BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0015.p (226 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_999416.1| ABC transporter-like protein [Verminephrobacter... 360 6e-98 ref|YP_004304258.1| ABC transporter related protein [Polymorphum... 310 7e-83 ref|YP_001415343.1| ABC transporter-like protein [Xanthobacter a... 249 3e-64 ref|ZP_06895161.1| ABC superfamily ATP binding cassette transpor... 246 3e-63 ref|YP_001755566.1| ABC transporter-like protein [Methylobacteri... 243 1e-62 >ref|YP_999416.1| ABC transporter-like protein [Verminephrobacter eiseniae EF01-2] gb|ABM60398.1| ABC transporter related [Verminephrobacter eiseniae EF01-2] Length = 840 Score = 360 bits (925), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 174/202 (86%), Positives = 189/202 (93%) Query: 1 MFVPNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQARHASRF 60 MF P++G+V+L+G EIQGL P QICQ+GLARSFQITNLF+GLSIYENLRLSLQARH +RF Sbjct: 394 MFAPSNGSVRLHGHEIQGLAPQQICQQGLARSFQITNLFRGLSIYENLRLSLQARHPARF 453 Query: 61 NMWKDIDSYPEIHAETDELMRFLGLKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLLMD 120 NMW+DID YPEIHAET ELM+FLGL+GI++IEGGALSYGGQRLVDLGIALGSKP VLLMD Sbjct: 454 NMWRDIDRYPEIHAETGELMKFLGLQGIEQIEGGALSYGGQRLVDLGIALGSKPQVLLMD 513 Query: 121 EPLAGLAAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSGTPDQ 180 EPLAGLAAAERERVS LVK IA NIPVLIVEHDIDRVLG SQQVTVMNQGSVLM+GTP + Sbjct: 514 EPLAGLAAAERERVSHLVKTIASNIPVLIVEHDIDRVLGLSQQVTVMNQGSVLMTGTPAE 573 Query: 181 ARADQRVQEIYTGTGTPPVTGR 202 ARADQRVQEIYTGTGTPPVTGR Sbjct: 574 ARADQRVQEIYTGTGTPPVTGR 595 Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 52/173 (30%), Positives = 84/173 (48%), Gaps = 8/173 (4%) Query: 4 PNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQARHASRFNMW 63 P G ++ G++I GL+ I + G+ Q LF G+++ ENL L AR Sbjct: 658 PASGRIEYAGRDIAGLSAPDIARMGIGYVPQGRGLFSGMTVAENLSLGRLAR-------- 709 Query: 64 KDIDSYPEIHAETDELMRFLGLKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLLMDEPL 123 K S + +E L F LK LS G Q++V + AL +LL+DEP Sbjct: 710 KTDGSTGTVWSEEKILQYFPRLKERLHTHADFLSGGEQQMVAVARALSGNVRLLLLDEPF 769 Query: 124 AGLAAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSG 176 GLA A + + + + + ++IVEH++D VL + +V + +G+V +G Sbjct: 770 EGLAPAVVQELFTVFDRLRKEVAIVIVEHNLDLVLALADRVFALERGAVFHTG 822 >ref|YP_004304258.1| ABC transporter related protein [Polymorphum gilvum SL003B-26A1] gb|ADZ70955.1| ABC transporter related protein [Polymorphum gilvum SL003B-26A1] Length = 844 Score = 310 bits (795), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 146/202 (72%), Positives = 173/202 (85%) Query: 1 MFVPNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQARHASRF 60 MF P+ GT+ LNG + GL +I + GLARSFQITNLF+GLSIYENLRLS+QA+H SRF Sbjct: 398 MFPPDAGTIHLNGTPVHGLPANRITELGLARSFQITNLFEGLSIYENLRLSVQAKHPSRF 457 Query: 61 NMWKDIDSYPEIHAETDELMRFLGLKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLLMD 120 N+W+DIDS+P++H +T ELM+FLGL+GID+I+GG LSYGGQRLVDLGIAL KP +LL+D Sbjct: 458 NLWRDIDSFPDMHDQTAELMKFLGLEGIDDIQGGDLSYGGQRLVDLGIALACKPQILLLD 517 Query: 121 EPLAGLAAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSGTPDQ 180 EPLAGLAAAERERV+ LV+ +A NIPVLIVEHD+DRVL S VTVMNQG VLM+G PD Sbjct: 518 EPLAGLAAAERERVTSLVRRMAENIPVLIVEHDLDRVLSLSHDVTVMNQGEVLMTGAPDA 577 Query: 181 ARADQRVQEIYTGTGTPPVTGR 202 RAD+RVQE+YTGTGTPPVTGR Sbjct: 578 VRADRRVQEVYTGTGTPPVTGR 599 Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 51/178 (28%), Positives = 84/178 (47%), Gaps = 8/178 (4%) Query: 7 GTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQARHASRFNMWKDI 66 G+++ G+++ G+ I + G+ Q +F G+S+ ENL L AR Sbjct: 665 GSIRFAGRDLAGMAAPDIARLGVGYVPQGRGIFAGMSVAENLSLGRLARATD-------- 716 Query: 67 DSYPEIHAETDELMRFLGLKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLLMDEPLAGL 126 S + +E L F LK LS G Q+++ + AL +LL+DEP GL Sbjct: 717 GSTGVVWSEERILEMFPRLKERFHTPADYLSGGEQQMLAVARALSGNVRLLLLDEPFEGL 776 Query: 127 AAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSGTPDQARAD 184 A A E + + + +P+LIVEH++D VL + +V + +G+V G + D Sbjct: 777 APAIVEELFTVFDQLRRQLPILIVEHNLDLVLALADRVFALERGAVFHEGPAEALLTD 834 >ref|YP_001415343.1| ABC transporter-like protein [Xanthobacter autotrophicus Py2] gb|ABS65686.1| ABC transporter related [Xanthobacter autotrophicus Py2] Length = 863 Score = 249 bits (635), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 118/208 (56%), Positives = 157/208 (75%) Query: 1 MFVPNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQARHASRF 60 MF PN G ++L G+ I GL P +C +GL+RSFQITNLF L++ ENLRL +QA H SR Sbjct: 419 MFPPNAGEIRLAGERIDGLAPEAVCMKGLSRSFQITNLFPTLTVEENLRLGVQATHKSRL 478 Query: 61 NMWKDIDSYPEIHAETDELMRFLGLKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLLMD 120 + W+D + PEI AET E+M FLG+ G+++ E GALSYGGQRL+D+G+AL S+P VLL+D Sbjct: 479 DPWRDAAAIPEIVAETREMMDFLGVAGMEKAEAGALSYGGQRLLDMGLALTSRPRVLLLD 538 Query: 121 EPLAGLAAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSGTPDQ 180 EPLAGLAAAER RVS L+K I+ +PVL+VEHDIDRV + VTVM G+VL+ GT + Sbjct: 539 EPLAGLAAAERTRVSNLIKQISAQVPVLLVEHDIDRVFELADAVTVMADGAVLVDGTVED 598 Query: 181 ARADQRVQEIYTGTGTPPVTGRNRCSAA 208 AR++++VQE+Y G+G+ + R+ SAA Sbjct: 599 ARSNKKVQEVYIGSGSAALASRDLQSAA 626 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 22/179 (12%) Query: 4 PNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENL------RLSLQARHA 57 P G++ L G E+ GL+ I +RG+ Q LF G+S+ NL R++ RH Sbjct: 683 PASGSIMLAGDELAGLSSAAIARRGVGYVPQGRALFHGMSVRHNLELGRLKRITGAGRH- 741 Query: 58 SRFNMWKDIDSYPEIHAETDELMRFLGLKGIDEIEGGALSYGGQRLVDLGIALGSKPHVL 117 F+ + ++ +P + D LS G Q++V + AL VL Sbjct: 742 --FSEEEVLELFPRLKVRLDT-------------AADLLSGGEQQMVAVARALMGDTRVL 786 Query: 118 LMDEPLAGLAAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSG 176 L+DEP GL+ A E + + ++ ++IV+H +D VL + + V+ +G V+ G Sbjct: 787 LLDEPFEGLSPAVTEELFDAFDRLRQSLTLVIVDHHLDVVLNLADRAVVLERGQVMHEG 845 >ref|ZP_06895161.1| ABC superfamily ATP binding cassette transporter ATP-binding/permease [Roseomonas cervicalis ATCC 49957] gb|EFH13132.1| ABC superfamily ATP binding cassette transporter ATP-binding/permease [Roseomonas cervicalis ATCC 49957] Length = 835 Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 113/210 (53%), Positives = 154/210 (73%) Query: 1 MFVPNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQARHASRF 60 MF P+ G V L+G+++ G+ P I G+ RSFQITNLF GLSI ENLRL++QARHA RF Sbjct: 391 MFPPDSGRVLLDGRDVTGMEPQAITSAGIGRSFQITNLFPGLSIAENLRLAVQARHAKRF 450 Query: 61 NMWKDIDSYPEIHAETDELMRFLGLKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLLMD 120 +W+ +SY ++ +T+ L+R++GL GI+ E GALSYGGQRLVD+ +A+ ++P +LL+D Sbjct: 451 GLWRSAESYADMAEDTEVLLRWMGLAGIERAEAGALSYGGQRLVDMAVAVATRPRILLLD 510 Query: 121 EPLAGLAAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSGTPDQ 180 EPLAGLA AER RV L+K ++ +IPVL+VEHDIDRV + +VTVMN G VL+ G+ + Sbjct: 511 EPLAGLATAERTRVGELIKRVSTDIPVLLVEHDIDRVFALADRVTVMNDGEVLVDGSVED 570 Query: 181 ARADQRVQEIYTGTGTPPVTGRNRCSAAHP 210 AR D RVQ +Y G+G + + R SAA P Sbjct: 571 ARGDARVQAVYLGSGAAAIAAKPRPSAASP 600 Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 55/181 (30%), Positives = 81/181 (44%), Gaps = 10/181 (5%) Query: 4 PNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQARHASRFNMW 63 P G + L G+++ GL QI +RG+ Q LF G+S+ ENL L R W Sbjct: 655 PARGQMMLAGEQVAGLPSDQIARRGVGFVPQGRGLFAGMSVAENLALGRLKRLTGAGQHW 714 Query: 64 KDIDSYPEIHAETDELMRFLGLKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLLMDEPL 123 + E L F LK ALS G Q++V + AL +LL+DEP Sbjct: 715 E----------EEKVLEFFPRLKQRWRTPADALSGGEQQMVAVARALSGDTRLLLLDEPF 764 Query: 124 AGLAAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSGTPDQARA 183 GL+ A E + + I ++IV+H++D L S + +G+V +G R Sbjct: 765 EGLSPAVTEELFEAFDRLRQEISIIIVDHNLDLALALSDSTVALERGAVTWTGESAVLRD 824 Query: 184 D 184 D Sbjct: 825 D 825 >ref|YP_001755566.1| ABC transporter-like protein [Methylobacterium radiotolerans JCM 2831] gb|ACB24883.1| ABC transporter related [Methylobacterium radiotolerans JCM 2831] Length = 852 Score = 243 bits (620), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 116/209 (55%), Positives = 156/209 (74%) Query: 1 MFVPNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQARHASRF 60 MF P+ G+++L+G EI GL P I + G+ RSFQITNLF GLS+ EN+RL++QARHA+ F Sbjct: 408 MFRPSGGSIRLDGSEIAGLEPHAITRAGIGRSFQITNLFPGLSVEENVRLAVQARHAAHF 467 Query: 61 NMWKDIDSYPEIHAETDELMRFLGLKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLLMD 120 + W+D + EI +T EL+R+ GL GI+ E G+LSYGGQRL+D+G+AL ++P VLL+D Sbjct: 468 SPWRDALAVREIADDTAELLRWTGLSGIERAEAGSLSYGGQRLLDMGLALATRPRVLLLD 527 Query: 121 EPLAGLAAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSGTPDQ 180 EPLAGLAAAERERV L+K ++ +IPVL+VEHDIDRV + +VTVM G+VL+ G+ Sbjct: 528 EPLAGLAAAERERVGDLIKALSADIPVLLVEHDIDRVFRLADRVTVMADGAVLVDGSVAD 587 Query: 181 ARADQRVQEIYTGTGTPPVTGRNRCSAAH 209 AR D RVQ +Y G+GT + + R SAA Sbjct: 588 ARDDDRVQAVYLGSGTAAIAAKPRASAAE 616 Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 12/186 (6%) Query: 4 PNHGTVKLNGKEIQGLTPGQICQRGLARSFQITNLFKGLSIYENLRLSLQARHASRFNMW 63 P G + L GK+I GL+P +I + G+ Q LF G+++ ENL L R Sbjct: 672 PAAGRIVLGGKDIAGLSPDRIARLGIGYVPQGRALFAGMTVAENLGLGRLRRLTG----- 726 Query: 64 KDIDSYPEIHAETDELMRFLG-LKGIDEIEGGALSYGGQRLVDLGIALGSKPHVLLMDEP 122 IH + ++++ F LK ++ LS G Q++V + AL +LL+DEP Sbjct: 727 ------AGIHWDEEKVLEFFPRLKERWTVDAARLSGGEQQMVAVARALSGDTRLLLLDEP 780 Query: 123 LAGLAAAERERVSRLVKIIAGNIPVLIVEHDIDRVLGFSQQVTVMNQGSVLMSGTPDQAR 182 GL+ A E + + I +++V+H +D L S + + +GSV +G R Sbjct: 781 FEGLSPAVTEELFEAFDRLRREIAIILVDHHLDLALALSDRTVALERGSVQWTGASRLLR 840 Query: 183 ADQRVQ 188 DQ ++ Sbjct: 841 EDQELR 846