BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0051.p (380 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776853.1| branched-chain amino acid ABC transporter pe... 695 0.0 ref|YP_001099059.1| putative amino acid ABC transporter [Hermini... 570 e-160 ref|YP_001352355.1| ABC-type branched-chain amino acid transport... 560 e-157 ref|ZP_08273712.1| putative amino acid ABC transporter [Oxalobac... 558 e-157 ref|YP_004751556.1| leucine-, isoleucine-, valine-, threonine-, ... 555 e-156 >ref|YP_003776853.1| branched-chain amino acid ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64945.1| ABC-type branched-chain amino acid transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 380 Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/380 (90%), Positives = 360/380 (94%) Query: 1 MKLKSTIIPLTGAIALAFAGAAYSQEVIKIAHVGPLSGPNAHMGKDNENGARMAIDELNA 60 MKLKS IIPLT AI LAFAGAAYSQEV+KIAHVGPLSGPNAHMGKDNENGARMA+DELNA Sbjct: 1 MKLKSAIIPLTAAIGLAFAGAAYSQEVVKIAHVGPLSGPNAHMGKDNENGARMAVDELNA 60 Query: 61 KGFMIGGKKVKFELIGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYNDA 120 KGF IGGKKVKFEL+GEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIY+DA Sbjct: 61 KGFTIGGKKVKFELVGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYSDA 120 Query: 121 GIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGAVLGKYAVTALKTKNVAVIDDRTAYGQ 180 GIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGA LGKYAV L TK +AVIDDRTAYGQ Sbjct: 121 GIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGAALGKYAVQKLGTKQIAVIDDRTAYGQ 180 Query: 181 GVAEEFAKGAQGAGATIVGKQFTNDKATDFNAILTSIKAKKPEVVFFGGMDAVGGPMLRQ 240 GVA+EFAKGA+ AG TIVG Q+TNDKATDFNAILTS+K KKP+VVFFGGMDAVGGPMLRQ Sbjct: 181 GVADEFAKGAKAAGGTIVGTQYTNDKATDFNAILTSLKGKKPDVVFFGGMDAVGGPMLRQ 240 Query: 241 MKQLGITAKFMGGDGICTGSLPGLAGDGLIDDQVVCAEAGGVDESGKKGMDDFRAAYKKK 300 MKQLGI+AKFMGGDGICTGSLPGLAGDGL DDQV+CAEAGGVDE+GKKGMDDFRAAYKKK Sbjct: 241 MKQLGISAKFMGGDGICTGSLPGLAGDGLGDDQVICAEAGGVDEAGKKGMDDFRAAYKKK 300 Query: 301 FGIDVVYNAAYAYDATLTVADAMKKANSADPAKYLPELAKISHKGVTGTIAFDAKGDIKN 360 FGIDVVYNAAYAYDAT+TVADAM KA SADP KYLPELAKISHKGVTG IAFDAKGDIK+ Sbjct: 301 FGIDVVYNAAYAYDATMTVADAMAKAGSADPKKYLPELAKISHKGVTGVIAFDAKGDIKD 360 Query: 361 GSLTLYTYKKGERTLLAVVK 380 GSLTLYTYK G+RTLLAV K Sbjct: 361 GSLTLYTYKGGQRTLLAVTK 380 >ref|YP_001099059.1| putative amino acid ABC transporter [Herminiimonas arsenicoxydans] emb|CAL60932.1| putative ABC-type branched-chain amino acid transport system, periplasmic component [Herminiimonas arsenicoxydans] Length = 381 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 289/381 (75%), Positives = 334/381 (87%), Gaps = 1/381 (0%) Query: 1 MKLKSTIIPLTGAIALAFAGAAYSQE-VIKIAHVGPLSGPNAHMGKDNENGARMAIDELN 59 M+ KS +IPL GA+A A AG A +QE VIKI V P++G +AHMGKDNENGARMA+++LN Sbjct: 1 MQFKSKMIPLAGALAFALAGGAAAQEQVIKIGSVAPITGTDAHMGKDNENGARMAVEDLN 60 Query: 60 AKGFMIGGKKVKFELIGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYND 119 AKG IGGKKVKF+L+ EDDASDPKQATA A KLVD V AVIGHLNSGTTIPAS+IY + Sbjct: 61 AKGTTIGGKKVKFQLLAEDDASDPKQATAAAQKLVDAGVVAVIGHLNSGTTIPASRIYAN 120 Query: 120 AGIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGAVLGKYAVTALKTKNVAVIDDRTAYG 179 AGIPQVSPSATNPKYTQQGFKTAFRVVANDAQLG VLG+YAV L K+VAVIDDRTAYG Sbjct: 121 AGIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGQVLGQYAVKTLGGKSVAVIDDRTAYG 180 Query: 180 QGVAEEFAKGAQGAGATIVGKQFTNDKATDFNAILTSIKAKKPEVVFFGGMDAVGGPMLR 239 QGVA+EFAKG + AG +IV Q+TN+KATDFN+ILTSIKAKKP+++FFGGMDAVGGPMLR Sbjct: 181 QGVADEFAKGVKAAGGSIVASQYTNNKATDFNSILTSIKAKKPDIIFFGGMDAVGGPMLR 240 Query: 240 QMKQLGITAKFMGGDGICTGSLPGLAGDGLIDDQVVCAEAGGVDESGKKGMDDFRAAYKK 299 QMKQLGI AKFMGGDGICTGSLPGLAG L D+QVVCAEAGGV E+ +KG++DFRA+YKK Sbjct: 241 QMKQLGINAKFMGGDGICTGSLPGLAGTALGDNQVVCAEAGGVPEARRKGVEDFRASYKK 300 Query: 300 KFGIDVVYNAAYAYDATLTVADAMKKANSADPAKYLPELAKISHKGVTGTIAFDAKGDIK 359 +FG++VVY AAYAYDAT V +AMKKANS +PAKYLPELAK ++ G+TGTIAFDAKGDIK Sbjct: 301 RFGVEVVYTAAYAYDATNAVVEAMKKANSWEPAKYLPELAKSNYPGITGTIAFDAKGDIK 360 Query: 360 NGSLTLYTYKKGERTLLAVVK 380 +G+LTLYT++ G+R +LAV K Sbjct: 361 DGTLTLYTFRGGKREMLAVTK 381 >ref|YP_001352355.1| ABC-type branched-chain amino acid transport systems, periplasmic component [Janthinobacterium sp. Marseille] gb|ABR89836.1| ABC-type branched-chain amino acid transport systems, periplasmic component [Janthinobacterium sp. Marseille] Length = 381 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 284/381 (74%), Positives = 332/381 (87%), Gaps = 1/381 (0%) Query: 1 MKLKSTIIPLTGAIALAFAGAAYSQE-VIKIAHVGPLSGPNAHMGKDNENGARMAIDELN 59 M+ K+ +IPLTGA+ LA AG+ +QE ++KI HVGP++G +AHMGKDNENGAR+A++ELN Sbjct: 1 MQFKTKMIPLTGAVLLALAGSTLAQEQIVKIGHVGPVTGTDAHMGKDNENGARLAVEELN 60 Query: 60 AKGFMIGGKKVKFELIGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYND 119 AKG +I GKKVK + + EDDA+DPKQATA ATKLVD VA VIGHLNSG TIPAS+IY + Sbjct: 61 AKGVVINGKKVKLQYMPEDDAADPKQATAAATKLVDSNVAVVIGHLNSGATIPASRIYAN 120 Query: 120 AGIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGAVLGKYAVTALKTKNVAVIDDRTAYG 179 AGI Q+SPS+T+PKYTQQGFKTAFRVVANDAQLG VLG+YAV +L KNVAVIDDRTAYG Sbjct: 121 AGIVQISPSSTSPKYTQQGFKTAFRVVANDAQLGRVLGQYAVKSLAAKNVAVIDDRTAYG 180 Query: 180 QGVAEEFAKGAQGAGATIVGKQFTNDKATDFNAILTSIKAKKPEVVFFGGMDAVGGPMLR 239 QGVAEEFAKG + AG T+V Q+TN+KATDFNAILT+IKAKKP+V+FFGGMDAVGGPML+ Sbjct: 181 QGVAEEFAKGVKAAGGTVVASQYTNNKATDFNAILTAIKAKKPDVIFFGGMDAVGGPMLQ 240 Query: 240 QMKQLGITAKFMGGDGICTGSLPGLAGDGLIDDQVVCAEAGGVDESGKKGMDDFRAAYKK 299 QMKQLGI AKFMGGDGICTGSLPGLAG GL ++ V CAEAGGV+++ K G+D FRAAYKK Sbjct: 241 QMKQLGINAKFMGGDGICTGSLPGLAGAGLGENNVYCAEAGGVEDARKAGLDKFRAAYKK 300 Query: 300 KFGIDVVYNAAYAYDATLTVADAMKKANSADPAKYLPELAKISHKGVTGTIAFDAKGDIK 359 +FGIDV+Y AAYAYDAT V DAM+KA S + AKYLPEL KIS+ GVTGTIAFDAKGDIK Sbjct: 301 RFGIDVIYTAAYAYDATYAVVDAMQKAKSWESAKYLPELTKISYPGVTGTIAFDAKGDIK 360 Query: 360 NGSLTLYTYKKGERTLLAVVK 380 +G+LTLYTY+ G+RT LAVVK Sbjct: 361 DGTLTLYTYRGGKRTELAVVK 381 >ref|ZP_08273712.1| putative amino acid ABC transporter [Oxalobacteraceae bacterium IMCC9480] gb|EGF32816.1| putative amino acid ABC transporter [Oxalobacteraceae bacterium IMCC9480] Length = 383 Score = 558 bits (1438), Expect = e-157, Method: Compositional matrix adjust. Identities = 288/383 (75%), Positives = 322/383 (84%), Gaps = 3/383 (0%) Query: 1 MKLKSTIIPLTGAIALAFAGAAYSQE-VIKIAHVGPLSGPNAHMGKDNENGARMAIDELN 59 M+ + +IPL A+A AFAG A +QE VIKI HVGP+SG AH+GKDNENGA+MAIDELN Sbjct: 1 MQFNTKMIPLAAALAFAFAGTASAQEQVIKIGHVGPISGAIAHLGKDNENGAKMAIDELN 60 Query: 60 AKGFMIGGKKVKFELIGEDDASDPKQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYND 119 AKG +IGGKKVKFEL+ EDDA+DPKQ TAVA KLVD KV VIGHLNSGTTIPASKIY + Sbjct: 61 AKGVVIGGKKVKFELLAEDDAADPKQGTAVAQKLVDAKVNGVIGHLNSGTTIPASKIYYE 120 Query: 120 AGIPQVSPSATNPKYTQQGFKTAFRVVANDAQLGAVLGKYAVTALKTKNVAVIDDRTAYG 179 AGIPQ+SPSATNPKYTQQGFKTAFRVVAND QLG LG+YAV LK K VAVIDDRTAYG Sbjct: 121 AGIPQISPSATNPKYTQQGFKTAFRVVANDGQLGGTLGRYAVQVLKAKRVAVIDDRTAYG 180 Query: 180 QGVAEEFAKGAQG--AGATIVGKQFTNDKATDFNAILTSIKAKKPEVVFFGGMDAVGGPM 237 QGVAEEF KGA+G G IV Q+TNDKATDFNAILTSIK+K P+VVFFGGMDAV GPM Sbjct: 181 QGVAEEFIKGAKGKSTGVEIVATQYTNDKATDFNAILTSIKSKNPDVVFFGGMDAVAGPM 240 Query: 238 LRQMKQLGITAKFMGGDGICTGSLPGLAGDGLIDDQVVCAEAGGVDESGKKGMDDFRAAY 297 LRQMKQLGI AKFMGGDGICT +L LAGD + D+QVVCAEAGGV+++ KKGM+DF+AAY Sbjct: 241 LRQMKQLGINAKFMGGDGICTEALATLAGDAMADNQVVCAEAGGVEDAQKKGMEDFKAAY 300 Query: 298 KKKFGIDVVYNAAYAYDATLTVADAMKKANSADPAKYLPELAKISHKGVTGTIAFDAKGD 357 KKKFG+DV A Y YD+ +T+ DAM KA SADPAKY P LAKI HKGVTG IAFD KGD Sbjct: 301 KKKFGVDVQIYAPYVYDSVMTMVDAMVKAGSADPAKYAPVLAKIQHKGVTGNIAFDDKGD 360 Query: 358 IKNGSLTLYTYKKGERTLLAVVK 380 IK+G+LTLY+YK G+R LAVVK Sbjct: 361 IKDGTLTLYSYKGGKRLQLAVVK 383 >ref|YP_004751556.1| leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein [Collimonas fungivorans Ter331] gb|AEK60733.1| Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein [Collimonas fungivorans Ter331] Length = 383 Score = 555 bits (1429), Expect = e-156, Method: Compositional matrix adjust. Identities = 264/357 (73%), Positives = 307/357 (85%) Query: 24 SQEVIKIAHVGPLSGPNAHMGKDNENGARMAIDELNAKGFMIGGKKVKFELIGEDDASDP 83 ++++KI HVGP++GP+AH+GKD ENGA+MA++ELNAKG +GGKK+KF L+ EDDASDP Sbjct: 27 EEQIVKIGHVGPVTGPSAHLGKDMENGAKMAVEELNAKGITLGGKKIKFVLLAEDDASDP 86 Query: 84 KQATAVATKLVDQKVAAVIGHLNSGTTIPASKIYNDAGIPQVSPSATNPKYTQQGFKTAF 143 KQ TA A KLVD K+ VIGHLNSGTTIPASKIY DAGIPQ+SP+AT+PKYTQQGF + F Sbjct: 87 KQGTAAAQKLVDAKIDGVIGHLNSGTTIPASKIYYDAGIPQISPAATSPKYTQQGFNSVF 146 Query: 144 RVVANDAQLGAVLGKYAVTALKTKNVAVIDDRTAYGQGVAEEFAKGAQGAGATIVGKQFT 203 RVVAND QLG LG+YA T LK KN+AVIDDRTAYGQGVA+EFAKGA+ AG IV QFT Sbjct: 147 RVVANDGQLGGTLGRYAATTLKAKNIAVIDDRTAYGQGVAQEFAKGAKSAGVNIVATQFT 206 Query: 204 NDKATDFNAILTSIKAKKPEVVFFGGMDAVGGPMLRQMKQLGITAKFMGGDGICTGSLPG 263 NDKATDFNAILTSIKAK P+V+FFGGMDAV GPMLRQMK LGI AKFMGGDG+CT L Sbjct: 207 NDKATDFNAILTSIKAKNPDVIFFGGMDAVAGPMLRQMKALGIKAKFMGGDGMCTAELGK 266 Query: 264 LAGDGLIDDQVVCAEAGGVDESGKKGMDDFRAAYKKKFGIDVVYNAAYAYDATLTVADAM 323 LAGDGLI+DQVVCAEAGGV+ESGKKG++DF+AA++KKF +V A Y+YD+ +T+ +AM Sbjct: 267 LAGDGLINDQVVCAEAGGVEESGKKGLEDFKAAFQKKFNAEVKLYAPYSYDSVMTMVEAM 326 Query: 324 KKANSADPAKYLPELAKISHKGVTGTIAFDAKGDIKNGSLTLYTYKKGERTLLAVVK 380 +KANSADP KYLPEL KI HKGVTG IAFDAKGDIK+G+LTLYTYK G+RTLL V K Sbjct: 327 QKANSADPKKYLPELVKIHHKGVTGMIAFDAKGDIKDGTLTLYTYKDGKRTLLTVTK 383