BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0030.0005.p (336 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776712.1| ABC transporter periplasmic protein [Herbasp... 572 e-161 ref|YP_004415981.1| hypothetical protein PT7_0817 [Pusillimonas ... 519 e-145 ref|YP_004754196.1| hypothetical protein CFU_3549 [Collimonas fu... 510 e-142 ref|YP_004714091.1| hypothetical protein PSTAB_1721 [Pseudomonas... 490 e-136 gb|AEA83745.1| conserved hypothetical protein [Pseudomonas stutz... 489 e-136 >ref|YP_003776712.1| ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64804.1| ABC-type transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 333 Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust. Identities = 277/316 (87%), Positives = 300/316 (94%) Query: 21 FSTPAMALEKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELIEFKSGTDLIKAIVGGQL 80 FS A ALEKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELIEFKSGTDL+KAIVGGQL Sbjct: 18 FSGNAFALEKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELIEFKSGTDLVKAIVGGQL 77 Query: 81 DSGVFGFTNAVAWASKGADLKVVSGAQLGYHAIVAREDAHINKVSDLKGKTLASQAEGST 140 DSGVFGF+NAVAWASKGADLKVV GAQLGYHA+VARED+ INKV+DLKGKTLASQAEGST Sbjct: 78 DSGVFGFSNAVAWASKGADLKVVGGAQLGYHALVAREDSGINKVADLKGKTLASQAEGST 137 Query: 141 ADVVLKGVVFRDAGLKADDVNVLGVSPQVAVQSLVGKRVDAAFLFEPQARIAQLIAPVRQ 200 AD VLKGVV RDAG+KADDVNV+GVSPQVAVQSLVGKRVDAAFLFEPQARIAQLIAPV+Q Sbjct: 138 ADTVLKGVVLRDAGIKADDVNVMGVSPQVAVQSLVGKRVDAAFLFEPQARIAQLIAPVKQ 197 Query: 201 IYEIGEVWPFPCMVVITSGDTLKNRRAAVWKSLDAQRDAIELLKKKPAEAAKLIAGYFIA 260 +YEIGEVWPFPCMVVITSG+TLK +R AVWKSLDAQRDAI LL+KKPAEA+KLIAGYFIA Sbjct: 198 VYEIGEVWPFPCMVVITSGETLKKKREAVWKSLDAQRDAITLLQKKPAEASKLIAGYFIA 257 Query: 261 EPTLKTLKHGEVLREDVIRDAIKSQTFNAKLNEKEQNRMQEIADILQAQGSLKTKDGKPF 320 EPTLKTLKHGE+LREDVIRDAIKSQTF K+++K+Q+RMQEIADILQ+QGSLKT+DGKPF Sbjct: 258 EPTLKTLKHGEMLREDVIRDAIKSQTFTPKISKKDQDRMQEIADILQSQGSLKTRDGKPF 317 Query: 321 EVRSIVDLAWQKDRKL 336 +V SI DL+WQ RKL Sbjct: 318 DVNSITDLSWQNARKL 333 >ref|YP_004415981.1| hypothetical protein PT7_0817 [Pusillimonas sp. T7-7] gb|AEC19357.1| hypothetical protein PT7_0817 [Pusillimonas sp. T7-7] Length = 331 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 252/332 (75%), Positives = 288/332 (86%), Gaps = 3/332 (0%) Query: 5 LKRLLLVASTALAALVFSTPAMALEKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELIE 64 L RLLL LAA ++PA+A +KFKIGYLRVMDDAQA+AAYE G YKK+GLDVEL+E Sbjct: 3 LSRLLL---PVLAAFALASPALAADKFKIGYLRVMDDAQAIAAYEGGFYKKHGLDVELVE 59 Query: 65 FKSGTDLIKAIVGGQLDSGVFGFTNAVAWASKGADLKVVSGAQLGYHAIVAREDAHINKV 124 FKSGTDLIKAIVGGQLD+GV GFTNA +W+SKGADLKVV GAQ G+HAIV R+D+ I V Sbjct: 60 FKSGTDLIKAIVGGQLDTGVLGFTNAASWSSKGADLKVVGGAQHGFHAIVVRDDSGIKDV 119 Query: 125 SDLKGKTLASQAEGSTADVVLKGVVFRDAGLKADDVNVLGVSPQVAVQSLVGKRVDAAFL 184 + LKG TLASQ EGSTAD VLKGVV ++AGLK +D++++GVSPQVAVQSLVGKRVDAAFL Sbjct: 120 AGLKGHTLASQKEGSTADTVLKGVVLKEAGLKPEDLSIMGVSPQVAVQSLVGKRVDAAFL 179 Query: 185 FEPQARIAQLIAPVRQIYEIGEVWPFPCMVVITSGDTLKNRRAAVWKSLDAQRDAIELLK 244 FEPQARIAQL+APV QIYE+GEVWPFPCMVVI SGDT+KNR+ VWKSLDAQR+AIELL Sbjct: 180 FEPQARIAQLVAPVTQIYEVGEVWPFPCMVVIASGDTVKNRKEDVWKSLDAQREAIELLT 239 Query: 245 KKPAEAAKLIAGYFIAEPTLKTLKHGEVLREDVIRDAIKSQTFNAKLNEKEQNRMQEIAD 304 KP E AKLIA YFIAEPTLKTLKHGEV RED+IRDAIKSQTF+ KL +E +RMQEIAD Sbjct: 240 NKPEEGAKLIARYFIAEPTLKTLKHGEVPREDIIRDAIKSQTFSPKLTTQELDRMQEIAD 299 Query: 305 ILQAQGSLKTKDGKPFEVRSIVDLAWQKDRKL 336 I+QAQGSLKT+DG+PF+V I+DL WQ+ RKL Sbjct: 300 IMQAQGSLKTRDGQPFDVSQIIDLEWQEARKL 331 >ref|YP_004754196.1| hypothetical protein CFU_3549 [Collimonas fungivorans Ter331] gb|AEK63373.1| hypothetical protein CFU_3549 [Collimonas fungivorans Ter331] Length = 335 Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust. Identities = 254/332 (76%), Positives = 286/332 (86%), Gaps = 3/332 (0%) Query: 5 LKRLLLVASTALAALVFSTPAMALEKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELIE 64 LKRL ++ + L + A A EKFKIGYLRVMDDAQA+AA+E G YKK+GL+VEL+E Sbjct: 7 LKRLFILPALLL---TLAGHAGAAEKFKIGYLRVMDDAQAIAAFEGGFYKKHGLEVELVE 63 Query: 65 FKSGTDLIKAIVGGQLDSGVFGFTNAVAWASKGADLKVVSGAQLGYHAIVAREDAHINKV 124 FKSGTDLIKAIVGGQLDSGV GFTNA AWASKGADLKVV+GAQ GYHAIV RED+ I V Sbjct: 64 FKSGTDLIKAIVGGQLDSGVLGFTNAAAWASKGADLKVVAGAQHGYHAIVVREDSGIKDV 123 Query: 125 SDLKGKTLASQAEGSTADVVLKGVVFRDAGLKADDVNVLGVSPQVAVQSLVGKRVDAAFL 184 + LKG TLASQAEGSTAD VLKGV ++AGLKADDVN+LGVSPQVAVQSLVGKRVDAAFL Sbjct: 124 AGLKGHTLASQAEGSTADTVLKGVTLKNAGLKADDVNILGVSPQVAVQSLVGKRVDAAFL 183 Query: 185 FEPQARIAQLIAPVRQIYEIGEVWPFPCMVVITSGDTLKNRRAAVWKSLDAQRDAIELLK 244 FEPQA IA+L+APV+QIYE+GEVWPFPCMVVITSG+TL RR AVWKSLDAQR+AIELL+ Sbjct: 184 FEPQASIAKLVAPVKQIYEVGEVWPFPCMVVITSGETLAKRRDAVWKSLDAQREAIELLQ 243 Query: 245 KKPAEAAKLIAGYFIAEPTLKTLKHGEVLREDVIRDAIKSQTFNAKLNEKEQNRMQEIAD 304 K PA A+KLIA YFIA+PTLKTLK GE+ RE VIRDAIKSQTF+A L KE RMQE+A+ Sbjct: 244 KDPAAASKLIASYFIADPTLKTLKQGELPRETVIRDAIKSQTFSAVLTAKELARMQELAN 303 Query: 305 ILQAQGSLKTKDGKPFEVRSIVDLAWQKDRKL 336 ILQ QGSLKT+DGKPF+V +I+DL WQK RKL Sbjct: 304 ILQDQGSLKTRDGKPFDVNAIIDLDWQKSRKL 335 >ref|YP_004714091.1| hypothetical protein PSTAB_1721 [Pseudomonas stutzeri ATCC 17588 = LMG 11199] gb|AEJ05002.1| hypothetical protein PSTAB_1721 [Pseudomonas stutzeri ATCC 17588 = LMG 11199] Length = 329 Score = 490 bits (1262), Expect = e-136, Method: Compositional matrix adjust. Identities = 240/320 (75%), Positives = 275/320 (85%) Query: 17 AALVFSTPAMALEKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELIEFKSGTDLIKAIV 76 A ++ S A A EKFK+GY+RVMDDAQAM A+EAGLYKK+GLDVELIEF SGTDLIKAIV Sbjct: 10 ALVLLSAFAQAQEKFKVGYIRVMDDAQAMVAHEAGLYKKHGLDVELIEFSSGTDLIKAIV 69 Query: 77 GGQLDSGVFGFTNAVAWASKGADLKVVSGAQLGYHAIVAREDAHINKVSDLKGKTLASQA 136 GGQLD+GV GFTNAVAWASKGADLKVV GAQ GYH+I+ RED I V+ LK +TLASQ Sbjct: 70 GGQLDTGVLGFTNAVAWASKGADLKVVGGAQQGYHSILVREDTDIQDVAGLKDRTLASQR 129 Query: 137 EGSTADVVLKGVVFRDAGLKADDVNVLGVSPQVAVQSLVGKRVDAAFLFEPQARIAQLIA 196 EGSTAD VL+GV ++AGLK DVN++GVSP VAVQSLV RVDAAFLFEP RIAQL+A Sbjct: 130 EGSTADAVLRGVTLKNAGLKPSDVNIMGVSPAVAVQSLVSGRVDAAFLFEPYDRIAQLVA 189 Query: 197 PVRQIYEIGEVWPFPCMVVITSGDTLKNRRAAVWKSLDAQRDAIELLKKKPAEAAKLIAG 256 PVRQ+YEIGEVWPFPCMVVITSGDTL R+ AVWKSLDAQRDAIELL K+PAEAAKLIAG Sbjct: 190 PVRQVYEIGEVWPFPCMVVITSGDTLAKRKDAVWKSLDAQRDAIELLDKQPAEAAKLIAG 249 Query: 257 YFIAEPTLKTLKHGEVLREDVIRDAIKSQTFNAKLNEKEQNRMQEIADILQAQGSLKTKD 316 YFIAEPTLKTLK GE+ RE VI +AI +QTF+AKL + + R+QE+ADILQ QGSLKT+D Sbjct: 250 YFIAEPTLKTLKRGELAREVVIEEAIGTQTFSAKLGDDDLARIQELADILQEQGSLKTRD 309 Query: 317 GKPFEVRSIVDLAWQKDRKL 336 GKPF+ R+I+DL+WQ+ R+L Sbjct: 310 GKPFDTRAILDLSWQEAREL 329 >gb|AEA83745.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 329 Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust. Identities = 239/320 (74%), Positives = 275/320 (85%) Query: 17 AALVFSTPAMALEKFKIGYLRVMDDAQAMAAYEAGLYKKYGLDVELIEFKSGTDLIKAIV 76 A ++ S A A EKFK+GY+RVMDDAQAM A+EAGLYKK+GLDVELIEF SGTDLIKAIV Sbjct: 10 ALVLLSAFAQAQEKFKVGYIRVMDDAQAMVAHEAGLYKKHGLDVELIEFSSGTDLIKAIV 69 Query: 77 GGQLDSGVFGFTNAVAWASKGADLKVVSGAQLGYHAIVAREDAHINKVSDLKGKTLASQA 136 GGQLD+GV GFTNAVAWASKGADLKVV GAQ GYH+I+ RED I V+ LK +TLASQ Sbjct: 70 GGQLDTGVLGFTNAVAWASKGADLKVVGGAQQGYHSILVREDTDIQDVAGLKDRTLASQR 129 Query: 137 EGSTADVVLKGVVFRDAGLKADDVNVLGVSPQVAVQSLVGKRVDAAFLFEPQARIAQLIA 196 EGSTAD VL+GV ++AGLK DVN++GVSP VAVQSLV RVDAAFLFEP RIAQL+A Sbjct: 130 EGSTADAVLRGVTLKNAGLKPSDVNIMGVSPAVAVQSLVSGRVDAAFLFEPYDRIAQLVA 189 Query: 197 PVRQIYEIGEVWPFPCMVVITSGDTLKNRRAAVWKSLDAQRDAIELLKKKPAEAAKLIAG 256 PVRQ+YEIGEVWPFPCMVVITSGDTL R+ AVWKSLDAQRDAIELL K+PAEAAKLIAG Sbjct: 190 PVRQVYEIGEVWPFPCMVVITSGDTLAKRKDAVWKSLDAQRDAIELLDKQPAEAAKLIAG 249 Query: 257 YFIAEPTLKTLKHGEVLREDVIRDAIKSQTFNAKLNEKEQNRMQEIADILQAQGSLKTKD 316 YFIAEPTLKTLK GE+ RE VI +AI +QTF+AKL + + R+QE+ADILQ QGSLKT+D Sbjct: 250 YFIAEPTLKTLKRGELAREVVIEEAIGTQTFSAKLGDDDLARIQELADILQEQGSLKTRD 309 Query: 317 GKPFEVRSIVDLAWQKDRKL 336 G+PF+ R+I+DL+WQ+ R+L Sbjct: 310 GEPFDTRAILDLSWQEAREL 329