BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0026.p (401 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776834.1| outer membrane efflux protein [Herbaspirillu... 582 e-164 ref|YP_004752089.1| outer membrane efflux protein [Collimonas fu... 564 e-158 ref|YP_001355168.1| outer membrane efflux protein [Janthinobacte... 321 1e-85 ref|ZP_08869895.1| RND efflux system, outer membrane lipoprotein... 318 1e-84 ref|ZP_07027035.1| RND efflux system, outer membrane lipoprotein... 317 2e-84 >ref|YP_003776834.1| outer membrane efflux protein [Herbaspirillum seropedicae SmR1] gb|ADJ64926.1| outer membrane efflux protein [Herbaspirillum seropedicae SmR1] Length = 492 Score = 582 bits (1499), Expect = e-164, Method: Compositional matrix adjust. Identities = 312/389 (80%), Positives = 346/389 (88%) Query: 2 SRVRQAEANARIAGAPLLPDADFAGSANRALPLSGGTPTTTASGMLEINYEVDFWGKNRA 61 SRV+QAEA ARIAGAPLLP A A R +P+SGGTPT TA+ L+++YE+DFWGKNRA Sbjct: 102 SRVKQAEAQARIAGAPLLPSAGINAGAAREIPISGGTPTNTANASLQVSYEIDFWGKNRA 161 Query: 62 GLAAAEASLRANMYDRETVALTVTSGIVSTFLQVLSLRDRLEIARQNVGNAQRVLKLVEA 121 G+ AAEA+LRAN YDRETVALTVTSGIVST+LQVLSLRDRL IARQNV NA+RVL+LVEA Sbjct: 162 GVEAAEATLRANRYDRETVALTVTSGIVSTYLQVLSLRDRLAIARQNVQNAERVLRLVEA 221 Query: 122 QSRAGAASPLDLARQRSALANQQAALPDLMQQERDAQTALAILLGRPPQNFSVGEKGLAT 181 QSRAG+ASPLDLARQRSALANQ+ +PDL QQE+DAQTALAILLGRPPQNF V EKGLA Sbjct: 222 QSRAGSASPLDLARQRSALANQRQLIPDLQQQEQDAQTALAILLGRPPQNFKVEEKGLAR 281 Query: 182 IQMPKIAPGLPSELLTRRPDIRRAEARLAEANANVAVARAALFPSIRLTGSTGAQSNALL 241 IQMP+I+ GLPSELLTRRPDIRRAEA LA ANANVAVARAALFPSI LTGSTGAQS+ALL Sbjct: 282 IQMPRISAGLPSELLTRRPDIRRAEASLAAANANVAVARAALFPSITLTGSTGAQSSALL 341 Query: 242 SLFDGPNLLANLGASLTAPIFDAGRLNSRRDLAVAQKQELVQVYRSAVVSALSEVEKSLG 301 SLFDGPNL ANLGA L APIFD G+L +RDLA+AQK+ELVQVYR V+++LSEVEK+LG Sbjct: 342 SLFDGPNLFANLGAGLIAPIFDGGKLRGQRDLAIAQKEELVQVYRQRVITSLSEVEKALG 401 Query: 302 AIRTLEERYRLKNQEVDQARFAFELSEIRYRSGAEDLMVVLDTQRILSEAQNQLGQIKLQ 361 AIR+LEERYRLK EVDQARFAFEL+EIRYR+GAEDL+VVLDTQR LSEAQNQLGQIKLQ Sbjct: 402 AIRSLEERYRLKVGEVDQARFAFELAEIRYRAGAEDLLVVLDTQRTLSEAQNQLGQIKLQ 461 Query: 362 RLQATVSLYKALGGGWRDDVRYGNPGTDS 390 RLQATVSLYKALGGGW+D G+ GT S Sbjct: 462 RLQATVSLYKALGGGWQDSQAPGDSGTSS 490 >ref|YP_004752089.1| outer membrane efflux protein [Collimonas fungivorans Ter331] gb|AEK61266.1| outer membrane efflux protein [Collimonas fungivorans Ter331] Length = 480 Score = 564 bits (1453), Expect = e-158, Method: Compositional matrix adjust. Identities = 299/387 (77%), Positives = 344/387 (88%), Gaps = 3/387 (0%) Query: 1 MSRVRQAEANARIAGAPLLPDADFAGSANRALPL-SGGTPTTTASGMLEINYEVDFWGKN 59 +SRVRQAEA ARIAGAPLLP+ADF+ + NRA+PL S G+ T+ SG++EI YEVDFWGKN Sbjct: 86 ISRVRQAEAQARIAGAPLLPNADFSTNVNRAVPLASSGSAVTSTSGLVEIGYEVDFWGKN 145 Query: 60 RAGLAAAEASLRANMYDRETVALTVTSGIVSTFLQVLSLRDRLEIARQNVGNAQRVLKLV 119 RAGLAAAEASL+AN YDRETVALTVTSGIVST+LQVLSLRDR+EIA+QNV NA+RVLKLV Sbjct: 146 RAGLAAAEASLQANRYDRETVALTVTSGIVSTYLQVLSLRDRIEIAQQNVDNAERVLKLV 205 Query: 120 EAQSRAGAASPLDLARQRSALANQQAALPDLMQQERDAQTALAILLGRPPQNFSVGEKGL 179 AQSRAG+ASPLDLARQRSA+A Q+A +PDL QQER+AQTALAILLGRPPQ F+V E GL Sbjct: 206 AAQSRAGSASPLDLARQRSAVAGQKAVIPDLKQQEREAQTALAILLGRPPQTFTVNEAGL 265 Query: 180 ATIQMPKIAPGLPSELLTRRPDIRRAEARLAEANANVAVARAALFPSIRLTGSTGAQSNA 239 A I +P++ PGLPSELL+RRPDIR AEA LA ANANVA ARAALFPSIRLTGS G QSNA Sbjct: 266 AKILLPQVTPGLPSELLSRRPDIRHAEAELAAANANVANARAALFPSIRLTGSAGGQSNA 325 Query: 240 LLSLFDGPNLLANLGASLTAPIFDAGRLNSRRDLAVAQKQELVQVYRSAVVSALSEVEKS 299 LLSLF+GPN+LAN GA L APIFDAGRLNS+RDLA+AQKQELVQ+YRS V++ALSEV+ + Sbjct: 326 LLSLFNGPNMLANFGAGLVAPIFDAGRLNSQRDLAIAQKQELVQIYRSTVIAALSEVDTA 385 Query: 300 LGAIRTLEERYRLKNQEVDQARFAFELSEIRYRSGAEDLMVVLDTQRILSEAQNQLGQIK 359 LG IR+L+E+ +LK E++QARFAFELSEIRYR GAEDLM VLDTQR LSE QN+LGQIK Sbjct: 386 LGQIRSLDEQRKLKVTEMEQARFAFELSEIRYRVGAEDLMTVLDTQRSLSEVQNELGQIK 445 Query: 360 LQRLQATVSLYKALGGGWRDDVRYGNP 386 L+RL+ATVSLYKALGGGW+D +G+P Sbjct: 446 LKRLKATVSLYKALGGGWQD--VHGSP 470 >ref|YP_001355168.1| outer membrane efflux protein [Janthinobacterium sp. Marseille] gb|ABR89418.1| outer membrane efflux protein [Janthinobacterium sp. Marseille] Length = 473 Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 185/385 (48%), Positives = 258/385 (67%), Gaps = 12/385 (3%) Query: 1 MSRVRQAEANARIAGAPLLPD--ADFAGSANRALPLSGGTPTTTASGM-----LEINYEV 53 ++RV QA+A A IAGA LLP+ +F + N L GG TA+G L YE+ Sbjct: 80 VARVTQAQATATIAGAALLPELNGNFGATRNGRL---GGDGNGTATGTVYQAGLSATYEL 136 Query: 54 DFWGKNRAGLAAAEASLRANMYDRETVALTVTSGIVSTFLQVLSLRDRLEIARQNVGNAQ 113 DFWG+NRA +A A LRA +DR+TV LTVT+G+ S++LQ + LR+R+ IA +V +AQ Sbjct: 137 DFWGRNRAVRDSARAGLRAAEFDRDTVHLTVTAGVASSWLQTVGLRERVAIADLSVASAQ 196 Query: 114 RVLKLVEAQSRAGAASPLDLARQRSALANQQAALPDLMQQERDAQTALAILLGRPPQNFS 173 R+L ++E+++RAGAA+PL+LA+QR LA Q A + QQ D+ T LA+LLGR P Sbjct: 197 RLLDVIESRARAGAANPLELAQQRGVLAAQMRARAAIRQQAEDSLTTLAVLLGRNPSLLV 256 Query: 174 VGEKGLATIQMPKIAPGLPSELLTRRPDIRRAEARLAEANANVAVARAALFPSIRLTGST 233 + L +Q P + GLP++LL RRPDI RAEA+L+ A+AN+ ARAA+ P I L G Sbjct: 257 LAGTELNKLQAPAVVAGLPADLLVRRPDIARAEAQLSGADANIIAARAAMLPRISLGGDI 316 Query: 234 GAQSNALLSLFDGPNLLANLGASLTAPIFDAGRLNSRRDLAVAQKQELVQVYRSAVVSAL 293 A SN + S+FD P + +L A L APIF+AGRL + RDLA+AQ++EL+ YR A+V+A Sbjct: 317 TAGSNRVSSVFDNP--VYSLAAGLAAPIFNAGRLAAGRDLALAQREELLANYRRAIVAAF 374 Query: 294 SEVEKSLGAIRTLEERYRLKNQEVDQARFAFELSEIRYRSGAEDLMVVLDTQRILSEAQN 353 +VE +L A+ ++ + + +E+ QA+ AF L+E RYR+GAE + +LD QR L AQ+ Sbjct: 375 GDVEVALNAVAGIDAQRIAQEEELRQAQRAFNLAESRYRAGAETSLTLLDAQRTLYAAQD 434 Query: 354 QLGQIKLQRLQATVSLYKALGGGWR 378 Q++ RLQA VSLYKALGGGW+ Sbjct: 435 AAAQLRTLRLQAAVSLYKALGGGWQ 459 >ref|ZP_08869895.1| RND efflux system, outer membrane lipoprotein [Azospirillum amazonense Y2] gb|EGY00513.1| RND efflux system, outer membrane lipoprotein [Azospirillum amazonense Y2] Length = 483 Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 180/383 (46%), Positives = 250/383 (65%), Gaps = 15/383 (3%) Query: 13 IAGAPLLPDADFAGSANR----------ALPLSGGTPTTTASG-----MLEINYEVDFWG 57 I+GA L P S+ R A L+G P +G L +YE+DFWG Sbjct: 89 ISGASLWPSVQLGLSSTRSGSRNIKGSAAAGLNGAVPLNDYAGNVHQASLSASYEIDFWG 148 Query: 58 KNRAGLAAAEASLRANMYDRETVALTVTSGIVSTFLQVLSLRDRLEIARQNVGNAQRVLK 117 KNRA +A+ SL A+ +D ETVAL+++S + +T+ Q+L++RDRL +AR N+ NA+ VL Sbjct: 149 KNRATRDSAQFSLDASRFDSETVALSLSSNVAATYFQILAIRDRLAVARGNLENAEHVLS 208 Query: 118 LVEAQSRAGAASPLDLARQRSALANQQAALPDLMQQERDAQTALAILLGRPPQNFSVGEK 177 L++A+ +AGA S LDL +QRS +A Q+AA+P L QQER ALAILLGR P+ F+V K Sbjct: 209 LIDARVQAGADSQLDLVQQRSIVATQRAAVPALEQQERTQLNALAILLGRAPEGFTVQAK 268 Query: 178 GLATIQMPKIAPGLPSELLTRRPDIRRAEARLAEANANVAVARAALFPSIRLTGSTGAQS 237 GLA +Q P + G+P+ELLTRRPDIR AEA+LA A A++ VAR + PS+ L STG ++ Sbjct: 269 GLADVQPPALGTGVPAELLTRRPDIRFAEAQLAAAGADIKVARTQMLPSVTLNASTGVEA 328 Query: 238 NALLSLFDGPNLLANLGASLTAPIFDAGRLNSRRDLAVAQKQELVQVYRSAVVSALSEVE 297 L L + P LL +LG + +F GRL + A + +EL + YR A +SALS+VE Sbjct: 329 ATLAHLVNAPTLLFSLGGEIAQSLFSGGRLEGQVHQAEGRHRELAEDYRKAALSALSDVE 388 Query: 298 KSLGAIRTLEERYRLKNQEVDQARFAFELSEIRYRSGAEDLMVVLDTQRILSEAQNQLGQ 357 ++ +I +++Y L+ V Q++ AFEL+E RYR G DL +LDTQR L Q+ L Q Sbjct: 389 SAVYSIDRYQDQYGLQKDAVAQSQRAFELAEDRYRGGLTDLQTLLDTQRTLLSTQDTLAQ 448 Query: 358 IKLQRLQATVSLYKALGGGWRDD 380 +KL R+QA+VSL+KALGGGW+DD Sbjct: 449 VKLSRVQASVSLFKALGGGWQDD 471 >ref|ZP_07027035.1| RND efflux system, outer membrane lipoprotein, NodT family [Afipia sp. 1NLS2] gb|EFI51878.1| RND efflux system, outer membrane lipoprotein, NodT family [Afipia sp. 1NLS2] Length = 498 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 183/385 (47%), Positives = 242/385 (62%), Gaps = 9/385 (2%) Query: 2 SRVRQAEANARIAGAPLLPDADFAGSANRALPLSG----GT-----PTTTASGMLEINYE 52 +R+ QA+A AR AGA LLP D SA R+ SG GT T S L +YE Sbjct: 99 ARILQADALARTAGAALLPTLDANASATRSKSSSGFLNNGTAAARGTINTYSTSLSASYE 158 Query: 53 VDFWGKNRAGLAAAEASLRANMYDRETVALTVTSGIVSTFLQVLSLRDRLEIARQNVGNA 112 VD W KNR L AAE + AN +DR+TVALT + + + QVL+ +DR+ A++N+ +A Sbjct: 159 VDLWAKNRDALLAAEKTADANRFDRDTVALTSMVSVANAYFQVLAAQDRIATAQRNIASA 218 Query: 113 QRVLKLVEAQSRAGAASPLDLARQRSALANQQAALPDLMQQERDAQTALAILLGRPPQNF 172 QR+ ++ + AG S LDLA+Q S LANQ+AA+P L Q LA L+ RPP+ Sbjct: 219 QRIYDAIKTRVDAGTGSDLDLAQQESLLANQRAAVPPLRQTLTQNINILATLVARPPERV 278 Query: 173 SVGEKGLATIQMPKIAPGLPSELLTRRPDIRRAEARLAEANANVAVARAALFPSIRLTGS 232 + LA I P++ PGLPSELL +RPDIRR EA+LA A ANV ARA FPSI+LTG Sbjct: 279 HIKGGSLARISAPRVTPGLPSELLIQRPDIRRQEAQLASATANVGSARAQFFPSIQLTGQ 338 Query: 233 TGAQSNALLSLFDGPNLLANLGASLTAPIFDAGRLNSRRDLAVAQKQELVQVYRSAVVSA 292 G QS+AL +LF + +L A LT PIFDAGR+ + DL AQ+ EL+Q YR V+SA Sbjct: 339 GGYQSSALSALFMPQSAFFSLAAGLTQPIFDAGRIQANFDLTKAQQDELLQTYRKTVISA 398 Query: 293 LSEVEKSLGAIRTLEERYRLKNQEVDQARFAFELSEIRYRSGAEDLMVVLDTQRILSEAQ 352 S+V+ +L AI+ R RL+ V +R AFELSE + ++G D++ VL+TQ+ L A+ Sbjct: 399 FSDVDTALDAIKQTTNRLRLQRIVVKSSRRAFELSEKQLQAGTADIVTVLNTQQTLFTAE 458 Query: 353 NQLGQIKLQRLQATVSLYKALGGGW 377 + L Q +L LQA VSL+ ALGGGW Sbjct: 459 DTLQQAQLAWLQAYVSLFSALGGGW 483