BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0012.p (294 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001415345.1| extracellular ligand-binding receptor [Xanth... 330 2e-88 ref|YP_999414.1| extracellular ligand-binding receptor [Verminep... 321 7e-86 ref|YP_002498908.1| extracellular ligand-binding receptor [Methy... 316 2e-84 ref|YP_001771419.1| extracellular ligand-binding receptor [Methy... 316 3e-84 ref|YP_001755568.1| extracellular ligand-binding receptor [Methy... 288 5e-76 >ref|YP_001415345.1| extracellular ligand-binding receptor [Xanthobacter autotrophicus Py2] gb|ABS65688.1| Extracellular ligand-binding receptor [Xanthobacter autotrophicus Py2] Length = 445 Score = 330 bits (845), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 150/216 (69%), Positives = 175/216 (81%) Query: 78 IQANGGTIANDELVPTDATDFSPYLLKIRQAKPDLVISNLAGNQITNFIKQYSEFGLPFP 137 I ANGG + DELVPTDATDFSPYLLKIRQ +PD+VISNLAGNQITNFIKQYSEFGL +P Sbjct: 228 IAANGGEVVADELVPTDATDFSPYLLKIRQVRPDVVISNLAGNQITNFIKQYSEFGLKYP 287 Query: 138 IAGFGFDTAVAWGAGADSFAGTWPTTWHHDVNAPSAKAFVAAFTKKFGKPPENQAWGEYV 197 GFGFDTAVAWGAG +F G WP WHHDV +KAFVAAF KKFGKPPENQAWG+YV Sbjct: 288 FGGFGFDTAVAWGAGKGTFGGLWPLIWHHDVPTADSKAFVAAFVKKFGKPPENQAWGDYV 347 Query: 198 AFRSIVQAITETKTLDTAKLIDYFEKGAQVDVLKARKGVYRAWDHQLLQEMYTVTPKPKA 257 A + + +A+ ETK+ A LI YFEK ++D+LK RKG +RAWDHQL+QEMYTVT +P A Sbjct: 348 ATKVVARAMIETKSTTAADLIGYFEKEPELDILKGRKGYFRAWDHQLIQEMYTVTARPVA 407 Query: 258 QVKDKWDFMLLGSSVPGPNESLEILAPTMQENACTF 293 +VKD+WD M+LG +VPGP +L +APT +ENACTF Sbjct: 408 EVKDQWDLMILGPAVPGPETALSAIAPTPEENACTF 443 >ref|YP_999414.1| extracellular ligand-binding receptor [Verminephrobacter eiseniae EF01-2] gb|ABM60396.1| Extracellular ligand-binding receptor [Verminephrobacter eiseniae EF01-2] Length = 432 Score = 321 bits (823), Expect = 7e-86, Method: Compositional matrix adjust. Identities = 158/216 (73%), Positives = 187/216 (86%) Query: 78 IQANGGTIANDELVPTDATDFSPYLLKIRQAKPDLVISNLAGNQITNFIKQYSEFGLPFP 137 + ANGG+ DELV TDATDFSPYLLKIRQAKPD+V+SNL+GNQITNFIKQY+EFGLP+P Sbjct: 217 VTANGGSFVQDELVATDATDFSPYLLKIRQAKPDVVVSNLSGNQITNFIKQYAEFGLPYP 276 Query: 138 IAGFGFDTAVAWGAGADSFAGTWPTTWHHDVNAPSAKAFVAAFTKKFGKPPENQAWGEYV 197 IAGF DTA+AWGAGAD+FAG WP TWHH+V AP+A+AFVAAF KK+G+PPENQAWGEYV Sbjct: 277 IAGFALDTALAWGAGADNFAGIWPLTWHHEVPAPAAQAFVAAFVKKYGRPPENQAWGEYV 336 Query: 198 AFRSIVQAITETKTLDTAKLIDYFEKGAQVDVLKARKGVYRAWDHQLLQEMYTVTPKPKA 257 A +++VQA+ ETK D AK+I+YFEKGA ++VLKARKG +RAWDHQLLQEMYTV PKPK Sbjct: 337 ALKAMVQAMAETKGTDPAKMIEYFEKGAPIEVLKARKGSFRAWDHQLLQEMYTVRPKPKT 396 Query: 258 QVKDKWDFMLLGSSVPGPNESLEILAPTMQENACTF 293 QVKDKW FM + ++VP + +LE LAPT +ENACT Sbjct: 397 QVKDKWGFMAVDAAVPAASAALETLAPTREENACTL 432 >ref|YP_002498908.1| extracellular ligand-binding receptor [Methylobacterium nodulans ORS 2060] gb|ACL58605.1| Extracellular ligand-binding receptor [Methylobacterium nodulans ORS 2060] Length = 415 Score = 316 bits (810), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 146/214 (68%), Positives = 171/214 (79%) Query: 78 IQANGGTIANDELVPTDATDFSPYLLKIRQAKPDLVISNLAGNQITNFIKQYSEFGLPFP 137 ++ANGGT A DELVPTDATDFS YL+KIRQAKPDLVISNLAGNQITNF+KQY+E+GLPFP Sbjct: 198 MEANGGTFAADELVPTDATDFSAYLIKIRQAKPDLVISNLAGNQITNFLKQYAEYGLPFP 257 Query: 138 IAGFGFDTAVAWGAGADSFAGTWPTTWHHDVNAPSAKAFVAAFTKKFGKPPENQAWGEYV 197 IAGFGFDTA+AWGAG SFAGTWP WHH V+ PSAKAFVAAFTKK GKPPENQAWG+Y Sbjct: 258 IAGFGFDTALAWGAGPGSFAGTWPCLWHHKVDTPSAKAFVAAFTKKTGKPPENQAWGDYN 317 Query: 198 AFRSIVQAITETKTLDTAKLIDYFEKGAQVDVLKARKGVYRAWDHQLLQEMYTVTPKPKA 257 R + QAI ETK+++ L+ Y E GA+ DVLK R G +RA DHQL+ EM+ +T P Sbjct: 318 GIRIVAQAIRETKSMEGPALVSYLESGAKFDVLKPRPGYFRARDHQLISEMFAITALPAD 377 Query: 258 QVKDKWDFMLLGSSVPGPNESLEILAPTMQENAC 291 +VKDKWD ++PGP E +E+LAPT +E AC Sbjct: 378 KVKDKWDIFTSSPALPGPQEDMEVLAPTAEEAAC 411 >ref|YP_001771419.1| extracellular ligand-binding receptor [Methylobacterium sp. 4-46] gb|ACA18985.1| Extracellular ligand-binding receptor [Methylobacterium sp. 4-46] Length = 415 Score = 316 bits (809), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 146/214 (68%), Positives = 170/214 (79%) Query: 78 IQANGGTIANDELVPTDATDFSPYLLKIRQAKPDLVISNLAGNQITNFIKQYSEFGLPFP 137 +Q NGG+ A DELVPTDATDFS YL+KIRQAKPDLVISNLAGNQITNF+KQY+E+GLPFP Sbjct: 198 MQGNGGSFAADELVPTDATDFSAYLIKIRQAKPDLVISNLAGNQITNFLKQYAEYGLPFP 257 Query: 138 IAGFGFDTAVAWGAGADSFAGTWPTTWHHDVNAPSAKAFVAAFTKKFGKPPENQAWGEYV 197 IAGFGFDTA+AWGAGA +FAGTWP WHH V+ PSAKAFVAAFTKK+GKPPENQAWG+Y Sbjct: 258 IAGFGFDTALAWGAGAGNFAGTWPCLWHHKVDTPSAKAFVAAFTKKYGKPPENQAWGDYN 317 Query: 198 AFRSIVQAITETKTLDTAKLIDYFEKGAQVDVLKARKGVYRAWDHQLLQEMYTVTPKPKA 257 R + QAI E K+ + L+ Y E GA+ DV K R G +RA DHQL+ EMY +T P Sbjct: 318 GIRIVAQAIREAKSTEGPALVSYLEGGAKFDVQKPRPGYFRARDHQLISEMYAITALPAD 377 Query: 258 QVKDKWDFMLLGSSVPGPNESLEILAPTMQENAC 291 +VKDKWD ++PGPNE LE+LAPT +E AC Sbjct: 378 KVKDKWDIFSSSPALPGPNEDLEVLAPTAEEAAC 411 >ref|YP_001755568.1| extracellular ligand-binding receptor [Methylobacterium radiotolerans JCM 2831] gb|ACB24885.1| Extracellular ligand-binding receptor [Methylobacterium radiotolerans JCM 2831] Length = 419 Score = 288 bits (738), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 126/218 (57%), Positives = 165/218 (75%) Query: 76 KAIQANGGTIANDELVPTDATDFSPYLLKIRQAKPDLVISNLAGNQITNFIKQYSEFGLP 135 K AN T+ ++L+PT+ TDFSP+LLK+RQAKPDLVI NLAG QITNF+KQYSEFGLP Sbjct: 200 KYFAANDATLVGEDLIPTELTDFSPFLLKLRQAKPDLVICNLAGAQITNFLKQYSEFGLP 259 Query: 136 FPIAGFGFDTAVAWGAGADSFAGTWPTTWHHDVNAPSAKAFVAAFTKKFGKPPENQAWGE 195 FP+AGFGFDTA+AWGAG +F GTWP WHH +++PSAK FVAAF K+ KPPENQ WG+ Sbjct: 260 FPVAGFGFDTALAWGAGPGNFLGTWPVIWHHQIDSPSAKKFVAAFKAKYKKPPENQGWGD 319 Query: 196 YVAFRSIVQAITETKTLDTAKLIDYFEKGAQVDVLKARKGVYRAWDHQLLQEMYTVTPKP 255 Y A + + Q++ E K+ ++ K++++ E GA+ D+ K R+G +R WDH+L+QEM+ +T P Sbjct: 320 YTAMKIVAQSMNELKSTESIKVVEHLESGAKFDIAKVREGYFRPWDHELMQEMFAITALP 379 Query: 256 KAQVKDKWDFMLLGSSVPGPNESLEILAPTMQENACTF 293 QVK+ +D +PGP ESLE+LA T ENACTF Sbjct: 380 ADQVKNPFDIFTSTGPLPGPGESLEVLATTRDENACTF 417