BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0050.p         (169 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776852.1| transcription regulator protein [Herbaspiril...   329   1e-88
ref|YP_001352356.1| AsnC family transcriptional regulator [Janth...   310   6e-83
ref|YP_004751558.1| putative transcriptional regulator [Collimon...   306   5e-82
ref|ZP_08274998.1| putative transcriptional regulator (AsnC fami...   304   3e-81
ref|YP_001099060.1| putative transcriptional regulator [Herminii...   304   3e-81

>ref|YP_003776852.1| transcription regulator protein [Herbaspirillum seropedicae SmR1]
 gb|ADJ64944.1| transcription regulator protein [Herbaspirillum seropedicae SmR1]
          Length = 170

 Score =  329 bits (843), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 155/166 (93%), Positives = 163/166 (98%)

Query: 3   KYHTLDKVDRKLLNLLQKDNQIPTRILAEKLHISQPTCLRRIRELREAGIINAEVAMVDP 62
           K+HTLDKVDRKLLN+LQKDNQI TR+LAEKLHISQPTCLRRIR+LREAGII+AEVAMVDP
Sbjct: 4   KHHTLDKVDRKLLNMLQKDNQISTRVLAEKLHISQPTCLRRIRDLREAGIISAEVAMVDP 63

Query: 63  FALGYGMLAFLEISLNNQSDEHMQEFEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDMDAY 122
           FALGYGMLAFLEISLNNQSD+HMQ+FEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDMDAY
Sbjct: 64  FALGYGMLAFLEISLNNQSDQHMQDFEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDMDAY 123

Query: 123 YQFVRRVISGSGNVRHFQSRFPMKRAKFATRIAFDEKAAEIQVRVP 168
           YQFVRRVISGSGNVRHFQSRFPMKRAKF TRIAFDEKAAE+ VRVP
Sbjct: 124 YQFVRRVISGSGNVRHFQSRFPMKRAKFTTRIAFDEKAAEVLVRVP 169


>ref|YP_001352356.1| AsnC family transcriptional regulator [Janthinobacterium sp.
           Marseille]
 gb|ABR90223.1| transcriptional regulator, AsnC family [Janthinobacterium sp.
           Marseille]
          Length = 169

 Score =  310 bits (793), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 142/167 (85%), Positives = 156/167 (93%)

Query: 1   MPKYHTLDKVDRKLLNLLQKDNQIPTRILAEKLHISQPTCLRRIRELREAGIINAEVAMV 60
           M K HTLDKVDRKLLNLLQKDNQ PTR LA+K+HISQPTCLRRIR++R+AGII+A+VAM+
Sbjct: 1   MSKLHTLDKVDRKLLNLLQKDNQTPTRTLADKVHISQPTCLRRIRDMRDAGIISADVAMI 60

Query: 61  DPFALGYGMLAFLEISLNNQSDEHMQEFEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDMD 120
           DPFALGYGMLAFLE+SL NQSDEHMQEFE RM KEAEVMQCYFVSG+YDYFL VHV+DMD
Sbjct: 61  DPFALGYGMLAFLEVSLGNQSDEHMQEFEVRMGKEAEVMQCYFVSGDYDYFLVVHVVDMD 120

Query: 121 AYYQFVRRVISGSGNVRHFQSRFPMKRAKFATRIAFDEKAAEIQVRV 167
           AYYQFVRR ISGSGNVRHFQSRFPMKRAKF TRIAFDEK+A +QVR+
Sbjct: 121 AYYQFVRRAISGSGNVRHFQSRFPMKRAKFDTRIAFDEKSAAVQVRI 167


>ref|YP_004751558.1| putative transcriptional regulator [Collimonas fungivorans Ter331]
 gb|AEK60735.1| putative transcriptional regulator (AsnC familiy) [Collimonas
           fungivorans Ter331]
          Length = 169

 Score =  306 bits (785), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 141/169 (83%), Positives = 159/169 (94%)

Query: 1   MPKYHTLDKVDRKLLNLLQKDNQIPTRILAEKLHISQPTCLRRIRELREAGIINAEVAMV 60
           M K+HTLDKVDRKLLNLLQ+DNQ+PTR LA+K HISQPTCLRR+R+LR+AGII+A+V++V
Sbjct: 1   MSKHHTLDKVDRKLLNLLQRDNQMPTRTLADKAHISQPTCLRRLRDLRDAGIISADVSLV 60

Query: 61  DPFALGYGMLAFLEISLNNQSDEHMQEFEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDMD 120
           DPFALGYGMLAFLEISLN+QSDEHMQEFE RM KEAEVMQCYFVSG+YDYFL VHVIDMD
Sbjct: 61  DPFALGYGMLAFLEISLNHQSDEHMQEFELRMNKEAEVMQCYFVSGDYDYFLVVHVIDMD 120

Query: 121 AYYQFVRRVISGSGNVRHFQSRFPMKRAKFATRIAFDEKAAEIQVRVPE 169
           AYYQFVRRVISGSGNVRHFQSRFPMKRAKF TR+AFDEK A ++VR+ +
Sbjct: 121 AYYQFVRRVISGSGNVRHFQSRFPMKRAKFVTRVAFDEKPATVEVRIAK 169


>ref|ZP_08274998.1| putative transcriptional regulator (AsnC familiy) [Oxalobacteraceae
           bacterium IMCC9480]
 gb|EGF31520.1| putative transcriptional regulator (AsnC familiy) [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 169

 Score =  304 bits (779), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 142/166 (85%), Positives = 152/166 (91%)

Query: 1   MPKYHTLDKVDRKLLNLLQKDNQIPTRILAEKLHISQPTCLRRIRELREAGIINAEVAMV 60
           MPK + LDKVDRKLLNLLQKDNQ PTR LAEK HISQPTCLRR+R+LR AGIINA+VA+V
Sbjct: 1   MPKIYALDKVDRKLLNLLQKDNQTPTRTLAEKTHISQPTCLRRLRDLRAAGIINADVALV 60

Query: 61  DPFALGYGMLAFLEISLNNQSDEHMQEFEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDMD 120
           DPFALGYGMLAFLEISL NQSDE MQEFE RM KEAEVMQCYFVSG++DYFL  HVIDMD
Sbjct: 61  DPFALGYGMLAFLEISLTNQSDECMQEFETRMGKEAEVMQCYFVSGDFDYFLVAHVIDMD 120

Query: 121 AYYQFVRRVISGSGNVRHFQSRFPMKRAKFATRIAFDEKAAEIQVR 166
           AYYQFVRRVISGSGNVRHFQSRFPMKR+KF TRIAFDEK+ E+QVR
Sbjct: 121 AYYQFVRRVISGSGNVRHFQSRFPMKRSKFVTRIAFDEKSLEVQVR 166


>ref|YP_001099060.1| putative transcriptional regulator [Herminiimonas arsenicoxydans]
 emb|CAL60933.1| putative Bacterial regulatory proteins, AsnC/Lrp [Herminiimonas
           arsenicoxydans]
          Length = 169

 Score =  304 bits (779), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 140/167 (83%), Positives = 155/167 (92%)

Query: 1   MPKYHTLDKVDRKLLNLLQKDNQIPTRILAEKLHISQPTCLRRIRELREAGIINAEVAMV 60
           M K HTLDKVDRKLLNLLQKDNQIPTRILA+K+HISQPTCLRRIR++R+AGII+A+VAM+
Sbjct: 1   MSKLHTLDKVDRKLLNLLQKDNQIPTRILADKVHISQPTCLRRIRDMRDAGIISADVAMI 60

Query: 61  DPFALGYGMLAFLEISLNNQSDEHMQEFEQRMAKEAEVMQCYFVSGEYDYFLAVHVIDMD 120
           DPFALGYGMLAFLE+SL NQSDEHM EFE RM +E EVMQCYFVSG+YDYFL VHV+DMD
Sbjct: 61  DPFALGYGMLAFLEVSLANQSDEHMLEFETRMNREPEVMQCYFVSGDYDYFLVVHVVDMD 120

Query: 121 AYYQFVRRVISGSGNVRHFQSRFPMKRAKFATRIAFDEKAAEIQVRV 167
           AYYQFVRR ISGSGNVRHFQSRFPMKRAKF TRIA DEK +E+QVR+
Sbjct: 121 AYYQFVRRAISGSGNVRHFQSRFPMKRAKFDTRIALDEKVSELQVRI 167