BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0038.p (1080 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001099385.1| helicase, ATP-dependent [Herminiimonas arsen... 1743 0.0 ref|YP_001352870.1| ATP-dependent helicase [Janthinobacterium sp... 1734 0.0 ref|YP_004752078.1| helicase [Collimonas fungivorans Ter331] >gi... 1727 0.0 ref|YP_003776846.1| ATP-dependent RNA helicase [Herbaspirillum s... 1722 0.0 ref|ZP_08275512.1| macromolecule metabolism; macromolecule synth... 1647 0.0 >ref|YP_001099385.1| helicase, ATP-dependent [Herminiimonas arsenicoxydans] emb|CAL61258.1| ATP-dependent helicase [Herminiimonas arsenicoxydans] Length = 1338 Score = 1743 bits (4514), Expect = 0.0, Method: Compositional matrix adjust. Identities = 842/1029 (81%), Positives = 920/1029 (89%), Gaps = 22/1029 (2%) Query: 1 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER 60 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER Sbjct: 271 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER 330 Query: 61 VFKSSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEAVAQSAAN 120 VFK SNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIE +AQSAAN Sbjct: 331 VFKISNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEPIAQSAAN 390 Query: 121 QRAGRCGRVAAGVCIRLYDEQDYLQRPKFTEPEILRSSLASVILRMKSLHLADVETFPFI 180 QRAGRCGRVAAGVCIRLYDEQDYL RPKFTEPEILRSSLASVILRMKSLHLADVETFPFI Sbjct: 391 QRAGRCGRVAAGVCIRLYDEQDYLLRPKFTEPEILRSSLASVILRMKSLHLADVETFPFI 450 Query: 181 EPPLGRAIADGYQLLQELGAVDEFNQLTPLGNQLAKLPLDPRVGRMILAGRENACLSELL 240 EPPLGRAIADGYQLLQELGAVD+ N+LT LG +LA+LPLDPRVGRMILA ++N CL E+L Sbjct: 451 EPPLGRAIADGYQLLQELGAVDDENRLTKLGRELARLPLDPRVGRMILAAKDNVCLMEVL 510 Query: 241 IIASALSVQDPRDRPMEAQAAADQAHKKFADEKSEFQSYLRIWKWFEEAVEHKKSNRQLQ 300 IIA+ALSVQDPRDRPMEAQAAAD AHKKF DEKSEFQSYL+IWKWFE+A+ HKKSNR LQ Sbjct: 511 IIAAALSVQDPRDRPMEAQAAADNAHKKFVDEKSEFQSYLKIWKWFEDAIAHKKSNRLLQ 570 Query: 301 DHCRANFLSQLRLREWRDVHSQLLTIVREQGWRMNEAPATYEQLHTALLTGLLGNVGFKS 360 + CR +FLSQLRLREWRDVHSQLLTIVREQGWR+NEAPATYEQLHTALLTGLLGN+GFKS Sbjct: 571 EECRTSFLSQLRLREWRDVHSQLLTIVREQGWRLNEAPATYEQLHTALLTGLLGNIGFKS 630 Query: 361 DEDPHYLGARGIKFHIWPGSSLQKKAGKWIVAAELVDTSRLYARCIAQIQPEWLERIGGH 420 +E+ HY+GAR IKFHIWPGSSL KKAGKWI+AAELVDT+RLYARCIAQIQPEWLER+ GH Sbjct: 631 EEEQHYIGARAIKFHIWPGSSLIKKAGKWIMAAELVDTTRLYARCIAQIQPEWLERVAGH 690 Query: 421 LLKKSWGEPRWEKRSAQVTASERATLYGLVVYSQRRINFGLINPQEAREIFIRDALVGGD 480 LLKKS+GEPRWEKR+AQV+A ERATLYGLVVYSQRRI +GLINP +AREIFIRDALVGGD Sbjct: 691 LLKKSYGEPRWEKRTAQVSAYERATLYGLVVYSQRRIQYGLINPADAREIFIRDALVGGD 750 Query: 481 FDTRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIAAFYDKLIPADICNGITFEKWHK 540 FDTRAPFFAHN KL+REIENLEHKSRRLDVLVDDELIAAFYDK+IPADI NGI+FEKWHK Sbjct: 751 FDTRAPFFAHNNKLIREIENLEHKSRRLDVLVDDELIAAFYDKIIPADIHNGISFEKWHK 810 Query: 541 DATAANADPKLLFLNRDDLMRHEAAGVTTELFPKTMTVAGLSMALSYHFEPGTPRDGVTL 600 +ATA +PKLL+LNRDDLMRHEAAGVTTELFPK M VAG+ M LSYHFEPGTPRDGVTL Sbjct: 811 EATA--KEPKLLYLNRDDLMRHEAAGVTTELFPKMMNVAGVEMLLSYHFEPGTPRDGVTL 868 Query: 601 TVPLYALNQVSAARCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFCARMEERH 660 TVPLYALNQVSA RCEWLVPGMLKEKVHLL+KSLPQKLRRHCVPLPDYAAGFC R + H Sbjct: 869 TVPLYALNQVSADRCEWLVPGMLKEKVHLLIKSLPQKLRRHCVPLPDYAAGFCDRAQTAH 928 Query: 661 LFGKGDLIDALIADIREQITIMVKSTDFKQETLPAHHAMNFKIVDEHGRQLEMGRNLGSL 720 FGKG L+DA+IAD+REQ I K+TD+K ETL +H MNFKI+DEHGRQLEMGRNLG+L Sbjct: 929 AFGKGSLLDAVIADVREQTGIATKTTDYKLETLSSHQFMNFKIIDEHGRQLEMGRNLGTL 988 Query: 721 QAEFGGQAREQFQKLAEQTAI----------TGIATPAAATLAATSAKPAAGKTA--AAP 768 ++EFGGQARE FQ++AEQTA+ TG+ +A + A ++ PAA + A Sbjct: 989 RSEFGGQARESFQRIAEQTAMPLAAGLLGQSTGVGKASAIAVKAQASTPAAATQSGKATQ 1048 Query: 769 SGASAASVSEYGNLTNWTFGELPELLEIQRGAVGPNSGKSQTLIGFPALVDKKTHCDLEV 828 AAS + + NLT+WTFGELPELLEIQ+G QTLIGFPALVDK THCDLEV Sbjct: 1049 VAGKAASATTHQNLTSWTFGELPELLEIQQG--------RQTLIGFPALVDKSTHCDLEV 1100 Query: 829 FDDPADAARQHFAGLRRLFALQLKEQLKYQEKNIPGLQQMGMQFMALGSQEELRDQILSA 888 FDDPA+AAR H GLRRL ALQLKEQLKY EKNIPGLQQMGMQFMALGSQEELR+QI++A Sbjct: 1101 FDDPAEAARVHRIGLRRLLALQLKEQLKYLEKNIPGLQQMGMQFMALGSQEELREQIINA 1160 Query: 889 GLERAFMQEPLPKNADEFNRRKEEGKARFGLLVNEIARLAGLVLAEYYTLPKKLQTIKAH 948 GLERA + EPLPKNA+EFN RK+EGK+R GLLVNEIARL GL+L+EY+ LPKKLQT+KAH Sbjct: 1161 GLERACLLEPLPKNAEEFNARKDEGKSRLGLLVNEIARLLGLILSEYHGLPKKLQTVKAH 1220 Query: 949 AQASADIQSQLQNLVGKRFIADSDYNNLMHFPRYLKAINVRLEKLRADPTRDARLLSEWT 1008 AQA DIQSQLQ LV KRF+A++ Y+NL HFPRYLKAINVR++KLRADP RDAR +SEW Sbjct: 1221 AQAVTDIQSQLQGLVSKRFLAETGYSNLTHFPRYLKAINVRIDKLRADPARDARAMSEWQ 1280 Query: 1009 QVAAPWQRA 1017 QVAAPWQRA Sbjct: 1281 QVAAPWQRA 1289 >ref|YP_001352870.1| ATP-dependent helicase [Janthinobacterium sp. Marseille] gb|ABR88983.1| ATP-dependent helicase [Janthinobacterium sp. Marseille] Length = 1319 Score = 1734 bits (4491), Expect = 0.0, Method: Compositional matrix adjust. Identities = 837/1017 (82%), Positives = 913/1017 (89%), Gaps = 14/1017 (1%) Query: 1 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER 60 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLS QEQER Sbjct: 268 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSVQEQER 327 Query: 61 VFKSSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEAVAQSAAN 120 VFK SNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIE +AQSAAN Sbjct: 328 VFKISNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEPIAQSAAN 387 Query: 121 QRAGRCGRVAAGVCIRLYDEQDYLQRPKFTEPEILRSSLASVILRMKSLHLADVETFPFI 180 QRAGRCGRVAAGVCIRLYDEQDYL RPKFTEPEILRSSLASVILRMKSLHL DVETFPFI Sbjct: 388 QRAGRCGRVAAGVCIRLYDEQDYLLRPKFTEPEILRSSLASVILRMKSLHLTDVETFPFI 447 Query: 181 EPPLGRAIADGYQLLQELGAVDEFNQLTPLGNQLAKLPLDPRVGRMILAGRENACLSELL 240 EPPLGRAIADGYQLLQELGAVD+ N+LT LG +LAKLPLDPRVGRMILA ++N CL+E+L Sbjct: 448 EPPLGRAIADGYQLLQELGAVDDENRLTKLGRELAKLPLDPRVGRMILAAKDNVCLTEVL 507 Query: 241 IIASALSVQDPRDRPMEAQAAADQAHKKFADEKSEFQSYLRIWKWFEEAVEHKKSNRQLQ 300 IIA+ALSVQDPRDRPMEAQ AAD AHKKFADEKSEF SYL+IWKWFE+A+ HKKSNR LQ Sbjct: 508 IIAAALSVQDPRDRPMEAQGAADNAHKKFADEKSEFTSYLKIWKWFEDAIAHKKSNRLLQ 567 Query: 301 DHCRANFLSQLRLREWRDVHSQLLTIVREQGWRMNEAPATYEQLHTALLTGLLGNVGFKS 360 + CRANFLSQLRLREWRDVHSQLLTIVREQGWR+NEAPATYEQLHTALLTGLLGN+GFK+ Sbjct: 568 EECRANFLSQLRLREWRDVHSQLLTIVREQGWRLNEAPATYEQLHTALLTGLLGNIGFKA 627 Query: 361 DEDPHYLGARGIKFHIWPGSSLQKKAGKWIVAAELVDTSRLYARCIAQIQPEWLERIGGH 420 +++PHYLGARGIKFHIWPGSSL KKAGKW++AAELVDT+RLYARCIAQIQPEWLER+ GH Sbjct: 628 EDEPHYLGARGIKFHIWPGSSLIKKAGKWVMAAELVDTTRLYARCIAQIQPEWLERVAGH 687 Query: 421 LLKKSWGEPRWEKRSAQVTASERATLYGLVVYSQRRINFGLINPQEAREIFIRDALVGGD 480 LLKKS+GEPRWEKR+AQV+A ERATLYGLVVYSQRRI +GLINP +AREIFIRDALVGGD Sbjct: 688 LLKKSYGEPRWEKRTAQVSAYERATLYGLVVYSQRRIQYGLINPADAREIFIRDALVGGD 747 Query: 481 FDTRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIAAFYDKLIPADICNGITFEKWHK 540 F+TRAPFFAHN KLVREIENLEHKSRRLDVLVDDELIAAFYDKLIPADI NGI+FEKWHK Sbjct: 748 FETRAPFFAHNHKLVREIENLEHKSRRLDVLVDDELIAAFYDKLIPADIHNGISFEKWHK 807 Query: 541 DATAANADPKLLFLNRDDLMRHEAAGVTTELFPKTMTVAGLSMALSYHFEPGTPRDGVTL 600 DATA +PKLL+LNRDDLMRHEAAGVTTELFPK M VAG+ MALSYHFEPGTPRDGVTL Sbjct: 808 DATA--KEPKLLYLNRDDLMRHEAAGVTTELFPKVMNVAGVDMALSYHFEPGTPRDGVTL 865 Query: 601 TVPLYALNQVSAARCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFCARMEERH 660 VPLYALNQVSA RCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFC R+++ H Sbjct: 866 AVPLYALNQVSADRCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFCDRVQDAH 925 Query: 661 LFGKGDLIDALIADIREQITIMVKSTDFKQETLPAHHAMNFKIVDEHGRQLEMGRNLGSL 720 FGKG L+DA+IAD+REQ I K+TD+K ETL AH MNFK++DEHGRQLEMGRNL SL Sbjct: 926 AFGKGSLLDAVIADVREQTGIATKTTDYKLETLSAHQFMNFKVIDEHGRQLEMGRNLASL 985 Query: 721 QAEFGGQAREQFQKLAEQTAITGIATPAAATLAATSAKPAAGKTAAAPSGASAASVSEYG 780 + EFGGQARE FQ++AE+TA +A A +A +A PA G A + +++A+ + Sbjct: 986 RNEFGGQARESFQRIAEKTA-APMAQAAQVQVAGKAATPATGNKA---TSSTSAATGIHQ 1041 Query: 781 NLTNWTFGELPELLEIQRGAVGPNSGKSQTLIGFPALVDKKTHCDLEVFDDPADAARQHF 840 NLT+WTFGELPELLEIQ+G QTLIGFPALVDK +CDLEVFDDP +AAR H Sbjct: 1042 NLTSWTFGELPELLEIQQG--------KQTLIGFPALVDKGAYCDLEVFDDPNEAARVHR 1093 Query: 841 AGLRRLFALQLKEQLKYQEKNIPGLQQMGMQFMALGSQEELRDQILSAGLERAFMQEPLP 900 GLRRL ALQLKEQLKY EKNIPGLQQMGMQFMALGSQEELR+QI+ AGLERA +QEPLP Sbjct: 1094 IGLRRLLALQLKEQLKYLEKNIPGLQQMGMQFMALGSQEELREQIIHAGLERACLQEPLP 1153 Query: 901 KNADEFNRRKEEGKARFGLLVNEIARLAGLVLAEYYTLPKKLQTIKAHAQASADIQSQLQ 960 K A++FN RK+EGK+R GLLVNEIARL GLVL EY+ LPKKLQT+KAH QA D+Q+QLQ Sbjct: 1154 KTAEQFNARKDEGKSRLGLLVNEIARLVGLVLTEYHALPKKLQTVKAHTQAVNDMQAQLQ 1213 Query: 961 NLVGKRFIADSDYNNLMHFPRYLKAINVRLEKLRADPTRDARLLSEWTQVAAPWQRA 1017 LVGKRFIAD+DY NL HFPRYLKAINVR++KLRADP RD R ++EW Q AAPWQRA Sbjct: 1214 GLVGKRFIADNDYTNLTHFPRYLKAINVRIDKLRADPARDTRAMAEWQQAAAPWQRA 1270 >ref|YP_004752078.1| helicase [Collimonas fungivorans Ter331] gb|AEK61255.1| helicase [Collimonas fungivorans Ter331] Length = 1365 Score = 1727 bits (4473), Expect = 0.0, Method: Compositional matrix adjust. Identities = 837/1033 (81%), Positives = 916/1033 (88%), Gaps = 15/1033 (1%) Query: 1 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER 60 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHP HVEILPLFARLSAQEQER Sbjct: 305 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPAHVEILPLFARLSAQEQER 364 Query: 61 VFKSSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEAVAQSAAN 120 VFK SNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIE +AQSAAN Sbjct: 365 VFKPSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEPIAQSAAN 424 Query: 121 QRAGRCGRVAAGVCIRLYDEQDYLQRPKFTEPEILRSSLASVILRMKSLHLADVETFPFI 180 QRAGRCGRVAAGVCIRLY+EQDYLQRPKFTEPEI+RSSLASVILRMKSLHL DVETFPFI Sbjct: 425 QRAGRCGRVAAGVCIRLYEEQDYLQRPKFTEPEIMRSSLASVILRMKSLHLTDVETFPFI 484 Query: 181 EPPLGRAIADGYQLLQELGAVDEFNQLTPLGNQLAKLPLDPRVGRMILAGRENACLSELL 240 EPP GRAIADGYQLLQELGAVD+ NQLT G QLAKLPLDPRVGRMILA +N CLSE+L Sbjct: 485 EPPPGRAIADGYQLLQELGAVDDNNQLTKTGRQLAKLPLDPRVGRMILAALDNVCLSEML 544 Query: 241 IIASALSVQDPRDRPMEAQAAADQAHKKFADEKSEFQSYLRIWKWFEEAVEHKKSNRQLQ 300 +IA+ALSVQDPRDRP+EAQ AADQAHKKFADEKSEF SYL+IWKWFE+A+EHKK+NRQL Sbjct: 545 VIAAALSVQDPRDRPLEAQGAADQAHKKFADEKSEFLSYLKIWKWFEDAIEHKKTNRQLM 604 Query: 301 DHCRANFLSQLRLREWRDVHSQLLTIVREQGWRMNEAPATYEQLHTALLTGLLGNVGFKS 360 D+CRANFLSQLRLREWRDVHSQLLTIVREQGWR+NEAPATYEQLH ALLTGLLGNVGFK+ Sbjct: 605 DNCRANFLSQLRLREWRDVHSQLLTIVREQGWRLNEAPATYEQLHCALLTGLLGNVGFKA 664 Query: 361 DEDPHYLGARGIKFHIWPGSSLQKKAGKWIVAAELVDTSRLYARCIAQIQPEWLERIGGH 420 DED HYLGAR IKF++WPGS L KKAGKW++AAELVDTSRLYARCI+QIQPEWLE++G H Sbjct: 665 DEDSHYLGARAIKFYLWPGSHLSKKAGKWVMAAELVDTSRLYARCISQIQPEWLEKVGAH 724 Query: 421 LLKKSWGEPRWEKRSAQVTASERATLYGLVVYSQRRINFGLINPQEAREIFIRDALVGGD 480 LLKKS+GEPRWEKR+AQV+ASERATLYGLVVYSQRRINFGLINPQEAREIFIRDALVGG+ Sbjct: 725 LLKKSYGEPRWEKRTAQVSASERATLYGLVVYSQRRINFGLINPQEAREIFIRDALVGGE 784 Query: 481 FDTRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIAAFYDKLIPADICNGITFEKWHK 540 F+TRAPFFAHNQKL+REIENLEHKSRRLDVLVDDELIAAFYDKLIPADICNGI FEKWHK Sbjct: 785 FETRAPFFAHNQKLIREIENLEHKSRRLDVLVDDELIAAFYDKLIPADICNGIAFEKWHK 844 Query: 541 DATAANADPKLLFLNRDDLMRHEAAGVTTELFPKTMTVAGLSMALSYHFEPGTPRDGVTL 600 D + PKLLFLNRDDLMRHEAAG+TTELFPK M VAG+ MALSYHFEPGTPRDGVTL Sbjct: 845 DMSVQT--PKLLFLNRDDLMRHEAAGITTELFPKVMRVAGIEMALSYHFEPGTPRDGVTL 902 Query: 601 TVPLYALNQVSAARCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFCARMEERH 660 TVPLYALNQV RCEWLV GMLKEKVHLLLKSLPQK+RR+CVPLPDYAAGFC R++ RH Sbjct: 903 TVPLYALNQVYVDRCEWLVAGMLKEKVHLLLKSLPQKIRRNCVPLPDYAAGFCERIQARH 962 Query: 661 LFGKGDLIDALIADIREQITIMVKSTDFKQETLPAHHAMNFKIVDEHGRQLEMGRNLGSL 720 +FG G+L+DAL+ADIR + T+ +STDFK ETLPAHH+MNFK+VDEHGRQL+MGRNL +L Sbjct: 963 VFGHGNLLDALMADIRTETTVAARSTDFKLETLPAHHSMNFKVVDEHGRQLDMGRNLAAL 1022 Query: 721 QAEFGGQAREQFQKLAEQTAITGIATPAAATLAAT--SAKPAAGKTAAAP-SGASAASVS 777 QAEFGGQARE FQ+LA T + PA AT +A PAA + A P + A+ + + Sbjct: 1023 QAEFGGQARESFQRLASVTVADEASVPANDVAQATGKTAAPAATRVTAQPAAKAADGANA 1082 Query: 778 EYGNLTNWTFGELPELLEIQRGAVGPNSGKSQTLIGFPALVDKKTHCDLEVFDDPADAAR 837 ++ NLT WTFGELPELLEIQ+G QTLIGFPALVD+ THCDLEVFDDP +A R Sbjct: 1083 QFSNLTAWTFGELPELLEIQQG--------KQTLIGFPALVDRGTHCDLEVFDDPNEAVR 1134 Query: 838 QHFAGLRRLFALQLKEQLKYQEKNIPGLQQMGMQFMALGSQEELRDQILSAGLERAFMQE 897 H GLRRLFALQLKEQLK+ EKNIPGLQQMGMQF+ALGSQEELRDQI+ AGLERA +Q Sbjct: 1135 IHHLGLRRLFALQLKEQLKFLEKNIPGLQQMGMQFLALGSQEELRDQIIHAGLERACLQL 1194 Query: 898 PLPKNADEFNRRKEEGKARFGLLVNEIARLAGLVLAEYYTLPKKLQTIKAHAQASADIQS 957 PLP+ A EF +RKEEGK+R GLL NEIARLA L+LAEY+ LPK+LQ K H QA ADIQ+ Sbjct: 1195 PLPRTAAEFAQRKEEGKSRLGLLCNEIARLAALILAEYHGLPKRLQGAKGHPQAVADIQA 1254 Query: 958 QLQNLVGKRFIADSDYNNLMHFPRYLKAINVRLEKLRADPTRDARLLSEWTQVAAPWQRA 1017 Q+Q+LV KRFIAD+DY NL HFPRYLKA+NVRLEKLRADP RD RL++EW QVA PWQRA Sbjct: 1255 QMQSLVSKRFIADNDYANLTHFPRYLKAVNVRLEKLRADPARDTRLMTEWAQVATPWQRA 1314 Query: 1018 QX--RGRRRPQDA 1028 Q G+ P+ A Sbjct: 1315 QKDRSGKSDPKQA 1327 >ref|YP_003776846.1| ATP-dependent RNA helicase [Herbaspirillum seropedicae SmR1] gb|ADJ64938.1| ATP-dependent RNA helicase protein [Herbaspirillum seropedicae SmR1] Length = 1355 Score = 1722 bits (4461), Expect = 0.0, Method: Compositional matrix adjust. Identities = 860/1021 (84%), Positives = 938/1021 (91%), Gaps = 12/1021 (1%) Query: 1 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER 60 MDAVVDAVDELARIG+GDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER Sbjct: 292 MDAVVDAVDELARIGAGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER 351 Query: 61 VFKSSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEAVAQSAAN 120 VFK+SNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIE VAQSAAN Sbjct: 352 VFKTSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEPVAQSAAN 411 Query: 121 QRAGRCGRVAAGVCIRLYDEQDYLQRPKFTEPEILRSSLASVILRMKSLHLADVETFPFI 180 QRAGRCGRVAAGVCIRLYDEQD+LQRPKFT+PEILRSSLASVILRMKSLHL DVE+FPFI Sbjct: 412 QRAGRCGRVAAGVCIRLYDEQDFLQRPKFTDPEILRSSLASVILRMKSLHLTDVESFPFI 471 Query: 181 EPPLGRAIADGYQLLQELGAVDE---FNQLTPLGNQLAKLPLDPRVGRMILAGRENACLS 237 EPPLGRAIADGYQLLQELGAV+E N+LTPLG QLA+LPLDPRVGRMILAGR+NACL+ Sbjct: 472 EPPLGRAIADGYQLLQELGAVEEQGGVNRLTPLGKQLARLPLDPRVGRMILAGRDNACLT 531 Query: 238 ELLIIASALSVQDPRDRPMEAQAAADQAHKKFADEKSEFQSYLRIWKWFEEAVEHKKSNR 297 ELLIIA+A+SVQDPRDRPM+AQ AAD AHKKFADEKSEF SYL+IWKWFE+A+ HKKSNR Sbjct: 532 ELLIIAAAVSVQDPRDRPMDAQNAADNAHKKFADEKSEFASYLKIWKWFEDAIAHKKSNR 591 Query: 298 QLQDHCRANFLSQLRLREWRDVHSQLLTIVREQGWRMNEAPATYEQLHTALLTGLLGNVG 357 QLQ+HCR NFLSQLRLREWRDVHSQLLTIV+EQGWR+NEAPATY+QLH ALLTGLLGNVG Sbjct: 592 QLQEHCRENFLSQLRLREWRDVHSQLLTIVKEQGWRLNEAPATYDQLHLALLTGLLGNVG 651 Query: 358 FKSDEDPHYLGARGIKFHIWPGSSLQKKAGKWIVAAELVDTSRLYARCIAQIQPEWLERI 417 FKS++D YLGARGIKF+IWPG+ L KK G+W++AAELVDT+RLYARC+A IQPEWLE++ Sbjct: 652 FKSEDDAQYLGARGIKFNIWPGAHLTKKPGRWVMAAELVDTARLYARCVANIQPEWLEKL 711 Query: 418 GGHLLKKSWGEPRWEKRSAQVTASERATLYGLVVYSQRRINFGLINPQEAREIFIRDALV 477 GGHLLKKSWGEPRWEKR+AQVTASERATLYGLVVYSQRRIN+G INP EAREIFIRDALV Sbjct: 712 GGHLLKKSWGEPRWEKRAAQVTASERATLYGLVVYSQRRINYGKINPAEAREIFIRDALV 771 Query: 478 GGDFDTRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIAAFYDKLIPADICNGITFEK 537 GGDF+TRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELI FYDKLIP DICNG+ FEK Sbjct: 772 GGDFETRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIIGFYDKLIPHDICNGVDFEK 831 Query: 538 WHKDATAANADPKLLFLNRDDLMRHEAAGVTTELFPKTMTVAGLSMALSYHFEPGTPRDG 597 WHK+ATA ADPKLL+LNRDDLMRHEAAGVTTELFPKTM VAG++MALSYHFEPG RDG Sbjct: 832 WHKEATA--ADPKLLYLNRDDLMRHEAAGVTTELFPKTMNVAGIAMALSYHFEPGAARDG 889 Query: 598 VTLTVPLYALNQVSAARCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFCARME 657 VTLTVPLYALNQVSA RCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAA FC RME Sbjct: 890 VTLTVPLYALNQVSADRCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAARFCERME 949 Query: 658 ERHLFGKGDLIDALIADIREQITIMVKSTDFKQETLPAHHAMNFKIVDEHGRQLEMGRNL 717 ER FG+G+LIDA+IADIREQIT++VK +DFKQETL AHHAMNFKIVDEHGRQLEMGRNL Sbjct: 950 ERKAFGRGNLIDAIIADIREQITLLVKPSDFKQETLSAHHAMNFKIVDEHGRQLEMGRNL 1009 Query: 718 GSLQAEFGGQAREQFQKLAEQTAITGIATPAAATLAATSAKPAAGKTAAAPSGASAASVS 777 +LQAEFGGQAR+QFQKLAEQ AI A + +A G T+AAP+ A+ ASV Sbjct: 1010 AALQAEFGGQARQQFQKLAEQVAIAPREDEDNAAPSPAAATSKGG-TSAAPAAAAPASVG 1068 Query: 778 EYGNLTNWTFGELPELLEIQRGAVGPNSGK-SQTLIGFPALVDKKTHCDLEVFDDPADAA 836 EY NLT+W+FGELPELLEI RG SGK +QTLIGFPALVD+KTHCDLEVFDDPA+AA Sbjct: 1069 EYSNLTSWSFGELPELLEITRG-----SGKQAQTLIGFPALVDRKTHCDLEVFDDPAEAA 1123 Query: 837 RQHFAGLRRLFALQLKEQLKYQEKNIPGLQQMGMQFMALGSQEELRDQILSAGLERAFMQ 896 R H+AGLRRLFALQ+KEQLKY EKNIPGLQQMGMQFMALGSQEELR+QIL+AGLERAF+Q Sbjct: 1124 RFHYAGLRRLFALQMKEQLKYLEKNIPGLQQMGMQFMALGSQEELREQILNAGLERAFLQ 1183 Query: 897 EPLPKNADEFNRRKEEGKARFGLLVNEIARLAGLVLAEYYTLPKKLQTIKAHAQASADIQ 956 +PLP+NADEFNRR++EGKAR GLLVNEIARL G +LAEY+ LPKKLQ IKAHAQA+AD+Q Sbjct: 1184 DPLPRNADEFNRRRDEGKARLGLLVNEIARLCGQILAEYHALPKKLQGIKAHAQAAADMQ 1243 Query: 957 SQLQNLVGKRFIADSDYNNLMHFPRYLKAINVRLEKLRADPTRDARLLSEWTQVAAPWQR 1016 +QL LVGKRF+A++DY NL H+PRYLKAINVRL+KLRADP RD RLL+EW VA P+QR Sbjct: 1244 AQLSQLVGKRFVAETDYGNLSHYPRYLKAINVRLDKLRADPARDTRLLAEWNSVALPYQR 1303 Query: 1017 A 1017 A Sbjct: 1304 A 1304 >ref|ZP_08275512.1| macromolecule metabolism; macromolecule synthesis [Oxalobacteraceae bacterium IMCC9480] gb|EGF31012.1| macromolecule metabolism; macromolecule synthesis [Oxalobacteraceae bacterium IMCC9480] Length = 1279 Score = 1647 bits (4264), Expect = 0.0, Method: Compositional matrix adjust. Identities = 809/1017 (79%), Positives = 882/1017 (86%), Gaps = 21/1017 (2%) Query: 1 MDAVVDAVDELARIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER 60 M+A+ +AVDEL RIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER Sbjct: 231 MEALTEAVDELCRIGSGDVLVFLPGEREIRDAAEALRKHHPPHVEILPLFARLSAQEQER 290 Query: 61 VFKSSNARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEAVAQSAAN 120 VFK S ARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEAVAQSAAN Sbjct: 291 VFKPSGARRIVLATNVAETSLTVPGIRYVVDAGLARVKRYSYRNKVEQLQIEAVAQSAAN 350 Query: 121 QRAGRCGRVAAGVCIRLYDEQDYLQRPKFTEPEILRSSLASVILRMKSLHLADVETFPFI 180 QRAGRCGRVAAGVCIRLY+E+DYL RP FTEPEILRSSLASVILRMKSLHL DVETFPFI Sbjct: 351 QRAGRCGRVAAGVCIRLYEEKDYLMRPAFTEPEILRSSLASVILRMKSLHLTDVETFPFI 410 Query: 181 EPPLGRAIADGYQLLQELGAVDEFNQLTPLGNQLAKLPLDPRVGRMILAGRENACLSELL 240 EPP GRAIADGYQLLQELGAVD+ N LTP G QL KLPLDPRVGRMILA +N CL E+L Sbjct: 411 EPPPGRAIADGYQLLQELGAVDDNNDLTPTGRQLGKLPLDPRVGRMILAALDNVCLREVL 470 Query: 241 IIASALSVQDPRDRPMEAQAAADQAHKKFADEKSEFQSYLRIWKWFEEAVEHKKSNRQLQ 300 IIASALSVQDPRDRP+E QAAAD AHKKFADEKSEF SYL+IW WFEEA+EHKK+NRQLQ Sbjct: 471 IIASALSVQDPRDRPLEVQAAADLAHKKFADEKSEFSSYLKIWTWFEEAIEHKKTNRQLQ 530 Query: 301 DHCRANFLSQLRLREWRDVHSQLLTIVREQGWRMNEAPATYEQLHTALLTGLLGNVGFKS 360 D CRANFLSQ+RLREWRDVHSQLLTIV+EQGWRMNE PATYE LH+ALLTGLLGNVGFKS Sbjct: 531 DSCRANFLSQMRLREWRDVHSQLLTIVKEQGWRMNETPATYENLHSALLTGLLGNVGFKS 590 Query: 361 DEDPHYLGARGIKFHIWPGSSLQKKAGKWIVAAELVDTSRLYARCIAQIQPEWLERIGGH 420 DED HYLGAR IKFHIWPGSSL KKAGKWI+AAELVDT+RLYARC+AQIQPEWLER+G H Sbjct: 591 DEDTHYLGARAIKFHIWPGSSLLKKAGKWIMAAELVDTTRLYARCVAQIQPEWLERVGAH 650 Query: 421 LLKKSWGEPRWEKRSAQVTASERATLYGLVVYSQRRINFGLINPQEAREIFIRDALVGGD 480 LLKKS+GEP WEKR+AQVTASERATLYGLVVYSQRRINFGLINP EAREIFIRDALVGG+ Sbjct: 651 LLKKSYGEPHWEKRTAQVTASERATLYGLVVYSQRRINFGLINPVEAREIFIRDALVGGE 710 Query: 481 FDTRAPFFAHNQKLVREIENLEHKSRRLDVLVDDELIAAFYDKLIPADICNGITFEKWHK 540 FDTRAPFFA N L+REIENLEHKSRRLDVLVDDELIAAFYDK++PADICNGI+FEKWHK Sbjct: 711 FDTRAPFFAFNNNLIREIENLEHKSRRLDVLVDDELIAAFYDKMLPADICNGISFEKWHK 770 Query: 541 DATAANADPKLLFLNRDDLMRHEAAGVTTELFPKTMTVAGLSMALSYHFEPGTPRDGVTL 600 DAT A+PKLL+LNRDDLMRHEAAG+TTELFPK + G+ M L+YHFEPGTPRDGVTL Sbjct: 771 DAT--RAEPKLLYLNRDDLMRHEAAGITTELFPKLLPGIGIEMPLAYHFEPGTPRDGVTL 828 Query: 601 TVPLYALNQVSAARCEWLVPGMLKEKVHLLLKSLPQKLRRHCVPLPDYAAGFCARMEERH 660 TVPL+ALNQ+SAARC+WLVPGMLKEKVHLLLKS+PQKLRR+CVPLP YAA F R+ E+ Sbjct: 829 TVPLFALNQLSAARCDWLVPGMLKEKVHLLLKSMPQKLRRNCVPLPHYAAAFLDRVNEQK 888 Query: 661 LFGKGDLIDALIADIREQITIMVKSTDFKQETLPAHHAMNFKIVDEHGRQLEMGRNLGSL 720 FG+G LI+A+IAD+R I +DFK ETLPAHH MNFK+VDEHGRQLEMGRNLG+L Sbjct: 889 TFGRGSLIEAIIADVRVHAHITPLLSDFKAETLPAHHFMNFKVVDEHGRQLEMGRNLGAL 948 Query: 721 QAEFGGQAREQFQKLAEQTAITGIATPAAATLAATSAKPAAGKTAAAPSGASAASVSEYG 780 QAEFGGQARE FQK+AE TAIT + A SA+P ASAA+ +++ Sbjct: 949 QAEFGGQARESFQKIAESTAITNVPV-AQIRPVGKSAQPV----------ASAAAPTQHQ 997 Query: 781 NLTNWTFGELPELLEIQRGAVGPNSGKSQTLIGFPALVDKKTHCDLEVFDDPADAARQHF 840 LT WTFGELPELLEIQ+G + TLIGFPALVDK HCDLEVFDDP +AAR H Sbjct: 998 KLTAWTFGELPELLEIQQGKL--------TLIGFPALVDKGAHCDLEVFDDPTEAARIHR 1049 Query: 841 AGLRRLFALQLKEQLKYQEKNIPGLQQMGMQFMALGSQEELRDQILSAGLERAFMQEPLP 900 GLRRL ALQL+EQLK+ EKNIPGLQQMGMQFMALGSQEELRDQI+ AGLERA +QEPLP Sbjct: 1050 GGLRRLLALQLREQLKFLEKNIPGLQQMGMQFMALGSQEELRDQIIEAGLERACLQEPLP 1109 Query: 901 KNADEFNRRKEEGKARFGLLVNEIARLAGLVLAEYYTLPKKLQTIKAHAQASADIQSQLQ 960 + A EF+ RKE GK+R GLLVNEIARL GL+L EYY LPKKLQ K HA ADIQ+QLQ Sbjct: 1110 RTAIEFDARKEAGKSRLGLLVNEIARLVGLILTEYYALPKKLQGAKGHAATVADIQAQLQ 1169 Query: 961 NLVGKRFIADSDYNNLMHFPRYLKAINVRLEKLRADPTRDARLLSEWTQVAAPWQRA 1017 LVGKRF+ ++ Y +L FPRYLKA+NVRLEKLR DP+RD R ++EW Q A WQR Sbjct: 1170 GLVGKRFVTETSYTSLTQFPRYLKAVNVRLEKLRIDPSRDVRWMTEWQQAALLWQRG 1226