BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0048.p         (140 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776851.1| Kef-type K+ transport system, membrane compo...   235   2e-60
ref|YP_004751953.1| putative sodium/proton antiporter [Collimona...   168   3e-40
ref|YP_794007.1| putative sodium/proton antiporter [Pseudomonas ...   144   4e-33
ref|ZP_07797328.1| putative sodium/proton antiporter [Pseudomona...   144   5e-33
ref|YP_004472196.1| sodium/hydrogen exchanger [Pseudomonas fulva...   140   7e-32

>ref|YP_003776851.1| Kef-type K+ transport system, membrane component protein
           [Herbaspirillum seropedicae SmR1]
 gb|ADJ64943.1| Kef-type K+ transport system, membrane component protein
           [Herbaspirillum seropedicae SmR1]
          Length = 587

 Score =  235 bits (599), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 116/140 (82%), Positives = 130/140 (92%)

Query: 1   VDGIGGRLSTWIGDEQVRKAVIWGGALVLSLPFLIATYRKLQALAMLLAEVGVKPEFAGA 60
           VDG+  +LS W  D  V+KA+IWG ALVLSLPFLIATYRKLQAL+MLLAEV VKPEFAGA
Sbjct: 448 VDGLSRQLSGWTPDPDVQKAIIWGCALVLSLPFLIATYRKLQALSMLLAEVSVKPEFAGA 507

Query: 61  YTSGVRRVISEVIPVMSILGIMLLIFVLSASILPPLNLLAFVLLGAAGLLWLLWSKLVKL 120
           YTSGVR+++SEV+P+MSI+GIMLLIFVLSASILPPLNLLAFVL GAAGLLWLLWSKLVKL
Sbjct: 508 YTSGVRKIVSEVLPIMSIVGIMLLIFVLSASILPPLNLLAFVLAGAAGLLWLLWSKLVKL 567

Query: 121 HSRLQIALFETLDEKPEDSH 140
           HSRLQIALFETLDE+P+D+H
Sbjct: 568 HSRLQIALFETLDEQPDDAH 587


>ref|YP_004751953.1| putative sodium/proton antiporter [Collimonas fungivorans Ter331]
 gb|AEK61130.1| putative sodium/proton antiporter [Collimonas fungivorans Ter331]
          Length = 615

 Score =  168 bits (425), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 85/139 (61%), Positives = 116/139 (83%)

Query: 2   DGIGGRLSTWIGDEQVRKAVIWGGALVLSLPFLIATYRKLQALAMLLAEVGVKPEFAGAY 61
           + +G  +S W+ D QV+ A++WGGAL++SLPFLIATYRKL AL+MLLAE+ VKPE+AG+Y
Sbjct: 477 EALGNSMSAWVADAQVQNAIVWGGALLISLPFLIATYRKLHALSMLLAEISVKPEWAGSY 536

Query: 62  TSGVRRVISEVIPVMSILGIMLLIFVLSASILPPLNLLAFVLLGAAGLLWLLWSKLVKLH 121
           +  VRRV++EVIPV+SI+GIML+I  LS+ ILPP NLL  VL+ AA L+ +LW + VKLH
Sbjct: 537 SHAVRRVVAEVIPVVSIIGIMLMIAALSSRILPPTNLLILVLVAAAALVLVLWQRFVKLH 596

Query: 122 SRLQIALFETLDEKPEDSH 140
           S+LQIAL ETL+++P+++H
Sbjct: 597 SKLQIALRETLEQQPDENH 615


>ref|YP_794007.1| putative sodium/proton antiporter [Pseudomonas aeruginosa
           UCBPP-PA14]
 gb|ABJ14916.1| putative sodium/proton antiporter [Pseudomonas aeruginosa
           UCBPP-PA14]
          Length = 585

 Score =  144 bits (364), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 77/139 (55%), Positives = 108/139 (77%), Gaps = 1/139 (0%)

Query: 2   DGIGGRLSTWIGDEQVRKAVIWGGALVLSLPFLIATYRKLQALAMLLAEVGVKPEFAGAY 61
           D +   +S W+  + + KA+IWGGAL++SL FLIA YRKL+AL+MLLAE+GVKPE AG +
Sbjct: 448 DTLSAWMSQWVAYDGLHKALIWGGALLVSLAFLIAAYRKLKALSMLLAELGVKPEKAGRH 507

Query: 62  TSGVRRVISEVIPVMSILGIMLLIFVLSASILPPLNLLAFVLLGAAGLLWLLWSKLVKLH 121
           T+ VRRVISE+IP++S+ G+M+L+  LS+SILPP  LL  V L A  ++ +LW  L+++H
Sbjct: 508 TARVRRVISEIIPLLSLAGMMVLLAALSSSILPPGELLIVVALVAGLVIAVLWRWLIRVH 567

Query: 122 SRLQIALFETLDEKPEDSH 140
           SR+QIAL ETLD++ + SH
Sbjct: 568 SRMQIALMETLDQE-KGSH 585


>ref|ZP_07797328.1| putative sodium/proton antiporter [Pseudomonas aeruginosa 39016]
 gb|EFQ42424.1| putative sodium/proton antiporter [Pseudomonas aeruginosa 39016]
 dbj|BAK93113.1| putative sodium/proton antiporter [Pseudomonas aeruginosa NCGM2.S1]
          Length = 585

 Score =  144 bits (362), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 78/139 (56%), Positives = 107/139 (76%), Gaps = 1/139 (0%)

Query: 2   DGIGGRLSTWIGDEQVRKAVIWGGALVLSLPFLIATYRKLQALAMLLAEVGVKPEFAGAY 61
           D +   +S W+  + + KA+IWGGAL++SL FLIA YRKL+AL+MLLAE+GVKPE AG +
Sbjct: 448 DTLSAWMSQWVAYDGLHKALIWGGALLVSLAFLIAAYRKLKALSMLLAELGVKPEKAGRH 507

Query: 62  TSGVRRVISEVIPVMSILGIMLLIFVLSASILPPLNLLAFVLLGAAGLLWLLWSKLVKLH 121
           T+ VRRVISEVIP++S+ G+M+L+  LS+SILPP  LL  V L A  ++ +LW  L+++H
Sbjct: 508 TARVRRVISEVIPLLSLAGMMMLLAALSSSILPPGELLIVVALVAGLVIAVLWRWLIRVH 567

Query: 122 SRLQIALFETLDEKPEDSH 140
           SR+QIAL ETL E+ + SH
Sbjct: 568 SRMQIALMETL-EQEKGSH 585


>ref|YP_004472196.1| sodium/hydrogen exchanger [Pseudomonas fulva 12-X]
 gb|AEF20102.1| sodium/hydrogen exchanger [Pseudomonas fulva 12-X]
          Length = 587

 Score =  140 bits (353), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/135 (59%), Positives = 108/135 (80%), Gaps = 1/135 (0%)

Query: 4   IGGRLSTWIGDEQVRKAVIWGGALVLSLPFLIATYRKLQALAMLLAEVGVKPEFAGAYTS 63
           IG  L+ WI  E +RKAVIWG AL+LSLP LIA YRK++AL+MLLAE+GV+ E AG +T+
Sbjct: 450 IGAWLAEWIDQENLRKAVIWGAALILSLPCLIAAYRKIKALSMLLAEMGVRQEKAGRHTA 509

Query: 64  GVRRVISEVIPVMSILGIMLLIFVLSASILPPLNLLAFVLLGAAGLLWLLWSKLVKLHSR 123
            VR+VISEVIP++S++GIM+L+  LS+SILP  ++L  V + AAG++ +LW   +++H+R
Sbjct: 510 RVRKVISEVIPLLSLVGIMVLLTALSSSILPSNDMLLLVGVVAAGVVAVLWRWFIRVHTR 569

Query: 124 LQIALFETLDEKPED 138
           LQIALFETLD KPE 
Sbjct: 570 LQIALFETLD-KPET 583