) Query: 10 LPATAHAGLFDDDEARKAILDIRNKIDALQKDVANKTDKTSALSLSDQNDQLRQEIARLR 69 LP TA AGLFDDDEARKAILDIR+KI+ALQ+DVANK DK S L+LSD+ND L+ +IA LR Sbjct: 22 LPLTARAGLFDDDEARKAILDIRSKIEALQRDVANKADKNSVLTLSDRNDNLQSQIAALR 81 Query: 70 GQVEVLSNELANTQQRQKDFYVDLDARVRKLEPQKVTIDGKESSVDLNEQKTYDAALNLF 129 GQ+EVL+NE+ N QQRQKDFYVDLDAR+RKLEPQ+V +DG+ +V ++EQ+ YDAAL+ F Sbjct: 82 GQIEVLTNEITNAQQRQKDFYVDLDARLRKLEPQQVQVDGQTVAVGVSEQQAYDAALSQF 141 Query: 130 KGGDYKGAGAAFSDFLKRYPQSGYAPSAQYWVGNSLYAQRDYKGAIAAQQVVVKNYPDSP 189 KGGDYKGA AF+DFLKRYPQSGYAPSAQYW GNSLYAQRDYKGAIAAQQVVVKNYPD+P Sbjct: 142 KGGDYKGAANAFADFLKRYPQSGYAPSAQYWQGNSLYAQRDYKGAIAAQQVVVKNYPDNP 201 Query: 190 KVADAMLNIGSSYVELKDKAAAKKAWDALIAKYPESPAAQTGKEKLATLK 239 K ADA+LNI SS ELKDKAAAKK + LIAKYP +PAAQTGKE++A+LK Sbjct: 202 KAADALLNIASSQAELKDKAAAKKTLEQLIAKYPNTPAAQTGKERMASLK 251 >ref|ZP_08273696.1| TPR repeat containing exported protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32830.1| TPR repeat containing exported protein [Oxalobacteraceae bacterium IMCC9480] Length = 256 Score = 340 bits (872), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 163/243 (67%), Positives = 206/243 (84%), Gaps = 7/243 (2%) Query: 1 MAAVASLSVLPATAHAGLFDDDEARKAILDIRNKIDALQKD----VANKTDKTSALSLSD 56 +AAV+S + LPA AGLFDDDEAR+AILDIR +ID++++D + K DK S L ++ Sbjct: 14 LAAVSSFT-LPA--QAGLFDDDEARRAILDIRARIDSVRRDADIKLDTKPDKNSLLDVAS 70 Query: 57 QNDQLRQEIARLRGQVEVLSNELANTQQRQKDFYVDLDARVRKLEPQKVTIDGKESSVDL 116 QN+QLRQE+A+LRGQ+EVL+NE+ANTQQRQKDFYVDLD R+RKLEPQK+T+DGKE+SV+ Sbjct: 71 QNEQLRQEVAKLRGQLEVLTNEVANTQQRQKDFYVDLDTRLRKLEPQKMTVDGKETSVEP 130 Query: 117 NEQKTYDAALNLFKGGDYKGAGAAFSDFLKRYPQSGYAPSAQYWVGNSLYAQRDYKGAIA 176 EQKTY+AAL LFK GDYK +GAAF+DF++RYPQSG+APSAQY++G + YAQRDY+ AI Sbjct: 131 AEQKTYEAALALFKAGDYKTSGAAFTDFMRRYPQSGFAPSAQYFLGTTYYAQRDYRNAIT 190 Query: 177 AQQVVVKNYPDSPKVADAMLNIGSSYVELKDKAAAKKAWDALIAKYPESPAAQTGKEKLA 236 AQQVVVKNYP++PK ADA+LNI S Y ELKD+ AAKK+ + L+A+YP SPAAQT KE+LA Sbjct: 191 AQQVVVKNYPENPKAADALLNIASCYAELKDRPAAKKSLETLVAQYPSSPAAQTAKERLA 250 Query: 237 TLK 239 L+ Sbjct: 251 ALR 253 >ref|YP_001100661.1| putative transmembrane protein [Herminiimonas arsenicoxydans] emb|CAL62540.1| Conserved hypothetical protein; putative TPR repeat [Herminiimonas arsenicoxydans] Length = 245 Score = 334 bits (857), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 156/238 (65%), Positives = 196/238 (82%), Gaps = 3/238 (1%) Query: 2 AAVASLSVLPATAHAGLFDDDEARKAILDIRNKIDALQKDVANKTDKTSALSLSDQNDQL 61 A +A+ S +AHA LF DDEAR+AILD+R K+DALQ+ +K + T+ L L++QN+QL Sbjct: 11 ALMAAFSCASLSAHAALFGDDEARRAILDVRTKVDALQQ---SKAESTAVLELANQNEQL 67 Query: 62 RQEIARLRGQVEVLSNELANTQQRQKDFYVDLDARVRKLEPQKVTIDGKESSVDLNEQKT 121 +QEIARLRGQ+EVLSNE+AN QQRQKDFYVDLD R+RKLEPQ V +DG+E+SV+L+EQ+ Sbjct: 68 KQEIARLRGQIEVLSNEVANAQQRQKDFYVDLDNRLRKLEPQIVAVDGQEASVELSEQRM 127 Query: 122 YDAALNLFKGGDYKGAGAAFSDFLKRYPQSGYAPSAQYWVGNSLYAQRDYKGAIAAQQVV 181 YD AL LFK GDYK +G AF+DF++RYPQS YAPSAQYW+GN+ YAQRDY+ AI AQQ + Sbjct: 128 YDNALALFKAGDYKKSGTAFADFIQRYPQSAYAPSAQYWIGNAYYAQRDYRNAITAQQAL 187 Query: 182 VKNYPDSPKVADAMLNIGSSYVELKDKAAAKKAWDALIAKYPESPAAQTGKEKLATLK 239 +K YP +PK ADAMLNI SSY ELKD+ AAKKA ++L+A+YP +PAAQT KE+LA K Sbjct: 188 LKKYPANPKAADAMLNIASSYTELKDRTAAKKALESLVAQYPNTPAAQTAKERLANFK 245 >ref|YP_004754056.1| putative periplasmic protein [Collimonas fungivorans Ter331] gb|AEK63233.1| Putative periplasmic protein [Collimonas fungivorans Ter331] Length = 249 Score = 320 bits (819), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 156/227 (68%), Positives = 187/227 (82%) Query: 13 TAHAGLFDDDEARKAILDIRNKIDALQKDVANKTDKTSALSLSDQNDQLRQEIARLRGQV 72 TA AGLFDDDEAR+AILDIR+KIDA+ V K DKTS+L+LSDQND+L QEIA+LRGQ+ Sbjct: 23 TARAGLFDDDEARRAILDIRSKIDAVNAKVDTKADKTSSLNLSDQNDRLNQEIAKLRGQI 82 Query: 73 EVLSNELANTQQRQKDFYVDLDARVRKLEPQKVTIDGKESSVDLNEQKTYDAALNLFKGG 132 EVL+NELANTQQRQKDFYVDLD R+RKLEPQKV++DG+E S+ N+QK YDAAL FK G Sbjct: 83 EVLTNELANTQQRQKDFYVDLDTRMRKLEPQKVSVDGQEVSIGANDQKAYDAALATFKAG 142 Query: 133 DYKGAGAAFSDFLKRYPQSGYAPSAQYWVGNSLYAQRDYKGAIAAQQVVVKNYPDSPKVA 192 DYK A AFS+F++ P SG APSAQY++GNS YA RDYK AIAAQQVVV Y D+PK A Sbjct: 143 DYKTAATAFSNFVRSSPDSGLAPSAQYFLGNSYYALRDYKNAIAAQQVVVSKYADNPKAA 202 Query: 193 DAMLNIGSSYVELKDKAAAKKAWDALIAKYPESPAAQTGKEKLATLK 239 DA+L I SSY ELK+K +K+A + L+++YP + AAQT KE+LATLK Sbjct: 203 DALLTISSSYTELKNKPQSKRALEQLLSQYPNTQAAQTAKERLATLK 249 >ref|YP_001354159.1| Tol-Pal cell envelope complex subunit YbgF [Janthinobacterium sp. Marseille] gb|ABR90199.1| YbgF subunit of Tol-Pal Cell Envelope Complex [Janthinobacterium sp. Marseille] Length = 243 Score = 312 bits (800), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 148/238 (62%), Positives = 190/238 (79%), Gaps = 3/238 (1%) Query: 2 AAVASLSVLPATAHAGLFDDDEARKAILDIRNKIDALQKDVANKTDKTSALSLSDQNDQL 61 A +A+ S +AHA LF DDEARKAI+++R K+D +Q+ +K + ++ LSLS+QN+ L Sbjct: 9 ALMAAFSCASLSAHAALFGDDEARKAIIELRGKVDGIQQ---SKAETSAVLSLSNQNEAL 65 Query: 62 RQEIARLRGQVEVLSNELANTQQRQKDFYVDLDARVRKLEPQKVTIDGKESSVDLNEQKT 121 +QEI+RL GQ+EVLSNE+ N QQRQKDFYVDLD R+RKLEPQ V +DGK++ V +EQ Sbjct: 66 KQEISRLNGQIEVLSNEVQNLQQRQKDFYVDLDNRLRKLEPQVVAVDGKDAMVGQSEQSA 125 Query: 122 YDAALNLFKGGDYKGAGAAFSDFLKRYPQSGYAPSAQYWVGNSLYAQRDYKGAIAAQQVV 181 YD+AL LFK GDYK +G AF DF++RYP+S YAPSAQYW+GN+ YAQRDYK AI AQQ + Sbjct: 126 YDSALALFKAGDYKKSGTAFGDFVQRYPESAYAPSAQYWIGNAYYAQRDYKNAITAQQAL 185 Query: 182 VKNYPDSPKVADAMLNIGSSYVELKDKAAAKKAWDALIAKYPESPAAQTGKEKLATLK 239 +K YPD+PK ADA+LNI SS ELKD+AAAKK ++L+AKYP +PAAQT KE+LA+ K Sbjct: 186 LKKYPDNPKAADALLNIASSQTELKDRAAAKKTLESLVAKYPNAPAAQTAKERLASFK 243