BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0021.p (468 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_556956.1| putative gluconate dehydrogenase [Burkholderia ... 608 e-172 ref|YP_001889908.1| gluconate 2-dehydrogenase [Burkholderia phyt... 600 e-169 ref|ZP_07950277.1| gluconate 2-dehydrogenase subunit protein [En... 546 e-153 ref|YP_001478246.1| gluconate 2-dehydrogenase [Serratia proteama... 541 e-152 ref|YP_003979723.1| gluconate 2-dehydrogenase flavoprotein [Achr... 523 e-146 >ref|YP_556956.1| putative gluconate dehydrogenase [Burkholderia xenovorans LB400] gb|ABE28904.1| Putative gluconate dehydrogenase [Burkholderia xenovorans LB400] Length = 594 Score = 608 bits (1567), Expect = e-172, Method: Compositional matrix adjust. Identities = 279/370 (75%), Positives = 325/370 (87%) Query: 1 MADITKPKVDVVLVGMGWSGSIMGMEMTEAGLSVVGLERGETRDTNPDFAYPKIADELTY 60 MA+I++PKVD V+VGMGWSGSIM +E+ +AGL+VVGLERGE RDT PDFAYPKIADELTY Sbjct: 1 MANISQPKVDAVVVGMGWSGSIMAIELADAGLTVVGLERGENRDTYPDFAYPKIADELTY 60 Query: 61 AQRYKLMQNLSKETVTVRHSPNDDALPYRQLGSFLLGNGLGGAGVHWNGVTWRAYDAELQ 120 QRYKLMQ+L+ ETVT+R N+ ALP RQ G+FL G+G+GG+GVHWNG T+RA DA+L+ Sbjct: 61 VQRYKLMQSLAHETVTIRRQANEVALPLRQYGAFLFGDGVGGSGVHWNGFTYRATDADLK 120 Query: 121 MRSHYEQRYGKRFIPVDMTIQDWPMTYAELEPFYDRFEYVAGVSGKAGNLDGKIIEGGNV 180 +RSHYEQRYGK+FIP DMTIQDWP++ AELEPFYDRFEYVAG SG+AGNL+G+ I GGN Sbjct: 121 LRSHYEQRYGKQFIPDDMTIQDWPVSAAELEPFYDRFEYVAGTSGRAGNLNGRPISGGNP 180 Query: 181 FEAPRKREYPLPPLKNNAPATLFETAAREVGYHPFPIPAANASQAYQNPYGMQLGPCNYC 240 FEAPR R+Y LPPL P+ LFE AAREVGYHP+P PA+ AS+AY+NPYGMQLGPCN+C Sbjct: 181 FEAPRSRDYALPPLPTAYPSMLFEQAAREVGYHPYPTPASIASKAYKNPYGMQLGPCNFC 240 Query: 241 GYCERFGCYMYAKASPQTCILPALLKKPNFELRDKSYVTRINLAGDGKRATGVTYIDAQG 300 GYCE FGCYM++KASPQTCILPAL +KPNFELR++S V ++NL GKRATGVTYIDAQG Sbjct: 241 GYCELFGCYMFSKASPQTCILPALARKPNFELRERSAVIKVNLDPTGKRATGVTYIDAQG 300 Query: 301 RSVEQPADLVILCAYQMHNVRLLLLSGIGKPYDPKTGDGVVGKNYAYQKNSSVSLFFDKD 360 R+VEQPAD+V LCAYQMHNVRLLLLSGIGKPYDP TG+G VGKNYAYQKNS + +FFDKD Sbjct: 301 RTVEQPADIVALCAYQMHNVRLLLLSGIGKPYDPATGEGTVGKNYAYQKNSKIPVFFDKD 360 Query: 361 VAINPFAGAG 370 VAINPF G+G Sbjct: 361 VAINPFIGSG 370 >ref|YP_001889908.1| gluconate 2-dehydrogenase [Burkholderia phytofirmans PsJN] gb|ACD20537.1| Gluconate 2-dehydrogenase (acceptor) [Burkholderia phytofirmans PsJN] Length = 594 Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust. Identities = 274/370 (74%), Positives = 321/370 (86%) Query: 1 MADITKPKVDVVLVGMGWSGSIMGMEMTEAGLSVVGLERGETRDTNPDFAYPKIADELTY 60 MA+I+KPKVD V+VGMGWSGSIM +E+ +AGL+VVGLERGE RDT PDFAYPK+ADELT+ Sbjct: 1 MANISKPKVDAVVVGMGWSGSIMAIELADAGLTVVGLERGENRDTYPDFAYPKVADELTH 60 Query: 61 AQRYKLMQNLSKETVTVRHSPNDDALPYRQLGSFLLGNGLGGAGVHWNGVTWRAYDAELQ 120 QR+KLMQ+L+ ETVT+R + ALP RQ G+FL G+G+GG+GVHWNG T+RA +AEL+ Sbjct: 61 VQRFKLMQSLAHETVTIRRQAQEVALPLRQYGAFLFGDGVGGSGVHWNGFTYRATEAELK 120 Query: 121 MRSHYEQRYGKRFIPVDMTIQDWPMTYAELEPFYDRFEYVAGVSGKAGNLDGKIIEGGNV 180 +RSHYEQRYGK FIP DMTIQDWP++ AELEPFYDRFEYVAG SGKAGNL+G+ + GGN Sbjct: 121 LRSHYEQRYGKGFIPDDMTIQDWPVSAAELEPFYDRFEYVAGTSGKAGNLNGQSVGGGNP 180 Query: 181 FEAPRKREYPLPPLKNNAPATLFETAAREVGYHPFPIPAANASQAYQNPYGMQLGPCNYC 240 FEAPR R+Y LPPL P+ LF+ AAREVGYHP+P PA+ AS+AY NPYGMQLGPCN+C Sbjct: 181 FEAPRSRDYALPPLPTAYPSMLFDQAAREVGYHPYPTPASIASKAYTNPYGMQLGPCNFC 240 Query: 241 GYCERFGCYMYAKASPQTCILPALLKKPNFELRDKSYVTRINLAGDGKRATGVTYIDAQG 300 GYCE FGCYM++KASPQ+CILPAL +KPNFELRD+S V ++NL GKRATGVTYIDAQG Sbjct: 241 GYCELFGCYMFSKASPQSCILPALARKPNFELRDRSAVVKVNLDSTGKRATGVTYIDAQG 300 Query: 301 RSVEQPADLVILCAYQMHNVRLLLLSGIGKPYDPKTGDGVVGKNYAYQKNSSVSLFFDKD 360 +VEQPAD+V LCAYQMHNVRLLLLSGIGKPYDP TG+G VGKNYAYQKNS + +FFDKD Sbjct: 301 HTVEQPADIVALCAYQMHNVRLLLLSGIGKPYDPATGEGTVGKNYAYQKNSKIQVFFDKD 360 Query: 361 VAINPFAGAG 370 VAINPF G+G Sbjct: 361 VAINPFIGSG 370 >ref|ZP_07950277.1| gluconate 2-dehydrogenase subunit protein [Enterobacteriaceae bacterium 9_2_54FAA] gb|EFV41600.1| gluconate 2-dehydrogenase subunit protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 592 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 251/381 (65%), Positives = 300/381 (78%) Query: 1 MADITKPKVDVVLVGMGWSGSIMGMEMTEAGLSVVGLERGETRDTNPDFAYPKIADELTY 60 M I K VDVV+VG GW+G+IMGMEMT+AGLSVV LERGE RDT PDFAYP+IADELTY Sbjct: 1 MTTIKKEPVDVVIVGFGWTGAIMGMEMTDAGLSVVALERGEKRDTYPDFAYPRIADELTY 60 Query: 61 AQRYKLMQNLSKETVTVRHSPNDDALPYRQLGSFLLGNGLGGAGVHWNGVTWRAYDAELQ 120 R KL Q SKETVTVRH+P D A+PYRQ GSFL GNG+GGAGVHWNG+ WRA ++L+ Sbjct: 61 GIRLKLFQEASKETVTVRHNPGDYAVPYRQFGSFLPGNGVGGAGVHWNGMHWRALPSDLK 120 Query: 121 MRSHYEQRYGKRFIPVDMTIQDWPMTYAELEPFYDRFEYVAGVSGKAGNLDGKIIEGGNV 180 M + +RYGK FIP M +QD+P++Y +LEPF+D+FE V G +GK+GNL GKII+GGN Sbjct: 121 MHTTVMERYGKSFIPEGMLLQDYPVSYDDLEPFFDKFEKVCGTAGKSGNLQGKIIDGGNP 180 Query: 181 FEAPRKREYPLPPLKNNAPATLFETAAREVGYHPFPIPAANASQAYQNPYGMQLGPCNYC 240 FE PR EYP PPLK TLF AA+E+GYHPF IPAAN SQ Y NPYG+QLGPCNYC Sbjct: 181 FEGPRMSEYPTPPLKQLYSGTLFSQAAKELGYHPFAIPAANCSQPYTNPYGVQLGPCNYC 240 Query: 241 GYCERFGCYMYAKASPQTCILPALLKKPNFELRDKSYVTRINLAGDGKRATGVTYIDAQG 300 G+CERFGC+MY+K SPQ+ ILP L ++ NFELR S V ++NL GK+ATGVTY+DAQG Sbjct: 241 GFCERFGCFMYSKGSPQSTILPVLTQRKNFELRANSMVIKVNLDSSGKKATGVTYVDAQG 300 Query: 301 RSVEQPADLVILCAYQMHNVRLLLLSGIGKPYDPKTGDGVVGKNYAYQKNSSVSLFFDKD 360 R +EQPA +VIL AYQ+HNVRLLLLSGIG PY+P+TG+G+VG+NYAYQ NS +S+FFDKD Sbjct: 301 REIEQPASIVILSAYQLHNVRLLLLSGIGTPYNPQTGEGMVGRNYAYQMNSGISVFFDKD 360 Query: 361 VAINPFAGAGXPAARCSTIST 381 NPF GAG A ++ Sbjct: 361 TNFNPFIGAGAAGAVIDDFNS 381 >ref|YP_001478246.1| gluconate 2-dehydrogenase [Serratia proteamaculans 568] gb|ABV41118.1| Gluconate 2-dehydrogenase (acceptor) [Serratia proteamaculans 568] Length = 592 Score = 541 bits (1394), Expect = e-152, Method: Compositional matrix adjust. Identities = 247/370 (66%), Positives = 304/370 (82%) Query: 1 MADITKPKVDVVLVGMGWSGSIMGMEMTEAGLSVVGLERGETRDTNPDFAYPKIADELTY 60 M+ I KP VDVV+VG GW+G+IMGME+TE+GLSV+ LERGE RDT PDFAYP+IADELTY Sbjct: 1 MSAIKKPPVDVVIVGFGWTGAIMGMELTESGLSVLALERGEQRDTYPDFAYPRIADELTY 60 Query: 61 AQRYKLMQNLSKETVTVRHSPNDDALPYRQLGSFLLGNGLGGAGVHWNGVTWRAYDAELQ 120 R KLMQ ++ ETVTVRH+P D A+PYRQLGSFL GNG+GGAGVHWNG+ WRA ++L+ Sbjct: 61 GIRMKLMQAMANETVTVRHTPADFAVPYRQLGSFLPGNGVGGAGVHWNGMHWRALPSDLK 120 Query: 121 MRSHYEQRYGKRFIPVDMTIQDWPMTYAELEPFYDRFEYVAGVSGKAGNLDGKIIEGGNV 180 + + ++YG ++IP MT+QD+P++Y ELEP++D+FE V G +GKAGNL G+II+GGN Sbjct: 121 LHTTLNEKYGAKWIPEGMTLQDYPLSYQELEPYFDKFEKVCGTAGKAGNLRGQIIKGGNP 180 Query: 181 FEAPRKREYPLPPLKNNAPATLFETAAREVGYHPFPIPAANASQAYQNPYGMQLGPCNYC 240 FE PR EYP P LK +LF AA +GYHPF +PAAN S+ Y NPYG+QLGPCNYC Sbjct: 181 FEGPRNSEYPTPALKRLYSGSLFAPAAESLGYHPFSVPAANCSEPYTNPYGVQLGPCNYC 240 Query: 241 GYCERFGCYMYAKASPQTCILPALLKKPNFELRDKSYVTRINLAGDGKRATGVTYIDAQG 300 GYCERFGC+MY+KASPQ+ ILP L ++ NFELR +S V ++NL GK+ATGVTYI+AQG Sbjct: 241 GYCERFGCFMYSKASPQSTILPVLTQRKNFELRTQSQVIKVNLDSTGKKATGVTYINAQG 300 Query: 301 RSVEQPADLVILCAYQMHNVRLLLLSGIGKPYDPKTGDGVVGKNYAYQKNSSVSLFFDKD 360 + VEQPADLVIL A+Q+HNVRLLLLSGIGKPY+P TG+GVVGKNYAYQ NS++SLF+DKD Sbjct: 301 QEVEQPADLVILSAFQLHNVRLLLLSGIGKPYNPVTGEGVVGKNYAYQMNSNISLFYDKD 360 Query: 361 VAINPFAGAG 370 + NPF GAG Sbjct: 361 IHFNPFIGAG 370 >ref|YP_003979723.1| gluconate 2-dehydrogenase flavoprotein [Achromobacter xylosoxidans A8] gb|ADP17008.1| gluconate 2-dehydrogenase flavoprotein [Achromobacter xylosoxidans A8] Length = 591 Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust. Identities = 244/367 (66%), Positives = 289/367 (78%) Query: 4 ITKPKVDVVLVGMGWSGSIMGMEMTEAGLSVVGLERGETRDTNPDFAYPKIADELTYAQR 63 I K KVD VLVG GW+G+I+G E+TEAGL V+ LERG +DT D YPK+ADEL Y+ R Sbjct: 3 IKKDKVDAVLVGFGWTGAILGQELTEAGLHVLALERGAMQDTPKDAEYPKVADELAYSVR 62 Query: 64 YKLMQNLSKETVTVRHSPNDDALPYRQLGSFLLGNGLGGAGVHWNGVTWRAYDAELQMRS 123 KL Q+LSKETVT+RH +D A+PYRQ GSFLLG G+GGAG HWNG+ +R EL++RS Sbjct: 63 GKLFQDLSKETVTIRHGVDDVAVPYRQNGSFLLGTGVGGAGFHWNGMHYRVLPEELELRS 122 Query: 124 HYEQRYGKRFIPVDMTIQDWPMTYAELEPFYDRFEYVAGVSGKAGNLDGKIIEGGNVFEA 183 YE RYGK FIP MTIQD+ +TY ELEP++ +FEYV G SGKAGNL+G+I+ GGN E Sbjct: 123 RYETRYGKSFIPEGMTIQDFGVTYDELEPYFSKFEYVCGTSGKAGNLNGQIVAGGNPLEG 182 Query: 184 PRKREYPLPPLKNNAPATLFETAAREVGYHPFPIPAANASQAYQNPYGMQLGPCNYCGYC 243 R +E+PLPPL A LF+ AAREVG+HP+P PAANAS Y NPYG++LGPCN+CG+C Sbjct: 183 KRSKEFPLPPLTTTYGAQLFDKAAREVGFHPYPAPAANASGPYTNPYGVRLGPCNFCGFC 242 Query: 244 ERFGCYMYAKASPQTCILPALLKKPNFELRDKSYVTRINLAGDGKRATGVTYIDAQGRSV 303 E +GCYMY+KASPQT ILP LLKKPNFELR +S+V ++NL GK+A GVTYIDAQGR + Sbjct: 243 ENYGCYMYSKASPQTTILPVLLKKPNFELRTQSHVIKVNLDSSGKKAVGVTYIDAQGREI 302 Query: 304 EQPADLVILCAYQMHNVRLLLLSGIGKPYDPKTGDGVVGKNYAYQKNSSVSLFFDKDVAI 363 EQPADLVIL AYQMHNVRLLLLSGIGKPYDPKT +GVVGKNYAYQ N VS+ K + Sbjct: 303 EQPADLVILSAYQMHNVRLLLLSGIGKPYDPKTNEGVVGKNYAYQMNGGVSVLLPKGTQL 362 Query: 364 NPFAGAG 370 NPF G G Sbjct: 363 NPFVGTG 369