BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0016.p (269 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_999416.1| ABC transporter-like protein [Verminephrobacter... 342 4e-92 ref|YP_004304258.1| ABC transporter related protein [Polymorphum... 337 9e-91 ref|YP_917340.1| ABC transporter related [Paracoccus denitrifica... 257 1e-66 ref|ZP_06895161.1| ABC superfamily ATP binding cassette transpor... 254 1e-65 ref|YP_001755566.1| ABC transporter-like protein [Methylobacteri... 253 2e-65 >ref|YP_999416.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2] gb|ABM60398.1| ABC transporter related [Verminephrobacter eiseniae EF01-2] Length = 840 Score = 342 bits (876), Expect = 4e-92, Method: Compositional matrix adjust. Identities = 180/197 (91%), Positives = 186/197 (94%) Query: 73 GKSTLLKALTGLLKPASGAIRYNGKDIAGLSAPDIARLGIGYVPQGRGLFAGMTVAENLS 132 GKSTLLK LTGLLKPASG I Y G+DIAGLSAPDIAR+GIGYVPQGRGLF+GMTVAENLS Sbjct: 644 GKSTLLKTLTGLLKPASGRIEYAGRDIAGLSAPDIARMGIGYVPQGRGLFSGMTVAENLS 703 Query: 133 LGRLARKTDSSNGIAWSEEKILHYFPRLKERLHTPADFLSGGEQQMVAVARALSGNVRLL 192 LGRLARKTD S G WSEEKIL YFPRLKERLHT ADFLSGGEQQMVAVARALSGNVRLL Sbjct: 704 LGRLARKTDGSTGTVWSEEKILQYFPRLKERLHTHADFLSGGEQQMVAVARALSGNVRLL 763 Query: 193 LLDEPFEGLAPAVVQELFTVFDQLRREVSIVIVEHNLDLVLALADRVFALERGAVFHTGP 252 LLDEPFEGLAPAVVQELFTVFD+LR+EV+IVIVEHNLDLVLALADRVFALERGAVFHTGP Sbjct: 764 LLDEPFEGLAPAVVQELFTVFDRLRKEVAIVIVEHNLDLVLALADRVFALERGAVFHTGP 823 Query: 253 AEPLLTDLTYRKQILWL 269 A PLLTDLTYRKQILWL Sbjct: 824 AAPLLTDLTYRKQILWL 840 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 13/193 (6%) Query: 73 GKSTLLKALTGLLKPASGAIRYNGKDIAGLSAPDIARLGIGYVPQGRGLFAGMTVAENLS 132 GK+T ++G+ P++G++R +G +I GL+ I + G+ Q LF G+++ ENL Sbjct: 383 GKTTTFNLISGMFAPSNGSVRLHGHEIQGLAPQQICQQGLARSFQITNLFRGLSIYENLR 442 Query: 133 LGRLARKTDSSNGIAW----------SEEKILHYFPRLKERLHTPADFLSGGEQQMVAVA 182 L AR N W +E L F L+ LS G Q++V + Sbjct: 443 LSLQARHPARFN--MWRDIDRYPEIHAETGELMKFLGLQGIEQIEGGALSYGGQRLVDLG 500 Query: 183 RALSGNVRLLLLDEPFEGLAPAVVQELFTVFDQLRREVSIVIVEHNLDLVLALADRVFAL 242 AL ++LL+DEP GLA A + + + + + ++IVEH++D VL L+ +V + Sbjct: 501 IALGSKPQVLLMDEPLAGLAAAERERVSHLVKTIASNIPVLIVEHDIDRVLGLSQQVTVM 560 Query: 243 ERGAVFHTG-PAE 254 +G+V TG PAE Sbjct: 561 NQGSVLMTGTPAE 573 >ref|YP_004304258.1| ABC transporter related protein [Polymorphum gilvum SL003B-26A1] gb|ADZ70955.1| ABC transporter related protein [Polymorphum gilvum SL003B-26A1] Length = 844 Score = 337 bits (865), Expect = 9e-91, Method: Compositional matrix adjust. Identities = 161/197 (81%), Positives = 182/197 (92%) Query: 73 GKSTLLKALTGLLKPASGAIRYNGKDIAGLSAPDIARLGIGYVPQGRGLFAGMTVAENLS 132 GKSTLLK+L GL+ ASG+IR+ G+D+AG++APDIARLG+GYVPQGRG+FAGM+VAENLS Sbjct: 648 GKSTLLKSLAGLVPAASGSIRFAGRDLAGMAAPDIARLGVGYVPQGRGIFAGMSVAENLS 707 Query: 133 LGRLARKTDSSNGIAWSEEKILHYFPRLKERLHTPADFLSGGEQQMVAVARALSGNVRLL 192 LGRLAR TD S G+ WSEE+IL FPRLKER HTPAD+LSGGEQQM+AVARALSGNVRLL Sbjct: 708 LGRLARATDGSTGVVWSEERILEMFPRLKERFHTPADYLSGGEQQMLAVARALSGNVRLL 767 Query: 193 LLDEPFEGLAPAVVQELFTVFDQLRREVSIVIVEHNLDLVLALADRVFALERGAVFHTGP 252 LLDEPFEGLAPA+V+ELFTVFDQLRR++ I+IVEHNLDLVLALADRVFALERGAVFH GP Sbjct: 768 LLDEPFEGLAPAIVEELFTVFDQLRRQLPILIVEHNLDLVLALADRVFALERGAVFHEGP 827 Query: 253 AEPLLTDLTYRKQILWL 269 AE LLTD+ YRKQILWL Sbjct: 828 AEALLTDIDYRKQILWL 844 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 18/200 (9%) Query: 73 GKSTLLKALTGLLKPASGAIRYNGKDIAGLSAPDIARLGIGYVPQGRGLFAGMTVAENLS 132 GK+T ++G+ P +G I NG + GL A I LG+ Q LF G+++ ENL Sbjct: 387 GKTTTFNLISGMFPPDAGTIHLNGTPVHGLPANRITELGLARSFQITNLFEGLSIYENLR 446 Query: 133 LGRLARKTDSSNGIAWSEEKILHYFPRLKERLHTPADFL-------------SGGEQQMV 179 L A+ N W + + FP + ++ FL S G Q++V Sbjct: 447 LSVQAKHPSRFN--LWRD---IDSFPDMHDQTAELMKFLGLEGIDDIQGGDLSYGGQRLV 501 Query: 180 AVARALSGNVRLLLLDEPFEGLAPAVVQELFTVFDQLRREVSIVIVEHNLDLVLALADRV 239 + AL+ ++LLLDEP GLA A + + ++ ++ + ++IVEH+LD VL+L+ V Sbjct: 502 DLGIALACKPQILLLDEPLAGLAAAERERVTSLVRRMAENIPVLIVEHDLDRVLSLSHDV 561 Query: 240 FALERGAVFHTGPAEPLLTD 259 + +G V TG + + D Sbjct: 562 TVMNQGEVLMTGAPDAVRAD 581 >ref|YP_917340.1| ABC transporter related [Paracoccus denitrificans PD1222] gb|ABL71644.1| amino acid/amide ABC transporter ATP-binding protein 2, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family [Paracoccus denitrificans PD1222] Length = 838 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 125/197 (63%), Positives = 157/197 (79%), Gaps = 2/197 (1%) Query: 73 GKSTLLKALTGLLKPASGAIRYNGKDIAGLSAPDIARLGIGYVPQGRGLFAGMTVAENLS 132 GKS++LKA+TG++ P+SG++R ++AGLS+ IARLGIGYVPQGRGLFAGMTV ENL Sbjct: 644 GKSSVLKAVTGIVPPSSGSVRLMEHELAGLSSARIARLGIGYVPQGRGLFAGMTVRENLE 703 Query: 133 LGRLARKTDSSNGIAWSEEKILHYFPRLKERLHTPADFLSGGEQQMVAVARALSGNVRLL 192 LGR+ R+T G WS E+IL YFPRL+ERL TPAD +SGGEQQM AVARALSG++R+L Sbjct: 704 LGRIRRQT--GEGTHWSLEEILEYFPRLRERLDTPADSMSGGEQQMAAVARALSGDIRVL 761 Query: 193 LLDEPFEGLAPAVVQELFTVFDQLRREVSIVIVEHNLDLVLALADRVFALERGAVFHTGP 252 LLDEPFEGLAPAVV++LF FD+LR +SIVIV+HNLDL LAL+DR LERG V H Sbjct: 762 LLDEPFEGLAPAVVEQLFRTFDKLRDRLSIVIVDHNLDLALALSDRTIVLERGRVLHEIE 821 Query: 253 AEPLLTDLTYRKQILWL 269 + + D+ R+++LW+ Sbjct: 822 SRRIAEDIELRREMLWM 838 Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 8/190 (4%) Query: 73 GKSTLLKALTGLLKPASGAIRYNGKDIAGLSAPDIARLGIGYVPQGRGLFAGMTVAENLS 132 GK+T ++G++ ++G + + G+DI+G SA I+ LG+G Q LF +TV EN+ Sbjct: 383 GKTTAFNLMSGIIPTSAGGVSFMGQDISGKSADHISNLGLGRSFQITNLFPELTVRENIR 442 Query: 133 LGRLAR---KTD---SSNGIAWSEEKI--LHYFPRLKERLHTPADFLSGGEQQMVAVARA 184 L AR ++D S+ IA EK+ + + L + A LS G Q+++ + A Sbjct: 443 LAVQARDPSRSDMLCSTASIAQVHEKVEEMINWVGLAGMENARAGSLSYGGQRLLDLGLA 502 Query: 185 LSGNVRLLLLDEPFEGLAPAVVQELFTVFDQLRREVSIVIVEHNLDLVLALADRVFALER 244 L+ R+LL DEP GL+ A + + + + + + +++VEH++D V LAD V + Sbjct: 503 LATEPRILLADEPLAGLSVAERERVGLLIKDVSKSLPVLLVEHDIDRVFELADHVTVMAD 562 Query: 245 GAVFHTGPAE 254 G V G + Sbjct: 563 GKVLVDGTVD 572 >ref|ZP_06895161.1| ABC superfamily ATP binding cassette transporter ATP-binding/permease [Roseomonas cervicalis ATCC 49957] gb|EFH13132.1| ABC superfamily ATP binding cassette transporter ATP-binding/permease [Roseomonas cervicalis ATCC 49957] Length = 835 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 127/197 (64%), Positives = 156/197 (79%), Gaps = 2/197 (1%) Query: 73 GKSTLLKALTGLLKPASGAIRYNGKDIAGLSAPDIARLGIGYVPQGRGLFAGMTVAENLS 132 GKSTLLK++ G+ +PA G + G+ +AGL + IAR G+G+VPQGRGLFAGM+VAENL+ Sbjct: 641 GKSTLLKSVMGITRPARGQMMLAGEQVAGLPSDQIARRGVGFVPQGRGLFAGMSVAENLA 700 Query: 133 LGRLARKTDSSNGIAWSEEKILHYFPRLKERLHTPADFLSGGEQQMVAVARALSGNVRLL 192 LGRL R T + G W EEK+L +FPRLK+R TPAD LSGGEQQMVAVARALSG+ RLL Sbjct: 701 LGRLKRLTGA--GQHWEEEKVLEFFPRLKQRWRTPADALSGGEQQMVAVARALSGDTRLL 758 Query: 193 LLDEPFEGLAPAVVQELFTVFDQLRREVSIVIVEHNLDLVLALADRVFALERGAVFHTGP 252 LLDEPFEGL+PAV +ELF FD+LR+E+SI+IV+HNLDL LAL+D ALERGAV TG Sbjct: 759 LLDEPFEGLSPAVTEELFEAFDRLRQEISIIIVDHNLDLALALSDSTVALERGAVTWTGE 818 Query: 253 AEPLLTDLTYRKQILWL 269 + L DL R+++LWL Sbjct: 819 SAVLRDDLDLRRKVLWL 835 Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 84/262 (32%), Positives = 122/262 (46%), Gaps = 24/262 (9%) Query: 15 TPADDKGMYYAVNTMQPAYQPSNVAAPASD-AAKLYADPDSASTLPPQTQKNI----GD- 68 TP +D M A T P P P SD + L AD S Q K + GD Sbjct: 310 TPVEDAAMS-ARRTTVPEPVPPRFIRPGSDTSCVLEADALKKSFGRIQAVKGVSFAVGDR 368 Query: 69 ----LLS---XGKSTLLKALTGLLKPASGAIRYNGKDIAGLSAPDIARLGIGYVPQGRGL 121 L+ GK++ L+G+ P SG + +G+D+ G+ I GIG Q L Sbjct: 369 KLHALIGPNGAGKTSAFNLLSGMFPPDSGRVLLDGRDVTGMEPQAITSAGIGRSFQITNL 428 Query: 122 FAGMTVAENLSLGR---------LARKTDSSNGIAWSEEKILHYFPRLKERLHTPADFLS 172 F G+++AENL L L R +S +A E +L + L A LS Sbjct: 429 FPGLSIAENLRLAVQARHAKRFGLWRSAESYADMAEDTEVLLRWMG-LAGIERAEAGALS 487 Query: 173 GGEQQMVAVARALSGNVRLLLLDEPFEGLAPAVVQELFTVFDQLRREVSIVIVEHNLDLV 232 G Q++V +A A++ R+LLLDEP GLA A + + ++ ++ +++VEH++D V Sbjct: 488 YGGQRLVDMAVAVATRPRILLLDEPLAGLATAERTRVGELIKRVSTDIPVLLVEHDIDRV 547 Query: 233 LALADRVFALERGAVFHTGPAE 254 ALADRV + G V G E Sbjct: 548 FALADRVTVMNDGEVLVDGSVE 569 >ref|YP_001755566.1| ABC transporter-like protein [Methylobacterium radiotolerans JCM 2831] gb|ACB24883.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831] Length = 852 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 132/197 (67%), Positives = 152/197 (77%), Gaps = 2/197 (1%) Query: 73 GKSTLLKALTGLLKPASGAIRYNGKDIAGLSAPDIARLGIGYVPQGRGLFAGMTVAENLS 132 GKSTLLK L G PA+G I GKDIAGLS IARLGIGYVPQGR LFAGMTVAENL Sbjct: 658 GKSTLLKTLIGTAPPAAGRIVLGGKDIAGLSPDRIARLGIGYVPQGRALFAGMTVAENLG 717 Query: 133 LGRLARKTDSSNGIAWSEEKILHYFPRLKERLHTPADFLSGGEQQMVAVARALSGNVRLL 192 LGRL R T + GI W EEK+L +FPRLKER A LSGGEQQMVAVARALSG+ RLL Sbjct: 718 LGRLRRLTGA--GIHWDEEKVLEFFPRLKERWTVDAARLSGGEQQMVAVARALSGDTRLL 775 Query: 193 LLDEPFEGLAPAVVQELFTVFDQLRREVSIVIVEHNLDLVLALADRVFALERGAVFHTGP 252 LLDEPFEGL+PAV +ELF FD+LRRE++I++V+H+LDL LAL+DR ALERG+V TG Sbjct: 776 LLDEPFEGLSPAVTEELFEAFDRLRREIAIILVDHHLDLALALSDRTVALERGSVQWTGA 835 Query: 253 AEPLLTDLTYRKQILWL 269 + L D R+++LWL Sbjct: 836 SRLLREDQELRRKVLWL 852 Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 10/188 (5%) Query: 73 GKSTLLKALTGLLKPASGAIRYNGKDIAGLSAPDIARLGIGYVPQGRGLFAGMTVAENLS 132 GK+T L+G+ +P+ G+IR +G +IAGL I R GIG Q LF G++V EN+ Sbjct: 397 GKTTAFNLLSGMFRPSGGSIRLDGSEIAGLEPHAITRAGIGRSFQITNLFPGLSVEENVR 456 Query: 133 LGRLARKTD---------SSNGIAWSEEKILHYFPRLKERLHTPADFLSGGEQQMVAVAR 183 L AR + IA ++L + L A LS G Q+++ + Sbjct: 457 LAVQARHAAHFSPWRDALAVREIADDTAELLRW-TGLSGIERAEAGSLSYGGQRLLDMGL 515 Query: 184 ALSGNVRLLLLDEPFEGLAPAVVQELFTVFDQLRREVSIVIVEHNLDLVLALADRVFALE 243 AL+ R+LLLDEP GLA A + + + L ++ +++VEH++D V LADRV + Sbjct: 516 ALATRPRVLLLDEPLAGLAAAERERVGDLIKALSADIPVLLVEHDIDRVFRLADRVTVMA 575 Query: 244 RGAVFHTG 251 GAV G Sbjct: 576 DGAVLVDG 583