BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0017.p (260 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776830.1| short chain dehydrogenase [Herbaspirillum se... 443 e-122 ref|YP_999417.1| short-chain dehydrogenase/reductase SDR [Vermin... 418 e-115 ref|YP_003976325.1| short chain dehydrogenase family protein 2 [... 332 3e-89 gb|EFV85910.1| short-chain dehydrogenase/reductase SDR [Achromob... 318 5e-85 gb|EGP47067.1| short chain dehydrogenase family protein 2 [Achro... 315 4e-84 >ref|YP_003776830.1| short chain dehydrogenase [Herbaspirillum seropedicae SmR1] gb|ADJ64922.1| short chain dehydrogenase protein [Herbaspirillum seropedicae SmR1] Length = 261 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 209/261 (80%), Positives = 243/261 (93%), Gaps = 1/261 (0%) Query: 1 MNTSLKDQRVVVTAGAQGIGLAITASFVEAGAHVHICDVSDDFLDSARKQFAHAPVSYSK 60 M+ +LKDQ+V+VTAGAQGIGLAITA+FVEAGAHVHICDVS+DFL SAR +F HAPVSYS+ Sbjct: 1 MDLNLKDQKVIVTAGAQGIGLAITAAFVEAGAHVHICDVSEDFLASARARFGHAPVSYSR 60 Query: 61 TDVANEAQVDAMFAELAQRW-GTLDVLVNNAGIAGPTAKVEETELSAWDQTIAVNLTGPF 119 TDV++E +VDAMFA+LAQRW G LDVL+NNAGIAGPT+ VEE LS WDQT+AVNLTGPF Sbjct: 61 TDVSSEREVDAMFADLAQRWSGRLDVLINNAGIAGPTSPVEEVALSDWDQTLAVNLTGPF 120 Query: 120 LCTRRAVPLLKKAGGGSIVNISSAAGRLGFPLRTPYSASKFGVIGLTESWAMELGPANIR 179 LCTRRAVPLLKK GGG+IVNISS AGRLGF LRTPYSASK+GVIGLTE+WA+ELGP++IR Sbjct: 121 LCTRRAVPLLKKNGGGAIVNISSVAGRLGFALRTPYSASKYGVIGLTETWAIELGPSHIR 180 Query: 180 VNAILPGIVAGERQERVIAAKAASYNIGHEEMRERLLSKVSMRKMVTAQDIANQIIYICS 239 VNA+LPGIV G RQER++AAKAA+Y IGHEEMR+RLLS+VS+RKMVTA+DIANQ+I++CS Sbjct: 181 VNAVLPGIVEGARQERIVAAKAAAYGIGHEEMRQRLLSRVSLRKMVTAEDIANQVIFLCS 240 Query: 240 PAGSAISGQSLSVCGNVEHLG 260 PAG++ISGQSLSVCGNVE LG Sbjct: 241 PAGASISGQSLSVCGNVEVLG 261 >ref|YP_999417.1| short-chain dehydrogenase/reductase SDR [Verminephrobacter eiseniae EF01-2] gb|ABM60399.1| short-chain dehydrogenase/reductase SDR [Verminephrobacter eiseniae EF01-2] Length = 258 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 204/260 (78%), Positives = 228/260 (87%), Gaps = 2/260 (0%) Query: 1 MNTSLKDQRVVVTAGAQGIGLAITASFVEAGAHVHICDVSDDFLDSARKQFAHAPVSYSK 60 M+ L +RV+VTAGAQGIGLAIT +FV AGA VHICDV + FL A +Q + +S+ Sbjct: 1 MDIGLNGKRVLVTAGAQGIGLAITEAFVAAGAQVHICDVDEGFLAQATRQLPQ--LCHSR 58 Query: 61 TDVANEAQVDAMFAELAQRWGTLDVLVNNAGIAGPTAKVEETELSAWDQTIAVNLTGPFL 120 TDV++ AQVDAMFA +A+RWG LDVLVNNAGIAGPT+ VE+T L+ W+QTIAVNLTGPFL Sbjct: 59 TDVSDAAQVDAMFAGIAERWGRLDVLVNNAGIAGPTSAVEDTALADWEQTIAVNLTGPFL 118 Query: 121 CTRRAVPLLKKAGGGSIVNISSAAGRLGFPLRTPYSASKFGVIGLTESWAMELGPANIRV 180 CTRRAVPLLK AGGGSIVN+SSAAGRLGFPLRTPYSASKFGVIGLTESWAMELGP+ IRV Sbjct: 119 CTRRAVPLLKAAGGGSIVNLSSAAGRLGFPLRTPYSASKFGVIGLTESWAMELGPSRIRV 178 Query: 181 NAILPGIVAGERQERVIAAKAASYNIGHEEMRERLLSKVSMRKMVTAQDIANQIIYICSP 240 NAILPGIVAG RQERVIAA+AASY I HE MRERLLSKVS+R MVTAQDIANQI++ICSP Sbjct: 179 NAILPGIVAGARQERVIAARAASYGIDHEAMRERLLSKVSLRSMVTAQDIANQIVFICSP 238 Query: 241 AGSAISGQSLSVCGNVEHLG 260 AG+ ISGQSLSVCGNVEHLG Sbjct: 239 AGATISGQSLSVCGNVEHLG 258 >ref|YP_003976325.1| short chain dehydrogenase family protein 2 [Achromobacter xylosoxidans A8] gb|ADP13610.1| short chain dehydrogenase family protein 2 [Achromobacter xylosoxidans A8] Length = 258 Score = 332 bits (851), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 163/260 (62%), Positives = 211/260 (81%), Gaps = 2/260 (0%) Query: 1 MNTSLKDQRVVVTAGAQGIGLAITASFVEAGAHVHICDVSDDFLDSARKQFAHAPVSYSK 60 M+ SL+ +RV++TAGAQGIGLAI F+EAGA VH+CDV + +A + H + S Sbjct: 1 MSNSLQGKRVLITAGAQGIGLAIARRFLEAGAEVHVCDVDEAACKAAAAE--HPRLGVSV 58 Query: 61 TDVANEAQVDAMFAELAQRWGTLDVLVNNAGIAGPTAKVEETELSAWDQTIAVNLTGPFL 120 TDV++EAQV AMF EL ++WG LD LVNNAG++GPT ++EET L AW +T+ VNLTG FL Sbjct: 59 TDVSSEAQVQAMFGELTEKWGKLDALVNNAGVSGPTNRLEETTLDAWQRTLDVNLTGTFL 118 Query: 121 CTRRAVPLLKKAGGGSIVNISSAAGRLGFPLRTPYSASKFGVIGLTESWAMELGPANIRV 180 C R AVPLL+ AGGG+IVNISS AGRLGF LRTPYSASKFG+ GLT++WAMELGP+NIRV Sbjct: 119 CARSAVPLLRAAGGGAIVNISSVAGRLGFSLRTPYSASKFGLAGLTQTWAMELGPSNIRV 178 Query: 181 NAILPGIVAGERQERVIAAKAASYNIGHEEMRERLLSKVSMRKMVTAQDIANQIIYICSP 240 N++LPG+V+G+R ER+IAA+AA+ + ++ MRE+L+ KVS+R+M + QDIANQ+ Y+CS Sbjct: 179 NSVLPGVVSGDRVERIIAARAAASGVSNDAMREQLVDKVSLRRMTSPQDIANQVAYLCSD 238 Query: 241 AGSAISGQSLSVCGNVEHLG 260 G+ ISGQS+SVCGNVE+LG Sbjct: 239 EGAIISGQSISVCGNVEYLG 258 >gb|EFV85910.1| short-chain dehydrogenase/reductase SDR [Achromobacter xylosoxidans C54] Length = 258 Score = 318 bits (815), Expect = 5e-85, Method: Compositional matrix adjust. Identities = 164/260 (63%), Positives = 210/260 (80%), Gaps = 2/260 (0%) Query: 1 MNTSLKDQRVVVTAGAQGIGLAITASFVEAGAHVHICDVSDDFLDSARKQFAHAPVSYSK 60 M SLK +RV++TAGA GIGLAI F+ AGA VHICDV+ AHA +S S Sbjct: 1 MIESLKGKRVLITAGAGGIGLAIARKFLAAGARVHICDVA--AEAVQAAVQAHAGLSGSV 58 Query: 61 TDVANEAQVDAMFAELAQRWGTLDVLVNNAGIAGPTAKVEETELSAWDQTIAVNLTGPFL 120 TDVA+EAQV AMFAELA+RWG LD LVNNAG++GPT+++E+T+L+AW T+ VNLTG FL Sbjct: 59 TDVADEAQVLAMFAELAERWGKLDALVNNAGVSGPTSRLEDTDLAAWQATLDVNLTGTFL 118 Query: 121 CTRRAVPLLKKAGGGSIVNISSAAGRLGFPLRTPYSASKFGVIGLTESWAMELGPANIRV 180 C R AVPLL++AGGG+I+NISS AGRLGF LR+PYSASKFG+ GLT++WAMELGP+ IRV Sbjct: 119 CARSAVPLLREAGGGAIINISSVAGRLGFSLRSPYSASKFGLAGLTQTWAMELGPSGIRV 178 Query: 181 NAILPGIVAGERQERVIAAKAASYNIGHEEMRERLLSKVSMRKMVTAQDIANQIIYICSP 240 N++LPG+VAG+R ER+IAA+AA+ + ++ MR +L+ KVS+RKM +DIANQ+ ++CS Sbjct: 179 NSVLPGVVAGDRVERIIAARAAAGGVSNDAMRAQLVEKVSLRKMTQPEDIANQVAFLCSD 238 Query: 241 AGSAISGQSLSVCGNVEHLG 260 G+ ISGQS+SVCGNVE+LG Sbjct: 239 EGAMISGQSISVCGNVEYLG 258 >gb|EGP47067.1| short chain dehydrogenase family protein 2 [Achromobacter xylosoxidans AXX-A] Length = 258 Score = 315 bits (808), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 159/260 (61%), Positives = 208/260 (80%), Gaps = 2/260 (0%) Query: 1 MNTSLKDQRVVVTAGAQGIGLAITASFVEAGAHVHICDVSDDFLDSARKQFAHAPVSYSK 60 M SLK +RV++TAGA GIGLAI F+ +GA VHICDV+ AH +S S Sbjct: 1 MIESLKGKRVLITAGAGGIGLAIARKFLASGAQVHICDVA--AEAVQAAVQAHPGLSGSV 58 Query: 61 TDVANEAQVDAMFAELAQRWGTLDVLVNNAGIAGPTAKVEETELSAWDQTIAVNLTGPFL 120 TDV++EAQV AMFA+LA RWG LD LVNNAG++GPT+++E+T+L+AW T+ VNLTG FL Sbjct: 59 TDVSDEAQVLAMFADLATRWGRLDALVNNAGVSGPTSRLEDTDLAAWRATLDVNLTGTFL 118 Query: 121 CTRRAVPLLKKAGGGSIVNISSAAGRLGFPLRTPYSASKFGVIGLTESWAMELGPANIRV 180 C R AVPLL++AGGG+I+NISS AGRLGF LR+PYSASKFG+ GLT++WAMELGP+ IRV Sbjct: 119 CARSAVPLLREAGGGAIINISSVAGRLGFSLRSPYSASKFGLAGLTQTWAMELGPSGIRV 178 Query: 181 NAILPGIVAGERQERVIAAKAASYNIGHEEMRERLLSKVSMRKMVTAQDIANQIIYICSP 240 N++LPG+VAG+R ER+IAA+AA+ + ++ MR +L+ KVS+RKM +DIANQ+ ++CS Sbjct: 179 NSVLPGVVAGDRVERIIAARAAAGGVSNDAMRAQLVEKVSLRKMTQPEDIANQVAFLCSD 238 Query: 241 AGSAISGQSLSVCGNVEHLG 260 G+ +SGQS+SVCGNVE+LG Sbjct: 239 EGAMVSGQSISVCGNVEYLG 258