BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0087.p (220 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777076.1| cytidylate kinase [Herbaspirillum seropedica... 388 e-106 ref|YP_004754396.1| cytidylate kinase [Collimonas fungivorans Te... 361 3e-98 ref|YP_001100818.1| cytidine monophosphate (CMP) kinase [Hermini... 332 2e-89 ref|ZP_08274480.1| Cytidylate kinase [Oxalobacteraceae bacterium... 332 2e-89 ref|YP_001354359.1| cytidylate kinase [Janthinobacterium sp. Mar... 330 7e-89 >ref|YP_003777076.1| cytidylate kinase [Herbaspirillum seropedicae SmR1] gb|ADJ65168.1| cytidylate kinase protein [Herbaspirillum seropedicae SmR1] Length = 222 Score = 388 bits (997), Expect = e-106, Method: Compositional matrix adjust. Identities = 188/220 (85%), Positives = 201/220 (91%) Query: 1 MNTANIPVIAIDGPTASGKGTVAQRVAQQLGFHYLDSGALYRLTALSAIRRGIEMNDEHG 60 M IPVI IDGPTASGKGTVAQ+VAQQLGFHYLDSGALYRLTALS +RRGI +NDEH Sbjct: 1 MEKPKIPVITIDGPTASGKGTVAQKVAQQLGFHYLDSGALYRLTALSVLRRGIALNDEHA 60 Query: 61 LAKSAEHLNCHFDGGHIFLANEDVSQAIRAEEVGNTASKIAVLATVRHALYGLQLSFRKA 120 LAK+AEHL+CHFDG HIFL+NEDV+QAIRAEEVGNTASKIA L TVR ALYGLQLSFRK Sbjct: 61 LAKAAEHLHCHFDGAHIFLSNEDVTQAIRAEEVGNTASKIAALITVRQALYGLQLSFRKP 120 Query: 121 PGLVADGRDMGTVIFPHAPLKVFLTASVEARAQRRYKQLIDKGFPANMEDLSKDLRERDA 180 PGLVADGRDMGTVIFP A LKVFLTASVEARA RRYKQLIDKGF AN+EDLS+DL+ERD Sbjct: 121 PGLVADGRDMGTVIFPGARLKVFLTASVEARATRRYKQLIDKGFSANIEDLSRDLKERDE 180 Query: 181 RDMNRASAPLKPAEGAYLLDTSDMTADEAVKQVLSWYAAL 220 RDM+R+SAPLKPAEGAY LDTSDMTADEAV+QVLSWYAAL Sbjct: 181 RDMSRSSAPLKPAEGAYHLDTSDMTADEAVQQVLSWYAAL 220 >ref|YP_004754396.1| cytidylate kinase [Collimonas fungivorans Ter331] gb|AEK63573.1| Cytidylate kinase [Collimonas fungivorans Ter331] Length = 232 Score = 361 bits (927), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 181/223 (81%), Positives = 191/223 (85%), Gaps = 4/223 (1%) Query: 1 MNTANIPVIAIDGPTASGKGTVAQRVAQQLGFHYLDSGALYRLTALSAIRRG----IEMN 56 M+ IPVI IDGPTASGKGTVAQRVAQ LGFHYLDSGALYRLTALS +RR I ++ Sbjct: 1 MSNPPIPVITIDGPTASGKGTVAQRVAQHLGFHYLDSGALYRLTALSVMRRANGNPIPLD 60 Query: 57 DEHGLAKSAEHLNCHFDGGHIFLANEDVSQAIRAEEVGNTASKIAVLATVRHALYGLQLS 116 DEH LAK+AEHL+CHF G HIFLANEDVS IRAE VGN ASKIA + TVR ALYGLQLS Sbjct: 61 DEHALAKAAEHLHCHFSGAHIFLANEDVSNDIRAEAVGNLASKIAAIPTVRQALYGLQLS 120 Query: 117 FRKAPGLVADGRDMGTVIFPHAPLKVFLTASVEARAQRRYKQLIDKGFPANMEDLSKDLR 176 FR+ PGLVADGRDMGTVIFPHA LKVFLTASVEARA RRYKQLIDKGF ANMEDLSKDL Sbjct: 121 FRQHPGLVADGRDMGTVIFPHAGLKVFLTASVEARALRRYKQLIDKGFSANMEDLSKDLT 180 Query: 177 ERDARDMNRASAPLKPAEGAYLLDTSDMTADEAVKQVLSWYAA 219 ERDARD NR+SAPLK AEGAYLLDTS MTAD+AV QVL WYAA Sbjct: 181 ERDARDSNRSSAPLKAAEGAYLLDTSAMTADQAVAQVLEWYAA 223 >ref|YP_001100818.1| cytidine monophosphate (CMP) kinase [Herminiimonas arsenicoxydans] emb|CAL62697.1| Cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase) [Herminiimonas arsenicoxydans] Length = 229 Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 165/213 (77%), Positives = 177/213 (83%) Query: 6 IPVIAIDGPTASGKGTVAQRVAQQLGFHYLDSGALYRLTALSAIRRGIEMNDEHGLAKSA 65 IPVIAIDGPTASGKGTVAQ VA QLGFHYLDSGALYRLTALSA+R + +NDE LAK A Sbjct: 11 IPVIAIDGPTASGKGTVAQLVATQLGFHYLDSGALYRLTALSALRNAVALNDEQALAKLA 70 Query: 66 EHLNCHFDGGHIFLANEDVSQAIRAEEVGNTASKIAVLATVRHALYGLQLSFRKAPGLVA 125 E L C F G IFLA E+V+ AIRAEEVGN ASKIA L +R AL LQL FR APGL+A Sbjct: 71 ETLQCSFTNGDIFLAGENVTLAIRAEEVGNAASKIAALPALRQALVALQLRFRTAPGLIA 130 Query: 126 DGRDMGTVIFPHAPLKVFLTASVEARAQRRYKQLIDKGFPANMEDLSKDLRERDARDMNR 185 DGRDMGTVIFP A LKVFLTAS EARAQRRYKQLIDKGF ANM+DL KDL ERDARD NR Sbjct: 131 DGRDMGTVIFPDADLKVFLTASPEARAQRRYKQLIDKGFSANMQDLLKDLNERDARDANR 190 Query: 186 ASAPLKPAEGAYLLDTSDMTADEAVKQVLSWYA 218 A APLKPAEGAYLLDTS++T +AV+QVL WYA Sbjct: 191 AVAPLKPAEGAYLLDTSNLTVHQAVEQVLGWYA 223 >ref|ZP_08274480.1| Cytidylate kinase [Oxalobacteraceae bacterium IMCC9480] gb|EGF32040.1| Cytidylate kinase [Oxalobacteraceae bacterium IMCC9480] Length = 231 Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 165/219 (75%), Positives = 179/219 (81%) Query: 1 MNTANIPVIAIDGPTASGKGTVAQRVAQQLGFHYLDSGALYRLTALSAIRRGIEMNDEHG 60 M IPVI IDGPTASGKGTVA VA +LG HYLDSGALYRLTALSA+R+ IE DEHG Sbjct: 1 MPLTTIPVITIDGPTASGKGTVAHLVAVRLGLHYLDSGALYRLTALSAMRKHIEPTDEHG 60 Query: 61 LAKSAEHLNCHFDGGHIFLANEDVSQAIRAEEVGNTASKIAVLATVRHALYGLQLSFRKA 120 LAK+A LNCHF+G H+FL+NEDVS AIRAEEVGN AS+IA L TVR ALY LQL FR Sbjct: 61 LAKAAAGLNCHFNGEHVFLSNEDVSAAIRAEEVGNLASRIATLPTVRQALYALQLGFRSP 120 Query: 121 PGLVADGRDMGTVIFPHAPLKVFLTASVEARAQRRYKQLIDKGFPANMEDLSKDLRERDA 180 PGLVADGRDMGTVIFP A LKVFLTAS EARA+RR+KQLI KG A M DL KDL ERDA Sbjct: 121 PGLVADGRDMGTVIFPRATLKVFLTASAEARAERRFKQLIAKGMSATMHDLLKDLNERDA 180 Query: 181 RDMNRASAPLKPAEGAYLLDTSDMTADEAVKQVLSWYAA 219 RD NR APLKPAE AYLL+TS+MTA+ AV QVL+WYAA Sbjct: 181 RDANRTIAPLKPAEDAYLLETSNMTAEAAVTQVLAWYAA 219 >ref|YP_001354359.1| cytidylate kinase [Janthinobacterium sp. Marseille] gb|ABR89225.1| cytidylate kinase [Janthinobacterium sp. Marseille] Length = 225 Score = 330 bits (847), Expect = 7e-89, Method: Compositional matrix adjust. Identities = 163/215 (75%), Positives = 180/215 (83%) Query: 6 IPVIAIDGPTASGKGTVAQRVAQQLGFHYLDSGALYRLTALSAIRRGIEMNDEHGLAKSA 65 IPVI IDGPTASGKGTVAQ VA +LGFHYLDSGALYRLTALSA+ RGI ++DE +AKS Sbjct: 9 IPVITIDGPTASGKGTVAQLVATELGFHYLDSGALYRLTALSALYRGIAIDDEQAVAKSV 68 Query: 66 EHLNCHFDGGHIFLANEDVSQAIRAEEVGNTASKIAVLATVRHALYGLQLSFRKAPGLVA 125 E LNC F G IFL E+V+ +IRAEEVGNTASKIA L VR AL LQL FR+APGL+A Sbjct: 69 ETLNCGFKDGDIFLDRENVTMSIRAEEVGNTASKIAALPAVRKALVDLQLRFREAPGLIA 128 Query: 126 DGRDMGTVIFPHAPLKVFLTASVEARAQRRYKQLIDKGFPANMEDLSKDLRERDARDMNR 185 DGRDMGTVIFP A LKVFLTAS EARA+RRYKQLIDKGF AN+EDL KDL ERDARD NR Sbjct: 129 DGRDMGTVIFPDAKLKVFLTASAEARAERRYKQLIDKGFSANIEDLLKDLNERDARDANR 188 Query: 186 ASAPLKPAEGAYLLDTSDMTADEAVKQVLSWYAAL 220 A APLKPAE AYLLDTS++T +AV QVL+WYAA+ Sbjct: 189 AIAPLKPAEEAYLLDTSNLTVQQAVDQVLAWYAAV 223