BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0089.p (298 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004754399.1| prephenate dehydrogenase [Collimonas fungivo... 462 e-128 ref|ZP_08274478.1| Cyclohexadienyl dehydrogenase [Oxalobacterace... 436 e-120 ref|YP_003777078.1| prephenate dehydrogenase [Herbaspirillum ser... 428 e-118 ref|YP_001354361.1| prephenate dehydrogenase [Janthinobacterium ... 408 e-112 ref|YP_001100820.1| prephenate dehydrogenase [Herminiimonas arse... 401 e-110 >ref|YP_004754399.1| prephenate dehydrogenase [Collimonas fungivorans Ter331] gb|AEK63576.1| Prephenate dehydrogenase [Collimonas fungivorans Ter331] Length = 299 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 229/297 (77%), Positives = 253/297 (85%) Query: 2 KKIVVFGVGLIGGSFALALKKAGAVAHVVGVGRSEASLSRAKELGIIDEACTSVADAVRD 61 KKI +FGVGLIGGSFALALKKAGAV VVGVGR +L RA+ELGIID SVADAV Sbjct: 3 KKIAIFGVGLIGGSFALALKKAGAVEQVVGVGRQLETLQRAQELGIIDAIAGSVADAVAG 62 Query: 62 ADLILLAAPVAQTGAILESIEPHLQLGTVVTDAGSTKADVVAAARLALGDKVGQFVPGHP 121 A+LIL+AAPVAQTGAIL SI PHLQ GT+VTDAGSTK+DVV AAR LG K+ QFVPGHP Sbjct: 63 AELILIAAPVAQTGAILASIAPHLQAGTIVTDAGSTKSDVVLAARATLGGKIAQFVPGHP 122 Query: 122 IAGREQNGPDAALADLYVGKKTVITALDENAEQDVERVAQAWQACGASIHRLSPQEHDAV 181 IAGREQNGP+AALA+LYVGKK V+ L EN EQD+ RVA AWQ CGA IHRLSPQ+HDAV Sbjct: 123 IAGREQNGPEAALAELYVGKKVVLAPLPENGEQDIARVAAAWQQCGALIHRLSPQQHDAV 182 Query: 182 FASVSHLPHLLAYALVDDIASKPHAPILFQYAASGFRDFTRIAGSSPEMWRDISLANRAA 241 FA+VSHLPH+LAYALVDDIA+KPHA LFQYAASGFRDFTRIAGSSPEMWRDISLAN+AA Sbjct: 183 FAAVSHLPHVLAYALVDDIANKPHAASLFQYAASGFRDFTRIAGSSPEMWRDISLANQAA 242 Query: 242 LLHELDAYLVQLIRMRKLLVERDSDGLEKIYANAQQARHNWTAAIETAERQNKEGGD 298 LL ELDAYL+QL R+R LL D LE +Y+NAQQARH+W +AIE AE+QNKEGGD Sbjct: 243 LLGELDAYLLQLTRLRGLLAAGDGPALEAVYSNAQQARHSWISAIEAAEQQNKEGGD 299 >ref|ZP_08274478.1| Cyclohexadienyl dehydrogenase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32038.1| Cyclohexadienyl dehydrogenase [Oxalobacteraceae bacterium IMCC9480] Length = 302 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 222/298 (74%), Positives = 252/298 (84%) Query: 1 VKKIVVFGVGLIGGSFALALKKAGAVAHVVGVGRSEASLSRAKELGIIDEACTSVADAVR 60 +KK+ +FGVGLIGGSFALAL +AG V + G GRS L RA+ LGIID S +AVR Sbjct: 5 LKKVAIFGVGLIGGSFALALTRAGRVDQIAGFGRSPEVLVRAQALGIIDTISASAEEAVR 64 Query: 61 DADLILLAAPVAQTGAILESIEPHLQLGTVVTDAGSTKADVVAAARLALGDKVGQFVPGH 120 DADL+L+AAPVAQTGAIL +I PHLQ GTVVTDAGSTKADVVAAAR ALGDK+GQF+PGH Sbjct: 65 DADLVLIAAPVAQTGAILRAIAPHLQPGTVVTDAGSTKADVVAAARAALGDKIGQFIPGH 124 Query: 121 PIAGREQNGPDAALADLYVGKKTVITALDENAEQDVERVAQAWQACGASIHRLSPQEHDA 180 PIAGREQNGP+AA+ADLY GKK V+T L EN+ D++RVA AWQACGA IHRLS ++HD Sbjct: 125 PIAGREQNGPEAAIADLYSGKKVVLTTLPENSADDIDRVASAWQACGAQIHRLSAEDHDR 184 Query: 181 VFASVSHLPHLLAYALVDDIASKPHAPILFQYAASGFRDFTRIAGSSPEMWRDISLANRA 240 VFA+VSHLPHLL+YALVDDIA KPHA +LFQYAASGFRDFTRIAGSSPEMWRDISLAN+ Sbjct: 185 VFAAVSHLPHLLSYALVDDIARKPHAELLFQYAASGFRDFTRIAGSSPEMWRDISLANQP 244 Query: 241 ALLHELDAYLVQLIRMRKLLVERDSDGLEKIYANAQQARHNWTAAIETAERQNKEGGD 298 ALL ELDAYL QL +R++LVERD GLE +YANAQQARHNW +AIE AE Q K+GGD Sbjct: 245 ALLGELDAYLDQLQGLRRMLVERDGAGLEAVYANAQQARHNWISAIEAAELQVKQGGD 302 >ref|YP_003777078.1| prephenate dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ65170.1| prephenate dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 295 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 212/291 (72%), Positives = 244/291 (83%) Query: 2 KKIVVFGVGLIGGSFALALKKAGAVAHVVGVGRSEASLSRAKELGIIDEACTSVADAVRD 61 KK+V+FGVGLIGGSFALAL++AG AH+VGVGRS SL RA+ELGIID T A AV+ Sbjct: 3 KKVVIFGVGLIGGSFALALRRAGQAAHIVGVGRSLQSLERARELGIIDAVATDAASAVQG 62 Query: 62 ADLILLAAPVAQTGAILESIEPHLQLGTVVTDAGSTKADVVAAARLALGDKVGQFVPGHP 121 ADLIL+AAPVAQTG IL SI PHL+ +VTDAGSTK+DVVAAAR+ALGD++ QF+P HP Sbjct: 63 ADLILVAAPVAQTGPILASIAPHLEPQAIVTDAGSTKSDVVAAARMALGDRIVQFIPAHP 122 Query: 122 IAGREQNGPDAALADLYVGKKTVITALDENAEQDVERVAQAWQACGASIHRLSPQEHDAV 181 IAGRE++GP+AALA+LY GKK VITAL EN DVE VA AW+ACGA IHRLSPQEHDAV Sbjct: 123 IAGREKHGPEAALAELYEGKKVVITALPENDAADVEIVAAAWRACGAVIHRLSPQEHDAV 182 Query: 182 FASVSHLPHLLAYALVDDIASKPHAPILFQYAASGFRDFTRIAGSSPEMWRDISLANRAA 241 FASVSHLPH+LA+ALVDDIA+KPHA LFQYAASGFRDFTRIA SSPEMWRDI+LANR A Sbjct: 183 FASVSHLPHVLAFALVDDIAAKPHAATLFQYAASGFRDFTRIAASSPEMWRDITLANRDA 242 Query: 242 LLHELDAYLVQLIRMRKLLVERDSDGLEKIYANAQQARHNWTAAIETAERQ 292 LL E+DAYL+QL +R ++ D G+EKIYA+AQ AR W AAIE AER+ Sbjct: 243 LLTEVDAYLLQLQNIRAMIAAGDGPGIEKIYASAQHARQQWAAAIEAAERK 293 >ref|YP_001354361.1| prephenate dehydrogenase [Janthinobacterium sp. Marseille] gb|ABR88315.1| prephenate dehydrogenase [Janthinobacterium sp. Marseille] Length = 291 Score = 408 bits (1049), Expect = e-112, Method: Compositional matrix adjust. Identities = 201/290 (69%), Positives = 235/290 (81%) Query: 9 VGLIGGSFALALKKAGAVAHVVGVGRSEASLSRAKELGIIDEACTSVADAVRDADLILLA 68 +GLIGGSFA AL++AG V +VGVGR+ A L RAK+LGIID A TSV +A+R ADL+LLA Sbjct: 1 MGLIGGSFARALRQAGTVEQIVGVGRTAAVLQRAKDLGIIDVASTSVEEALRGADLVLLA 60 Query: 69 APVAQTGAILESIEPHLQLGTVVTDAGSTKADVVAAARLALGDKVGQFVPGHPIAGREQN 128 APVAQT ILESI+P+LQ GTVVTDAGS K +VVA AR LGDK+ QFVPGHPIAG E N Sbjct: 61 APVAQTAVILESIKPYLQAGTVVTDAGSIKGEVVATARAVLGDKIAQFVPGHPIAGLEAN 120 Query: 129 GPDAALADLYVGKKTVITALDENAEQDVERVAQAWQACGASIHRLSPQEHDAVFASVSHL 188 GP+AA+ DLYVGKK V+T L EN+ DV VAQAWQ CGA IH+L+ + HDAVFA+VSHL Sbjct: 121 GPEAAIPDLYVGKKVVLTPLPENSAADVALVAQAWQQCGAIIHQLTAENHDAVFAAVSHL 180 Query: 189 PHLLAYALVDDIASKPHAPILFQYAASGFRDFTRIAGSSPEMWRDISLANRAALLHELDA 248 PHLLAYALVDDIA+KPHA +LFQYAASGFRDFTRIAGSSPEMWRDISL+N+ A+L ELDA Sbjct: 181 PHLLAYALVDDIANKPHADLLFQYAASGFRDFTRIAGSSPEMWRDISLSNQGAILTELDA 240 Query: 249 YLVQLIRMRKLLVERDSDGLEKIYANAQQARHNWTAAIETAERQNKEGGD 298 Y+ QL R R L D + ++ ++ANAQ+AR NW +IETAE Q K GD Sbjct: 241 YIAQLTRFRAQLAAGDGEAMQAMFANAQRARQNWQRSIETAEPQPKPDGD 290 >ref|YP_001100820.1| prephenate dehydrogenase [Herminiimonas arsenicoxydans] emb|CAL62699.1| Prephenate dehydrogenase (PDH) [Herminiimonas arsenicoxydans] Length = 300 Score = 401 bits (1031), Expect = e-110, Method: Compositional matrix adjust. Identities = 199/298 (66%), Positives = 237/298 (79%) Query: 1 VKKIVVFGVGLIGGSFALALKKAGAVAHVVGVGRSEASLSRAKELGIIDEACTSVADAVR 60 +KKIV+FGVGLIGGSFALAL+KAGAV VVG+GRS ASL RAKELGIID TS+ +A++ Sbjct: 2 LKKIVIFGVGLIGGSFALALRKAGAVEQVVGLGRSTASLLRAKELGIIDVIGTSLEEALQ 61 Query: 61 DADLILLAAPVAQTGAILESIEPHLQLGTVVTDAGSTKADVVAAARLALGDKVGQFVPGH 120 DADL+LLAAPVAQT +IL +I+P+LQ TV+TDAGS K +VVAAAR ALG+K+ QFVPGH Sbjct: 62 DADLVLLAAPVAQTESILAAIKPYLQTQTVITDAGSIKVEVVAAARRALGEKIVQFVPGH 121 Query: 121 PIAGREQNGPDAALADLYVGKKTVITALDENAEQDVERVAQAWQACGASIHRLSPQEHDA 180 PIAG E GPDAA+ LYVG+K V+T L EN + + VA+AWQ CGA IH+L+P+ HDA Sbjct: 122 PIAGLESTGPDAAIDSLYVGRKVVLTPLPENTTEQIALVARAWQQCGAVIHQLTPENHDA 181 Query: 181 VFASVSHLPHLLAYALVDDIASKPHAPILFQYAASGFRDFTRIAGSSPEMWRDISLANRA 240 VFA+VSHLPHLLA+ALVDDIA KPHA +LFQYAASGFRDFTRIA SSPEMWRDISLAN+ Sbjct: 182 VFAAVSHLPHLLAFALVDDIARKPHAELLFQYAASGFRDFTRIAASSPEMWRDISLANQT 241 Query: 241 ALLHELDAYLVQLIRMRKLLVERDSDGLEKIYANAQQARHNWTAAIETAERQNKEGGD 298 A+L ELDAY+ QL R R L D + ++++AQ AR NW IE AE Q + D Sbjct: 242 AILTELDAYIAQLTRFRGQLAAGDGAAMHAMFSHAQSARQNWQRNIEAAEVQPEPEND 299