BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0098.p (232 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004754406.1| 3-demethylubiquinone-9 3-methyltransferase [... 412 e-113 ref|YP_001354368.1| 3-demethylubiquinone-9 3-methyltransferase [... 405 e-111 ref|YP_003777083.1| 3-demethylubiquinone-9 3-methyl transferase ... 403 e-110 ref|ZP_08272602.1| 3-demethylubiquinone-9 3-methyltransferase [O... 397 e-109 ref|YP_001100827.1| bifunctional 3-demethylubiquinone-9 3-methyl... 385 e-105 >ref|YP_004754406.1| 3-demethylubiquinone-9 3-methyltransferase [Collimonas fungivorans Ter331] gb|AEK63583.1| 3-demethylubiquinone-9 3-methyltransferase [Collimonas fungivorans Ter331] Length = 235 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 188/230 (81%), Positives = 212/230 (92%) Query: 1 MNADPQELQKFSDLAHRWWDPTSEFRPLHEINPLRLEWINARAALSGKSVVDVGCGGGIL 60 MNADP EL+KFSDLAHRWWDP SEFRPLHEINPLRLEWIN+RAAL+GK V+D+GCGGGIL Sbjct: 5 MNADPSELKKFSDLAHRWWDPESEFRPLHEINPLRLEWINSRAALAGKQVLDIGCGGGIL 64 Query: 61 AESMARKGARVTGIDLSEKALKVADLHGMESGIQVRYEKIAAEDLAAREPGQFDVVTCME 120 AESMARKGA VTGIDLS+KALKVADLH +ESG+QVRYEKIAAE++A RE GQFDVVTCME Sbjct: 65 AESMARKGAVVTGIDLSDKALKVADLHSLESGVQVRYEKIAAEEMAGREAGQFDVVTCME 124 Query: 121 MLEHVPDPASIVRACTAMVKPGGHVFFSTLNRNPKAYLFAIIGAEYLLRMLPKGTHDYAK 180 MLEHVPDPASIVRAC +VKPGG VFFSTLNRN KAYL A++ AEYLLRMLPKGTHDYAK Sbjct: 125 MLEHVPDPASIVRACATLVKPGGQVFFSTLNRNLKAYLQAVLAAEYLLRMLPKGTHDYAK 184 Query: 181 FITPAELARFIREAGLELDGFKGLSYNPLTKLYSINQDTSVNYMVACRKP 230 FITPAELA+F+R AGL +D +G+SYNPLT++YS+NQDTSVNY++AC +P Sbjct: 185 FITPAELAQFVRNAGLTVDVMRGMSYNPLTQIYSLNQDTSVNYLMACTRP 234 >ref|YP_001354368.1| 3-demethylubiquinone-9 3-methyltransferase [Janthinobacterium sp. Marseille] gb|ABR88913.1| 3-demethylubiquinone-9 3-methyltransferase [Janthinobacterium sp. Marseille] Length = 231 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 186/230 (80%), Positives = 209/230 (90%) Query: 1 MNADPQELQKFSDLAHRWWDPTSEFRPLHEINPLRLEWINARAALSGKSVVDVGCGGGIL 60 MNADP EL+KFSDLAH+WWDPTSEFRPLHEINPLRL WIN RA L+GK+VVD+GCGGGIL Sbjct: 1 MNADPLELKKFSDLAHQWWDPTSEFRPLHEINPLRLGWINGRAPLAGKNVVDIGCGGGIL 60 Query: 61 AESMARKGARVTGIDLSEKALKVADLHGMESGIQVRYEKIAAEDLAAREPGQFDVVTCME 120 AESMA+ GA VTGIDLSEKALKVADLH +ESG+QVRYE IAAEDLA RE G+FDVVTCME Sbjct: 61 AESMAKSGANVTGIDLSEKALKVADLHSLESGVQVRYELIAAEDLAEREAGRFDVVTCME 120 Query: 121 MLEHVPDPASIVRACTAMVKPGGHVFFSTLNRNPKAYLFAIIGAEYLLRMLPKGTHDYAK 180 MLEHVPDPA+IV AC + KPGG VFFST+NRNPKAYL A+IGAEYLLR+LPKGTHDYAK Sbjct: 121 MLEHVPDPAAIVAACAKLAKPGGKVFFSTINRNPKAYLHAVIGAEYLLRLLPKGTHDYAK 180 Query: 181 FITPAELARFIREAGLELDGFKGLSYNPLTKLYSINQDTSVNYMVACRKP 230 FITPAEL+R+ REAGL++D KG+ +NPLTK+YS+NQDTSVNY+VAC KP Sbjct: 181 FITPAELSRYAREAGLDIDALKGMGFNPLTKIYSLNQDTSVNYLVACTKP 230 >ref|YP_003777083.1| 3-demethylubiquinone-9 3-methyl transferase [Herbaspirillum seropedicae SmR1] gb|ADJ65175.1| 3-demethylubiquinone-9 3-methyl transferase protein [Herbaspirillum seropedicae SmR1] Length = 241 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 184/229 (80%), Positives = 208/229 (90%) Query: 1 MNADPQELQKFSDLAHRWWDPTSEFRPLHEINPLRLEWINARAALSGKSVVDVGCGGGIL 60 +NADPQE+QKFS+LAHRWWDP SEFRPLHEINPLRLEWINARA L+GK V+D+GCGGGIL Sbjct: 11 VNADPQEIQKFSELAHRWWDPGSEFRPLHEINPLRLEWINARAPLAGKKVIDIGCGGGIL 70 Query: 61 AESMARKGARVTGIDLSEKALKVADLHGMESGIQVRYEKIAAEDLAAREPGQFDVVTCME 120 AESMA KG VTGIDLS+KALKVADLH MESG+QVRYEKIAAED+AARE GQ+DVVTCME Sbjct: 71 AESMALKGGDVTGIDLSDKALKVADLHSMESGVQVRYEKIAAEDMAAREAGQYDVVTCME 130 Query: 121 MLEHVPDPASIVRACTAMVKPGGHVFFSTLNRNPKAYLFAIIGAEYLLRMLPKGTHDYAK 180 MLEHVPDPA+IVRA + KPGG +FFSTLNRN K+YL AIIGAEY+LR+LPKGTHDYAK Sbjct: 131 MLEHVPDPAAIVRAAATLAKPGGKLFFSTLNRNMKSYLMAIIGAEYVLRLLPKGTHDYAK 190 Query: 181 FITPAELARFIREAGLELDGFKGLSYNPLTKLYSINQDTSVNYMVACRK 229 FITPAELA + R+A L++DGFKG+ YNPLTK+YS+N DTSVNY+VAC K Sbjct: 191 FITPAELAHYTRQADLQIDGFKGMGYNPLTKIYSLNDDTSVNYLVACTK 239 >ref|ZP_08272602.1| 3-demethylubiquinone-9 3-methyltransferase [Oxalobacteraceae bacterium IMCC9480] gb|EGF33932.1| 3-demethylubiquinone-9 3-methyltransferase [Oxalobacteraceae bacterium IMCC9480] Length = 253 Score = 397 bits (1019), Expect = e-109, Method: Compositional matrix adjust. Identities = 177/232 (76%), Positives = 208/232 (89%) Query: 1 MNADPQELQKFSDLAHRWWDPTSEFRPLHEINPLRLEWINARAALSGKSVVDVGCGGGIL 60 MNADPQEL+KFSDLAHRWWDPTSEFRPLH+INPLRLEWINAR L+ K+V+D+GCGGGIL Sbjct: 22 MNADPQELKKFSDLAHRWWDPTSEFRPLHQINPLRLEWINARVPLANKTVLDIGCGGGIL 81 Query: 61 AESMARKGARVTGIDLSEKALKVADLHGMESGIQVRYEKIAAEDLAAREPGQFDVVTCME 120 A+SMARKGA+VTGIDLSEKALKVADLH +E+GI +RYE I+AE++A REP FDVVTCME Sbjct: 82 AQSMARKGAKVTGIDLSEKALKVADLHSLEAGIDMRYEMISAENMAEREPASFDVVTCME 141 Query: 121 MLEHVPDPASIVRACTAMVKPGGHVFFSTLNRNPKAYLFAIIGAEYLLRMLPKGTHDYAK 180 MLEHVPDP +IVRAC +VKPGG +FFSTLNRNPK+YLFAI+GAEY+LR+LPKGTHDY+K Sbjct: 142 MLEHVPDPEAIVRACATLVKPGGKIFFSTLNRNPKSYLFAILGAEYILRLLPKGTHDYSK 201 Query: 181 FITPAELARFIREAGLELDGFKGLSYNPLTKLYSINQDTSVNYMVACRKPLS 232 FITPAEL+R+ R A L +DG KG++YNP K YS+N +T VNYMVAC +PL+ Sbjct: 202 FITPAELSRYARVADLNIDGLKGMTYNPFLKSYSLNGNTDVNYMVACTRPLA 253 >ref|YP_001100827.1| bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase [Herminiimonas arsenicoxydans] emb|CAL62706.1| 3-demethylubiquinone-9 3-methyltransferase (3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase) (DHHB methyltransferase) [Herminiimonas arsenicoxydans] Length = 231 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 179/230 (77%), Positives = 207/230 (90%) Query: 1 MNADPQELQKFSDLAHRWWDPTSEFRPLHEINPLRLEWINARAALSGKSVVDVGCGGGIL 60 MNADP EL+KFSDLAH+WWDPTSEFRPLHEINPLRLEWIN+ A L+ K+V+D+GCGGGIL Sbjct: 1 MNADPLELKKFSDLAHQWWDPTSEFRPLHEINPLRLEWINSLAPLAAKTVIDIGCGGGIL 60 Query: 61 AESMARKGARVTGIDLSEKALKVADLHGMESGIQVRYEKIAAEDLAAREPGQFDVVTCME 120 +ESMARKGA VTGIDLSEKALKVADLH +ESG+QVRYE IAAED+AARE G+FD+VTCME Sbjct: 61 SESMARKGANVTGIDLSEKALKVADLHSLESGVQVRYELIAAEDMAAREAGKFDIVTCME 120 Query: 121 MLEHVPDPASIVRACTAMVKPGGHVFFSTLNRNPKAYLFAIIGAEYLLRMLPKGTHDYAK 180 MLEHVPDPA+IV A + KPGG +FFST+NRNPKAYL A++GAEYLLR+LPKGTHDYAK Sbjct: 121 MLEHVPDPAAIVAAAAKLAKPGGTIFFSTINRNPKAYLHAVLGAEYLLRLLPKGTHDYAK 180 Query: 181 FITPAELARFIREAGLELDGFKGLSYNPLTKLYSINQDTSVNYMVACRKP 230 FITPAEL+RF REAGL +D +G+ +NPLTK+YS+ DTSVNY+VAC KP Sbjct: 181 FITPAELSRFAREAGLTVDTLRGMGFNPLTKIYSLTHDTSVNYLVACSKP 230