BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0069.p (420 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003777063.1| acyl-CoA transferases/carnitine dehydratase ... 721 0.0 ref|YP_001099355.1| putative Formyl-CoA transferase [Herminiimon... 706 0.0 ref|ZP_08274879.1| CAIB/BAIF family protein [Oxalobacteraceae ba... 698 0.0 ref|NP_883539.1| hypothetical protein BPP1224 [Bordetella parape... 634 e-180 ref|NP_887987.1| hypothetical protein BB1441 [Bordetella bronchi... 633 e-179 >ref|YP_003777063.1| acyl-CoA transferases/carnitine dehydratase [Herbaspirillum seropedicae SmR1] gb|ADJ65155.1| acyl-CoA transferases/carnitine dehydratase protein [Herbaspirillum seropedicae SmR1] Length = 415 Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/420 (84%), Positives = 378/420 (90%), Gaps = 5/420 (1%) Query: 1 MTTTTPSPGPLAGIKVLELGTLIAGPFCSRMLAEFXFFSFGADVIKVEAPGVGDPLRQWR 60 MTT T PGPLAGIKVLELGTLIAGPFCSRMLAEF GADVIKVEAPG GDPLRQWR Sbjct: 1 MTTGTSKPGPLAGIKVLELGTLIAGPFCSRMLAEF-----GADVIKVEAPGNGDPLRQWR 55 Query: 61 VLKDGTSLWWSVQARNKKSLTLNMKDPQAQDIARKLALEADIIIENYRPGVLEKWNLGYE 120 VLKDGTSLWWSVQARNKKS+TLNMKD +AQ+IARKLALEAD+IIENYRPGVLEKW LGYE Sbjct: 56 VLKDGTSLWWSVQARNKKSITLNMKDERAQEIARKLALEADVIIENYRPGVLEKWKLGYE 115 Query: 121 DLKKLNPAIIMVRLSGYGQTGPLKDLPGFGAIGESMGGIRYVSGHQDRPPVRIGISIGDS 180 DLK+LNPA IMVRLSGYGQTGPL+DLPGFGAIGESMGGIRYVSGH DRPPVRIGISIGDS Sbjct: 116 DLKQLNPATIMVRLSGYGQTGPLRDLPGFGAIGESMGGIRYVSGHPDRPPVRIGISIGDS 175 Query: 181 VAALHGVIGAMMALRHRDVTGGRWNGKDGELRVAGQGQMVDVALYESVFNLMESLVPEFD 240 +AALHGVIGAMMALRHRDVTGGRWNGK G VAGQGQMVDVALYE+VFN+MES+VPEFD Sbjct: 176 IAALHGVIGAMMALRHRDVTGGRWNGKQGADCVAGQGQMVDVALYEAVFNMMESMVPEFD 235 Query: 241 QAGVVRERTGGALPGIVPSNTYTTADGKNVVIAGNGDAIFKRLMLAIDRADMANDPQLER 300 AGVVRERTGGALPGIVPSNTYTT +G N+VIAGNGDAIFKRLM AI R DMANDP L R Sbjct: 236 FAGVVRERTGGALPGIVPSNTYTTGEGMNIVIAGNGDAIFKRLMSAIGREDMANDPGLAR 295 Query: 301 NDGRVPRTEEIDRAIQAWCSGKTIDEALAILQAADVPVGKIYSVRDMMSDPQFLARNMFE 360 NDGRVPRTEEID AIQ WCS +TI+ ALA LQAADVPVGKIYSV+DMM+D QFLAR+MFE Sbjct: 296 NDGRVPRTEEIDAAIQQWCSTQTIETALATLQAADVPVGKIYSVKDMMNDAQFLARDMFE 355 Query: 361 QHAFADGTPIKLPAVTPKLSETPGGTKWIGPELGQHNAEILRSLGYDDAQIAQLRQDKVI 420 QH FADGTP+KLP +TPK+SETPG TKW+GPELG H+ EIL+SLGYD+A I LR V+ Sbjct: 356 QHQFADGTPVKLPGITPKMSETPGQTKWLGPELGAHSDEILQSLGYDEAHIKMLRDQGVV 415 >ref|YP_001099355.1| putative Formyl-CoA transferase [Herminiimonas arsenicoxydans] emb|CAL61228.1| putative CoA-transferase family III [Herminiimonas arsenicoxydans] Length = 414 Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/418 (82%), Positives = 375/418 (89%), Gaps = 5/418 (1%) Query: 3 TTTPSPGPLAGIKVLELGTLIAGPFCSRMLAEFXFFSFGADVIKVEAPGVGDPLRQWRVL 62 T T S GPLAGIKVLELGTLIAGPFCSRMLAEF GADVIK+E+P GDP+RQWRVL Sbjct: 2 TKTSSSGPLAGIKVLELGTLIAGPFCSRMLAEF-----GADVIKIESPDGGDPIRQWRVL 56 Query: 63 KDGTSLWWSVQARNKKSLTLNMKDPQAQDIARKLALEADIIIENYRPGVLEKWNLGYEDL 122 KDGTSLWWSVQARNKKSLTLN+KDP+ Q IA+KLALEADIIIENYRPGVLEKW+LGYE L Sbjct: 57 KDGTSLWWSVQARNKKSLTLNLKDPRGQQIAKKLALEADIIIENYRPGVLEKWSLGYEQL 116 Query: 123 KKLNPAIIMVRLSGYGQTGPLKDLPGFGAIGESMGGIRYVSGHQDRPPVRIGISIGDSVA 182 K NPA IMVRLSG+GQTGPLKD PGFGAIGESMGG+RYVSG DRPP+RIGISIGDSVA Sbjct: 117 KAENPATIMVRLSGFGQTGPLKDQPGFGAIGESMGGMRYVSGFPDRPPLRIGISIGDSVA 176 Query: 183 ALHGVIGAMMALRHRDVTGGRWNGKDGELRVAGQGQMVDVALYESVFNLMESLVPEFDQA 242 ALHGVIGAMMALRHRD TGGRWNGK G VAGQGQM+DVALYE+VFN+MESLVPE+D A Sbjct: 177 ALHGVIGAMMALRHRDATGGRWNGKSGAECVAGQGQMIDVALYEAVFNMMESLVPEYDYA 236 Query: 243 GVVRERTGGALPGIVPSNTYTTADGKNVVIAGNGDAIFKRLMLAIDRADMANDPQLERND 302 GVVRERTGGALPGIVPSNTYTT DG+N+VIAGNGDAIFKRLMLA+ R D+AND QL RND Sbjct: 237 GVVRERTGGALPGIVPSNTYTTGDGENIVIAGNGDAIFKRLMLAMGRDDLANDAQLARND 296 Query: 303 GRVPRTEEIDRAIQAWCSGKTIDEALAILQAADVPVGKIYSVRDMMSDPQFLARNMFEQH 362 GRVPRT EID AIQAWC+ +TID A+AILQAADVP GKIYSVRDMM+DPQFLAR MFEQH Sbjct: 297 GRVPRTAEIDGAIQAWCATQTIDSAMAILQAADVPAGKIYSVRDMMNDPQFLARKMFEQH 356 Query: 363 AFADGTPIKLPAVTPKLSETPGGTKWIGPELGQHNAEILRSLGYDDAQIAQLRQDKVI 420 FADGTPIKLPA+TPKLSETPG TKW+GP LG+H ++L++LGYDDA IA+LR+D V+ Sbjct: 357 TFADGTPIKLPAITPKLSETPGETKWLGPALGEHTDDVLKTLGYDDAGIAELRRDGVV 414 >ref|ZP_08274879.1| CAIB/BAIF family protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF31648.1| CAIB/BAIF family protein [Oxalobacteraceae bacterium IMCC9480] Length = 415 Score = 698 bits (1802), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/408 (83%), Positives = 366/408 (89%), Gaps = 5/408 (1%) Query: 13 GIKVLELGTLIAGPFCSRMLAEFXFFSFGADVIKVEAPGVGDPLRQWRVLKDGTSLWWSV 72 GIKVLELGTLIAGPFC+RML EF GADVIK+EAP GDPLRQWRVLKDGTSLWWSV Sbjct: 13 GIKVLELGTLIAGPFCARMLGEF-----GADVIKIEAPDGGDPLRQWRVLKDGTSLWWSV 67 Query: 73 QARNKKSLTLNMKDPQAQDIARKLALEADIIIENYRPGVLEKWNLGYEDLKKLNPAIIMV 132 QARNKKSLTLN+KDP+AQDIAR+LAL+ADIIIENYRPGVLEKW LGYE LK +NPA IMV Sbjct: 68 QARNKKSLTLNLKDPRAQDIARRLALDADIIIENYRPGVLEKWQLGYEQLKAINPAAIMV 127 Query: 133 RLSGYGQTGPLKDLPGFGAIGESMGGIRYVSGHQDRPPVRIGISIGDSVAALHGVIGAMM 192 RLSGYGQTGP+KDLPGFGAI ESMGG+RYVSGH DRPPVR+GISIGDSVAA+HGVIGAMM Sbjct: 128 RLSGYGQTGPMKDLPGFGAIAESMGGLRYVSGHADRPPVRVGISIGDSVAAMHGVIGAMM 187 Query: 193 ALRHRDVTGGRWNGKDGELRVAGQGQMVDVALYESVFNLMESLVPEFDQAGVVRERTGGA 252 ALRHRD +GGRWNGK G+ VAGQGQMVDVALYESVFNLMESLVPEFD AGVVRERTGGA Sbjct: 188 ALRHRDASGGRWNGKTGDDCVAGQGQMVDVALYESVFNLMESLVPEFDHAGVVRERTGGA 247 Query: 253 LPGIVPSNTYTTADGKNVVIAGNGDAIFKRLMLAIDRADMANDPQLERNDGRVPRTEEID 312 LPGIVPSNTYTT DG N+VIAGNGDAIFKRLM+AI R+DMA+DPQL RNDGRVPRT EID Sbjct: 248 LPGIVPSNTYTTGDGDNIVIAGNGDAIFKRLMVAIGRSDMASDPQLARNDGRVPRTAEID 307 Query: 313 RAIQAWCSGKTIDEALAILQAADVPVGKIYSVRDMMSDPQFLARNMFEQHAFADGTPIKL 372 AIQAWCS +TID ALA LQ ADVPV KIYSVRDM+ DPQFLAR MFEQHAFADGTP+KL Sbjct: 308 GAIQAWCSTQTIDVALATLQGADVPVSKIYSVRDMLHDPQFLARQMFEQHAFADGTPVKL 367 Query: 373 PAVTPKLSETPGGTKWIGPELGQHNAEILRSLGYDDAQIAQLRQDKVI 420 PA++PKLS TPG T+W+GP LG HNAE+L LG+D A IAQLR D VI Sbjct: 368 PAISPKLSATPGQTRWLGPALGAHNAEVLGDLGFDAAAIAQLRDDGVI 415 >ref|NP_883539.1| hypothetical protein BPP1224 [Bordetella parapertussis 12822] emb|CAE36526.1| conserved hypothetical protein [Bordetella parapertussis] Length = 416 Score = 634 bits (1636), Expect = e-180, Method: Compositional matrix adjust. Identities = 312/416 (75%), Positives = 351/416 (84%), Gaps = 11/416 (2%) Query: 11 LAGIKVLELGTLIAGPFCSRMLAEFXFFSFGADVIKVEAP------GVGDPLRQWRVLKD 64 L G+KVLELGTLIAGPF +RM EF GA+VIKVE P G GDP+R WR L Sbjct: 4 LKGLKVLELGTLIAGPFAARMFGEF-----GAEVIKVETPHGPDGTGGGDPIRSWRHLHR 58 Query: 65 GTSLWWSVQARNKKSLTLNMKDPQAQDIARKLALEADIIIENYRPGVLEKWNLGYEDLKK 124 G SLWW+VQARNK+S+ LN+KDP+AQ+IAR+LALEAD+++ENYRPGVLEKW LGYE L+ Sbjct: 59 GDSLWWTVQARNKQSIALNLKDPRAQEIARRLALEADVVVENYRPGVLEKWGLGYEQLRA 118 Query: 125 LNPAIIMVRLSGYGQTGPLKDLPGFGAIGESMGGIRYVSGHQDRPPVRIGISIGDSVAAL 184 +NPA IMVRLSGYGQTGPL+DLPGFGAIGESMGG+RYVSGH DRPPVR+GISI DS+AAL Sbjct: 119 INPATIMVRLSGYGQTGPLRDLPGFGAIGESMGGLRYVSGHPDRPPVRVGISIADSLAAL 178 Query: 185 HGVIGAMMALRHRDVTGGRWNGKDGELRVAGQGQMVDVALYESVFNLMESLVPEFDQAGV 244 HGVIGA+MALRHRD TGGRWNG GE AGQGQMVDVALYESVFN+MESLVPE+D AGV Sbjct: 179 HGVIGALMALRHRDATGGRWNGATGEQCQAGQGQMVDVALYESVFNMMESLVPEYDVAGV 238 Query: 245 VRERTGGALPGIVPSNTYTTADGKNVVIAGNGDAIFKRLMLAIDRADMANDPQLERNDGR 304 VRERTGGALPGIVPSNTYTT DG+N+VIAGNGDAIF RLMLAI R+D+A+DPQLERNDGR Sbjct: 239 VRERTGGALPGIVPSNTYTTRDGQNIVIAGNGDAIFHRLMLAIGRSDLAHDPQLERNDGR 298 Query: 305 VPRTEEIDRAIQAWCSGKTIDEALAILQAADVPVGKIYSVRDMMSDPQFLARNMFEQHAF 364 R EID AIQ WC TI++ALA L+AADVPVGKIYSV DM +DPQFLAR M EQH F Sbjct: 299 ARRATEIDSAIQRWCDTHTIEQALATLRAADVPVGKIYSVADMFTDPQFLARGMIEQHHF 358 Query: 365 ADGTPIKLPAVTPKLSETPGGTKWIGPELGQHNAEILRSLGYDDAQIAQLRQDKVI 420 DG+P+KLPAV PKLSETPGGT+W+GP LG+H E+LRSLGYD A IA+L Q I Sbjct: 359 PDGSPVKLPAVVPKLSETPGGTRWLGPRLGEHTEEVLRSLGYDAAAIAELAQTGAI 414 >ref|NP_887987.1| hypothetical protein BB1441 [Bordetella bronchiseptica RB50] emb|CAE31939.1| conserved hypothetical protein [Bordetella bronchiseptica RB50] Length = 416 Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust. Identities = 311/416 (74%), Positives = 352/416 (84%), Gaps = 11/416 (2%) Query: 11 LAGIKVLELGTLIAGPFCSRMLAEFXFFSFGADVIKVEAP------GVGDPLRQWRVLKD 64 L G+KVLELGTLIAGPF +RM EF GA+VIKVE P G GDP+R WR L Sbjct: 4 LKGLKVLELGTLIAGPFAARMFGEF-----GAEVIKVETPHGPDGTGGGDPIRSWRHLHR 58 Query: 65 GTSLWWSVQARNKKSLTLNMKDPQAQDIARKLALEADIIIENYRPGVLEKWNLGYEDLKK 124 G SLWW+VQARNK+S+ LN+KDP+AQ+IAR+LALEAD+++ENYRPGVLEKW LGYE L+ Sbjct: 59 GDSLWWTVQARNKQSIALNLKDPRAQEIARRLALEADVVVENYRPGVLEKWGLGYEQLRA 118 Query: 125 LNPAIIMVRLSGYGQTGPLKDLPGFGAIGESMGGIRYVSGHQDRPPVRIGISIGDSVAAL 184 +NPA IMVRLSGYGQTGPL+DLPGFGAIGESMGG+RYVSGH DRPPVR+GISIGDS+AAL Sbjct: 119 INPATIMVRLSGYGQTGPLRDLPGFGAIGESMGGLRYVSGHPDRPPVRVGISIGDSLAAL 178 Query: 185 HGVIGAMMALRHRDVTGGRWNGKDGELRVAGQGQMVDVALYESVFNLMESLVPEFDQAGV 244 HGVIGA+MALRHRD TGGRWNG GE AGQGQMVDVALYESVFN+MESLVPE+D AGV Sbjct: 179 HGVIGALMALRHRDATGGRWNGATGEQCQAGQGQMVDVALYESVFNMMESLVPEYDVAGV 238 Query: 245 VRERTGGALPGIVPSNTYTTADGKNVVIAGNGDAIFKRLMLAIDRADMANDPQLERNDGR 304 VRERTGGALPGIVPSNTYTT DG+N+VIAGNGDAIF RLMLAI R+D+A+DPQLERNDGR Sbjct: 239 VRERTGGALPGIVPSNTYTTRDGQNIVIAGNGDAIFHRLMLAIGRSDLAHDPQLERNDGR 298 Query: 305 VPRTEEIDRAIQAWCSGKTIDEALAILQAADVPVGKIYSVRDMMSDPQFLARNMFEQHAF 364 R EID AIQ WC TI++ALA L+AADVPVGKIYSV DM +DPQFLAR M EQH F Sbjct: 299 ARRATEIDSAIQRWCDTHTIEQALATLRAADVPVGKIYSVADMFTDPQFLARGMIEQHHF 358 Query: 365 ADGTPIKLPAVTPKLSETPGGTKWIGPELGQHNAEILRSLGYDDAQIAQLRQDKVI 420 DG+P+KLPAV PKLSETPGGT+W+GP LG+H E+L++LGYD A IA+L Q I Sbjct: 359 PDGSPVKLPAVVPKLSETPGGTRWLGPRLGEHTEEVLKALGYDAAAIAELAQTGAI 414