BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0070.p (363 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08874764.1| hypothetical protein VeAt4_19705 [Verminephro... 479 e-133 ref|YP_003775708.1| hypothetical protein Hsero_2301 [Herbaspiril... 431 e-119 ref|YP_004126540.1| hypothetical protein Alide_1909 [Alicycliphi... 425 e-117 ref|YP_004387996.1| hypothetical protein Alide2_2108 [Alicycliph... 424 e-116 ref|YP_002497545.1| hypothetical protein Mnod_2262 [Methylobacte... 380 e-103 >ref|ZP_08874764.1| hypothetical protein VeAt4_19705 [Verminephrobacter sp. At4] Length = 358 Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust. Identities = 231/360 (64%), Positives = 279/360 (77%), Gaps = 22/360 (6%) Query: 17 MLSVMLALAGCAAS----------PTERSYEVAEVGSFHVGGKQVTLAGLPSREIVFTEG 66 +L+ MLA +GCA+ P +R V EVGSFHVGG+QVTL+GLP +E+VF+ G Sbjct: 8 VLAAMLA-SGCASQQQQGGQSRMPPADRVVVVKEVGSFHVGGRQVTLSGLPEKELVFSAG 66 Query: 67 AASRKVDPNGDFETGQMYAQYIKLK--NPRARYPLLMWHGGGLAGTTWETKPDGAPGWQQ 124 AA R+V+PNGDFE GQMY QYI+L + + RYPLLMWHGGGL+G TWE+KPDG PGWQ Sbjct: 67 AAPRRVNPNGDFEVGQMYVQYIRLDAASRKGRYPLLMWHGGGLSGVTWESKPDGQPGWQS 126 Query: 125 FFLTQGHSVYVTDAVERGXGHSVYVTDASWSRYPEVYKTEPFFRTKQEGWELFRIGAAGS 184 FFL GH VYV+DAVERG ASW+RYPE+++TEP FRTKQE WELFRIG GS Sbjct: 127 FFLQAGHDVYVSDAVERGR--------ASWARYPEIFETEPVFRTKQEAWELFRIGPPGS 178 Query: 185 YDSDPAKRVAYA-GTQFPVAAYDQFSKQGIPRWASNDAATQAAYDALVQKVCPCVIVVHS 243 Y +DP KR +A GTQFPV A+DQF+KQGIPRWASNDAATQAAYD VQKVCPCVIVVHS Sbjct: 179 YATDPGKRQVFAQGTQFPVEAFDQFTKQGIPRWASNDAATQAAYDQYVQKVCPCVIVVHS 238 Query: 244 QGGNFAINAALRAPDKIKAIVAVEGSGAPDPDKVDISALKNIPFLFVWGDFIDQNTSWKQ 303 QGGNFA NAALRAPDKI+ +VA+E SG+PDP+KVD+SALK IPFLF+WGD++D+ T W + Sbjct: 239 QGGNFAFNAALRAPDKIRGVVAIEPSGSPDPEKVDLSALKGIPFLFIWGDYLDRATLWTR 298 Query: 304 YIVAPDKFRRALRAQGGVADRLDLPQHGIKGNSHMLMMDRNSDQVAALVQAWMDKNGLMK 363 ++F +AL+ QG A R+DLP+ G+ GNSHMLMMDRNSD++A VQ W+ GL + Sbjct: 299 ASQTLERFEKALQQQGTDATRIDLPKLGVHGNSHMLMMDRNSDEIAQRVQNWLVAKGLSR 358 >ref|YP_003775708.1| hypothetical protein Hsero_2301 [Herbaspirillum seropedicae SmR1] gb|ADJ63800.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 353 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 211/352 (59%), Positives = 255/352 (72%), Gaps = 14/352 (3%) Query: 15 ASMLSVMLALAGCAASPTERS---YEVAEVGSFHVGGKQVTLAGLPSREIVFTEGAASRK 71 A L+ ++ LAGC +ER+ VAEVGSFH+GG+Q TL GLP++E+ FT + + Sbjct: 8 ALTLAGLILLAGCTTPASERAQAPVAVAEVGSFHIGGRQATLDGLPAKEVRFTPTSPLTR 67 Query: 72 VDPNGDFETGQMYAQYIKLKNP--RARYPLLMWHGGGLAGTTWETKPDGAPGWQQFFLTQ 129 +DPNG+FE GQMY QY++L RA YPLLMWHGGGL+G TWE+ PDG PGWQ FFL Sbjct: 68 IDPNGEFEVGQMYVQYVRLAPAARRAPYPLLMWHGGGLSGVTWESTPDGRPGWQMFFLRA 127 Query: 130 GHSVYVTDAVERGXGHSVYVTDASWSRYPEVYKTEPFFRTKQEGWELFRIGAAGSYDSDP 189 GH VYV+DAVERG ASW+RYPE+Y++EP FRTK+E WELFRIG AGSY D Sbjct: 128 GHDVYVSDAVERGR--------ASWARYPELYRSEPVFRTKKEAWELFRIGPAGSY-QDA 178 Query: 190 AKRVAYAGTQFPVAAYDQFSKQGIPRWASNDAATQAAYDALVQKVCPCVIVVHSQGGNFA 249 A R AY TQFPVAA+DQF KQG+PRW +NDAAT+AAYDALVQ+VCPCV++VHSQG FA Sbjct: 179 AHRSAYPDTQFPVAAFDQFMKQGVPRWLTNDAATEAAYDALVQRVCPCVLMVHSQGSTFA 238 Query: 250 INAALRAPDKIKAIVAVEGSGAPDPDKVDISALKNIPFLFVWGDFIDQNTSWKQYIVAPD 309 A R P+KIKA+V VE SGA DPDKVD++ L +P LFVWGD I W+ Sbjct: 239 YTLANRYPEKIKAVVGVEPSGALDPDKVDLTPLSRVPLLFVWGDKIAATPRWQGIQAPMK 298 Query: 310 KFRRALRAQGGVADRLDLPQHGIKGNSHMLMMDRNSDQVAALVQAWMDKNGL 361 K AL+A+GG AD +DLP GI GNSH++MMD NSDQ+AALVQ W+ GL Sbjct: 299 KMIAALKAKGGRADEIDLPARGISGNSHLMMMDANSDQIAALVQDWLVAQGL 350 >ref|YP_004126540.1| hypothetical protein Alide_1909 [Alicycliphilus denitrificans BC] gb|ADU99652.1| hypothetical protein Alide_1909 [Alicycliphilus denitrificans BC] Length = 355 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 206/343 (60%), Positives = 246/343 (71%), Gaps = 16/343 (4%) Query: 26 GCAASPT-----ERSYEVAEVGSFHVGGKQVTLAGLPSREIVFTEGAASRKVDPNGDFET 80 GCA +P + VAE+GSFH GG+ VTL+GLP +E+ FT + +DPNG+FE Sbjct: 19 GCAGAPIAPVAGQGPVAVAEIGSFHTGGRSVTLSGLPKKEVRFTPTSPPTLLDPNGEFEV 78 Query: 81 GQMYAQYIKL--KNPRARYPLLMWHGGGLAGTTWETKPDGAPGWQQFFLTQGHSVYVTDA 138 QMY QY+KL ++ RARYP+LMWHGGGL G TWETKPDG PGWQ +F+ GH VYV+DA Sbjct: 79 EQMYTQYVKLAPQSRRARYPMLMWHGGGLTGVTWETKPDGQPGWQMYFVAAGHDVYVSDA 138 Query: 139 VERGXGHSVYVTDASWSRYPEVYKTEPFFRTKQEGWELFRIGAAGSYDSDPAKRVAYAGT 198 VERG ASW+RYPE++K+EP FRTK+EGWELFRIG A SYDS A R AY T Sbjct: 139 VERGR--------ASWARYPEIFKSEPVFRTKKEGWELFRIGPADSYDSA-ASRHAYPDT 189 Query: 199 QFPVAAYDQFSKQGIPRWASNDAATQAAYDALVQKVCPCVIVVHSQGGNFAINAALRAPD 258 QFP+AA+DQF KQG+PRW +ND T AYDALV KVCPCVI VHSQG FA A R PD Sbjct: 190 QFPIAAFDQFMKQGVPRWVTNDEPTLRAYDALVNKVCPCVITVHSQGSTFAYTLASRYPD 249 Query: 259 KIKAIVAVEGSGAPDPDKVDISALKNIPFLFVWGDFIDQNTSWKQYIVAPDKFRRALRAQ 318 KIKA+V VE SGA DPDKVD++ L +P LFVWGD I + W+ K A++A+ Sbjct: 250 KIKAVVGVEPSGALDPDKVDVAPLARVPLLFVWGDKIRETPRWQSIQAPMKKMIAAVKAR 309 Query: 319 GGVADRLDLPQHGIKGNSHMLMMDRNSDQVAALVQAWMDKNGL 361 GG D +DLP GI+GNSHM+MMDRNSDQVAALVQ W+ + GL Sbjct: 310 GGQVDEIDLPAQGIRGNSHMIMMDRNSDQVAALVQDWLVRRGL 352 >ref|YP_004387996.1| hypothetical protein Alide2_2108 [Alicycliphilus denitrificans K601] gb|AEB84480.1| hypothetical protein Alide2_2108 [Alicycliphilus denitrificans K601] Length = 355 Score = 424 bits (1090), Expect = e-116, Method: Compositional matrix adjust. Identities = 210/344 (61%), Positives = 249/344 (72%), Gaps = 18/344 (5%) Query: 26 GCAASPT-----ERSYEVAEVGSFHVGGKQVTLAGLPSREIVFTEGAASRKVDPNGDFET 80 GCA +P + VAE+GSFH GG+ VTL+GLP +E+ FT + +DPNG+FE Sbjct: 19 GCAGAPIAPVAGQGPVAVAEIGSFHTGGRSVTLSGLPKKEVRFTPTSPPTLLDPNGEFEV 78 Query: 81 GQMYAQYIKL--KNPRARYPLLMWHGGGLAGTTWETKPDGAPGWQQFFLTQGHSVYVTDA 138 QMY QY+KL ++ RARYP+LMWHGGGL G TWETKPDG PGWQ +F+ GH VYV+DA Sbjct: 79 EQMYTQYVKLAPQSRRARYPMLMWHGGGLTGVTWETKPDGQPGWQMYFVAAGHDVYVSDA 138 Query: 139 VERGXGHSVYVTDASWSRYPEVYKTEPFFRTKQEGWELFRIGAAGSYDSDPAKRVAYAGT 198 VERG ASW+RYPE++K+EP FRTK+EGWELFRIG A SYDS A R AY T Sbjct: 139 VERGR--------ASWARYPEIFKSEPVFRTKKEGWELFRIGPADSYDSA-ASRHAYPDT 189 Query: 199 QFPVAAYDQFSKQGIPRWASNDAATQAAYDALVQKVCPCVIVVHSQGGNFAINAALRAPD 258 QFP+AA+DQF KQG+PRW +ND T AYDALV KVCPCVI VHSQG FA A R PD Sbjct: 190 QFPIAAFDQFMKQGVPRWVTNDEPTLRAYDALVNKVCPCVITVHSQGSTFAYTLASRYPD 249 Query: 259 KIKAIVAVEGSGAPDPDKVDISALKNIPFLFVWGDFIDQNTSWKQYIVAP-DKFRRALRA 317 KIKA+V VE SGA DPDKVD++ L +P LFVWGD I + W Q I AP K A++A Sbjct: 250 KIKAVVGVEPSGALDPDKVDVAPLARVPLLFVWGDKIRETPRW-QGIQAPMKKMIAAVKA 308 Query: 318 QGGVADRLDLPQHGIKGNSHMLMMDRNSDQVAALVQAWMDKNGL 361 +GG D +DLP GI+GNSHM+MMDRNSDQVAALVQ W+ + GL Sbjct: 309 RGGQVDEIDLPAQGIRGNSHMIMMDRNSDQVAALVQDWLVRRGL 352 >ref|YP_002497545.1| hypothetical protein Mnod_2262 [Methylobacterium nodulans ORS 2060] gb|ACL57242.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 340 Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust. Identities = 182/326 (55%), Positives = 232/326 (71%), Gaps = 11/326 (3%) Query: 38 VAEVGSFHVGGKQVTLAGLPSREIVFTEGAASRKVDPNGDFETGQMYAQYIKLKNPRARY 97 + E GSFHVGG+QV+L+G P E VFT+GAA +VDPNGDFE QMY QY+ + RA Y Sbjct: 26 LKEFGSFHVGGRQVSLSGYPVTESVFTQGAAPTRVDPNGDFEVEQMYVQYLIPEPQRAMY 85 Query: 98 PLLMWHGGGLAGTTWETKPDGAPGWQQFFLTQGHSVYVTDAVERGXGHSVYVTDASWSRY 157 PLLMWHGGGL G TW+TKPDG PG+ Q+F GH +YV+DAVERG ASW+RY Sbjct: 86 PLLMWHGGGLTGVTWDTKPDGQPGFMQYFFRAGHPIYVSDAVERGR--------ASWARY 137 Query: 158 PEVYKTEPFFRTKQEGWELFRIGAAGSYDSDPAKRVAYAGTQFPVAAYDQFSKQGIPRWA 217 PE+YKT PFFRTK+E WE FRIG Y +DP++R A G +FPV A+D+F+KQ +PRW Sbjct: 138 PEIYKTAPFFRTKKEAWEQFRIGPI--YATDPSERAAMPGGKFPVQAFDRFAKQFVPRWT 195 Query: 218 SNDAATQAAYDALVQKVCPCVIVVHSQGGNFAINAALRAPDKIKAIVAVEGSGAPDPDKV 277 SND TQ AYDAL+QKV P V++VHSQ GNF +AAL APDK+KA++A+E +GAP P Sbjct: 196 SNDGITQRAYDALIQKVGPAVVMVHSQAGNFGFHAALNAPDKVKALIAIEPAGAPAPGP- 254 Query: 278 DISALKNIPFLFVWGDFIDQNTSWKQYIVAPDKFRRALRAQGGVADRLDLPQHGIKGNSH 337 D+ L IP L +WGD I++ W + KF L+A+GG + ++LP+ GI GN H Sbjct: 255 DLDRLTAIPMLIIWGDNIEREPVWVRQQPFSLKFAADLKARGGDVEVIELPKVGITGNDH 314 Query: 338 MLMMDRNSDQVAALVQAWMDKNGLMK 363 M+MMD NSDQ+A L++ WM + GL + Sbjct: 315 MIMMDTNSDQIAGLIEDWMKRKGLTQ 340