BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0103.p (179 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001897565.1| AlkA domain-containing protein [Burkholderia... 275 2e-72 ref|ZP_06840431.1| AlkA domain protein [Burkholderia sp. Ch1-1] ... 271 3e-71 ref|ZP_02885414.1| AlkA domain protein [Burkholderia graminis C4... 270 6e-71 ref|YP_004230052.1| methylated-DNA--(protein)-cysteine S-methylt... 267 6e-70 ref|YP_003908741.1| AlkA domain-containing protein [Burkholderia... 266 9e-70 >ref|YP_001897565.1| AlkA domain-containing protein [Burkholderia phytofirmans PsJN] gb|ACD18341.1| AlkA domain protein [Burkholderia phytofirmans PsJN] Length = 305 Score = 275 bits (704), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 140/179 (78%), Positives = 150/179 (83%), Gaps = 5/179 (2%) Query: 1 VRTIVGQQVSVKAATTIVGRLVERAGERIEGHPHAATAWRFPTPHALATVDLAAIGMPGK 60 VR IVGQQVSVKAATTI+GRLV+RAGERIEGHPH TAWRFPTP ALA VDLA IGMPGK Sbjct: 132 VRAIVGQQVSVKAATTIIGRLVQRAGERIEGHPHENTAWRFPTPAALAAVDLAQIGMPGK 191 Query: 61 RVAALQGFAHAVAQGDVPVDDPAADTADLRKALLGLPGIGPWTVEYVAMRAWRDARCGDA 120 RVAALQGFAHAVA GDVP+D AD LR ALL LPGIGPWTVEYVAMRAWR DA Sbjct: 192 RVAALQGFAHAVATGDVPLDSNTADAGSLRAALLALPGIGPWTVEYVAMRAWR-----DA 246 Query: 121 DAWPASDLVLMQAIIDRDPSLLKLTHQKSRAETWRPWRAYVAMHLWNEIADRMGQARGG 179 DAWPA DLVLMQ+I RDPSL++ T Q++R +TWRPWRAY AMHLWNE+ADR G ARGG Sbjct: 247 DAWPAWDLVLMQSICARDPSLVRPTQQRARTDTWRPWRAYAAMHLWNEVADRAGAARGG 305 >ref|ZP_06840431.1| AlkA domain protein [Burkholderia sp. Ch1-1] gb|EFG72151.1| AlkA domain protein [Burkholderia sp. Ch1-1] Length = 305 Score = 271 bits (693), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 139/179 (77%), Positives = 149/179 (83%), Gaps = 5/179 (2%) Query: 1 VRTIVGQQVSVKAATTIVGRLVERAGERIEGHPHAATAWRFPTPHALATVDLAAIGMPGK 60 VR IVGQQVSVKAATTI+GRLV+RAG RIEGHPH TAWRFPTP ALA VDLA IGMPGK Sbjct: 132 VRAIVGQQVSVKAATTIIGRLVQRAGGRIEGHPHENTAWRFPTPAALAAVDLAQIGMPGK 191 Query: 61 RVAALQGFAHAVAQGDVPVDDPAADTADLRKALLGLPGIGPWTVEYVAMRAWRDARCGDA 120 RVAALQGFAHAVA GDVP+D AD LR ALL LPGIGPWTVEYVAMRAWR DA Sbjct: 192 RVAALQGFAHAVATGDVPLDSNTADADSLRAALLALPGIGPWTVEYVAMRAWR-----DA 246 Query: 121 DAWPASDLVLMQAIIDRDPSLLKLTHQKSRAETWRPWRAYVAMHLWNEIADRMGQARGG 179 DAWPA DLVLMQ+I RDPSL++ T Q++R +TWRPWRAY AMHLWNE+ADR G ARGG Sbjct: 247 DAWPAWDLVLMQSICARDPSLVRPTQQRTRTDTWRPWRAYAAMHLWNEVADRAGAARGG 305 >ref|ZP_02885414.1| AlkA domain protein [Burkholderia graminis C4D1M] gb|EDT08857.1| AlkA domain protein [Burkholderia graminis C4D1M] Length = 305 Score = 270 bits (690), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 135/179 (75%), Positives = 149/179 (83%), Gaps = 5/179 (2%) Query: 1 VRTIVGQQVSVKAATTIVGRLVERAGERIEGHPHAATAWRFPTPHALATVDLAAIGMPGK 60 VR IVGQQ+SVK ATTI+GRLV+RAGERI+GHPH TAWRFPTP ALA VDLA IGMPGK Sbjct: 132 VRAIVGQQISVKGATTIIGRLVQRAGERIDGHPHDNTAWRFPTPEALAAVDLAQIGMPGK 191 Query: 61 RVAALQGFAHAVAQGDVPVDDPAADTADLRKALLGLPGIGPWTVEYVAMRAWRDARCGDA 120 RVAALQGFAHAVA GDVP+D AD ++LR ALL LPGIGPWTVEYVAMRAWR D Sbjct: 192 RVAALQGFAHAVATGDVPLDSATADASELRAALLALPGIGPWTVEYVAMRAWR-----DP 246 Query: 121 DAWPASDLVLMQAIIDRDPSLLKLTHQKSRAETWRPWRAYVAMHLWNEIADRMGQARGG 179 DAWPA DLVLMQ+I RDPSL++ T Q++R + WRPWRAY AMHLWNE+ADR G ARGG Sbjct: 247 DAWPAWDLVLMQSICARDPSLVRPTQQRTRTDAWRPWRAYAAMHLWNEVADRAGAARGG 305 >ref|YP_004230052.1| methylated-DNA--(protein)-cysteine S-methyltransferase [Burkholderia sp. CCGE1001] gb|ADX56992.1| Methylated-DNA--(protein)-cysteine S-methyltransferase [Burkholderia sp. CCGE1001] Length = 305 Score = 267 bits (682), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 135/179 (75%), Positives = 146/179 (81%), Gaps = 5/179 (2%) Query: 1 VRTIVGQQVSVKAATTIVGRLVERAGERIEGHPHAATAWRFPTPHALATVDLAAIGMPGK 60 VR IVGQQ+SVK ATTI+GRLV+RAGERIEGH H TAWRFPTP ALA DLA IGMPGK Sbjct: 132 VRAIVGQQISVKGATTIIGRLVQRAGERIEGHAHENTAWRFPTPEALARADLAQIGMPGK 191 Query: 61 RVAALQGFAHAVAQGDVPVDDPAADTADLRKALLGLPGIGPWTVEYVAMRAWRDARCGDA 120 RVAALQGFAHAVA GDVP+D AAD LR ALL LPGIGPWTVEYVAMRAWR D Sbjct: 192 RVAALQGFAHAVASGDVPLDSAAADANTLRAALLALPGIGPWTVEYVAMRAWR-----DP 246 Query: 121 DAWPASDLVLMQAIIDRDPSLLKLTHQKSRAETWRPWRAYVAMHLWNEIADRMGQARGG 179 DAWPA DLVLMQ+I RDPSL++ T Q++R + WRPWRAY AMHLWNE+ADR G ARGG Sbjct: 247 DAWPAWDLVLMQSICARDPSLVRPTQQRTRTDAWRPWRAYAAMHLWNEVADRAGAARGG 305 >ref|YP_003908741.1| AlkA domain-containing protein [Burkholderia sp. CCGE1003] gb|ADN59450.1| AlkA domain protein [Burkholderia sp. CCGE1003] Length = 305 Score = 266 bits (680), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 135/179 (75%), Positives = 147/179 (82%), Gaps = 5/179 (2%) Query: 1 VRTIVGQQVSVKAATTIVGRLVERAGERIEGHPHAATAWRFPTPHALATVDLAAIGMPGK 60 VR IVGQQ+SVK ATTI+GRLV+RAGERIEGH H TAWRFPTP ALATVDLA IGMPGK Sbjct: 132 VRAIVGQQISVKGATTIIGRLVQRAGERIEGHAHENTAWRFPTPQALATVDLAQIGMPGK 191 Query: 61 RVAALQGFAHAVAQGDVPVDDPAADTADLRKALLGLPGIGPWTVEYVAMRAWRDARCGDA 120 RVAALQGFA AVA GDVP+D+ DT LR ALL LPGIGPWTVEYVAMRAWR D Sbjct: 192 RVAALQGFARAVASGDVPLDNAGIDTDSLRAALLALPGIGPWTVEYVAMRAWR-----DP 246 Query: 121 DAWPASDLVLMQAIIDRDPSLLKLTHQKSRAETWRPWRAYVAMHLWNEIADRMGQARGG 179 DAWPA DLVLMQ+I RDPSL++ T Q++R + WRPWRAY AMHLWNE+ADR G ARGG Sbjct: 247 DAWPAWDLVLMQSISARDPSLVRPTQQRTRTDGWRPWRAYAAMHLWNEVADRAGAARGG 305