BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0004.p         (111 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776713.1| ABC transporter ATPase [Herbaspirillum serop...   191   4e-47
ref|YP_004754197.1| putative ABC-transport protein, ATP-binding ...   184   3e-45
ref|YP_004415980.1| putative ABC-transport protein, ATP-binding ...   162   1e-38
ref|YP_001631169.1| putative ABC-transport protein, ATP-binding ...   134   3e-30
ref|YP_786507.1| ABC transporter ATP-binding protein [Bordetella...   133   9e-30

>ref|YP_003776713.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1]
 gb|ADJ64805.1| ABC-type transport system, ATPase component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 257

 Score =  191 bits (484), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 95/111 (85%), Positives = 100/111 (90%), Gaps = 4/111 (3%)

Query: 1   LLLDEPFGALDALTRMTLQDALRTLIRSEVQGKAPTVLLVTHDVDEALFLADRILVFSAR 60
           LLLDEPFGALDALTRMTLQDALR LIR +     PTV+LVTHDVDEALFLADRI VFS R
Sbjct: 151 LLLDEPFGALDALTRMTLQDALRDLIRQQ----GPTVVLVTHDVDEALFLADRIFVFSPR 206

Query: 61  PATVLKEFNLVHHEKTHDLSEFSAIRREILCLLGIHAEQDEFAKTIEGVGI 111
           PA VLKEFNLVHHEKTHDLSEF+AIRR+ILCLLGIHAEQDEFAK IEGVG+
Sbjct: 207 PAKVLKEFNLVHHEKTHDLSEFAAIRRDILCLLGIHAEQDEFAKNIEGVGV 257


>ref|YP_004754197.1| putative ABC-transport protein, ATP-binding component [Collimonas
           fungivorans Ter331]
 gb|AEK63374.1| putative ABC-transport protein, ATP-binding component [Collimonas
           fungivorans Ter331]
          Length = 257

 Score =  184 bits (468), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 93/109 (85%), Positives = 98/109 (89%), Gaps = 4/109 (3%)

Query: 1   LLLDEPFGALDALTRMTLQDALRTLIRSEVQGKAPTVLLVTHDVDEALFLADRILVFSAR 60
           LLLDEPFGALDALTRMTLQD+LR LIR E     PTVLLVTHDVDEALFLADRILVFS R
Sbjct: 151 LLLDEPFGALDALTRMTLQDSLRQLIREE----RPTVLLVTHDVDEALFLADRILVFSPR 206

Query: 61  PATVLKEFNLVHHEKTHDLSEFSAIRREILCLLGIHAEQDEFAKTIEGV 109
           PATVL+EFNL HHEKTHDLSEF+AIRREILCLLGIHAEQD FAK +EG+
Sbjct: 207 PATVLREFNLNHHEKTHDLSEFAAIRREILCLLGIHAEQDAFAKKLEGI 255


>ref|YP_004415980.1| putative ABC-transport protein, ATP-binding component [Pusillimonas
           sp. T7-7]
 gb|AEC19356.1| putative ABC-transport protein, ATP-binding component [Pusillimonas
           sp. T7-7]
          Length = 257

 Score =  162 bits (410), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 83/101 (82%), Positives = 88/101 (87%), Gaps = 4/101 (3%)

Query: 1   LLLDEPFGALDALTRMTLQDALRTLIRSEVQGKAPTVLLVTHDVDEALFLADRILVFSAR 60
           LLLDEPFGALDALTRMTLQDALR LIR       PTVLLVTHDVDEALFLADRILVFS+R
Sbjct: 151 LLLDEPFGALDALTRMTLQDALRQLIRE----AGPTVLLVTHDVDEALFLADRILVFSSR 206

Query: 61  PATVLKEFNLVHHEKTHDLSEFSAIRREILCLLGIHAEQDE 101
           PATVLKEFNL  HEKTHDLSEF+ +RREIL LLGIHA+ +E
Sbjct: 207 PATVLKEFNLTQHEKTHDLSEFAGMRREILGLLGIHAKHEE 247


>ref|YP_001631169.1| putative ABC-transport protein, ATP-binding component [Bordetella
           petrii DSM 12804]
 emb|CAP42901.1| putative ABC-transport protein, ATP-binding component [Bordetella
           petrii]
          Length = 252

 Score =  134 bits (338), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 81/103 (78%), Gaps = 4/103 (3%)

Query: 1   LLLDEPFGALDALTRMTLQDALRTLIRSEVQGKAPTVLLVTHDVDEALFLADRILVFSAR 60
           +L+DEPFGALDALTR++LQD LR LI+ E     P+VLLVTHDVDEALFLADRI+VFS R
Sbjct: 151 MLMDEPFGALDALTRLSLQDVLRQLIQQE----KPSVLLVTHDVDEALFLADRIVVFSPR 206

Query: 61  PATVLKEFNLVHHEKTHDLSEFSAIRREILCLLGIHAEQDEFA 103
           PA VL+EFNL H  KTHDLS+ +  +REIL LLGI   + + A
Sbjct: 207 PARVLREFNLKHRRKTHDLSDLAGEKREILSLLGIQVAEGDVA 249


>ref|YP_786507.1| ABC transporter ATP-binding protein [Bordetella avium 197N]
 emb|CAJ49600.1| ABC-transporter, ATP-binding protein [Bordetella avium 197N]
          Length = 252

 Score =  133 bits (334), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 72/105 (68%), Positives = 79/105 (75%), Gaps = 4/105 (3%)

Query: 1   LLLDEPFGALDALTRMTLQDALRTLIRSEVQGKAPTVLLVTHDVDEALFLADRILVFSAR 60
           LL+DEPFGALDALTR++LQD LR LI  E     PTVLLVTHDVDEALFLADRI+VFS R
Sbjct: 151 LLMDEPFGALDALTRLSLQDVLRQLILEE----KPTVLLVTHDVDEALFLADRIVVFSPR 206

Query: 61  PATVLKEFNLVHHEKTHDLSEFSAIRREILCLLGIHAEQDEFAKT 105
           PA VL+EFNL H  KTHDLS     +REIL LLGI   QD  A+ 
Sbjct: 207 PARVLREFNLAHRSKTHDLSGLVDEKREILRLLGIAVGQDHVAQA 251