BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0030.0003.p         (196 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004415980.1| putative ABC-transport protein, ATP-binding ...   246   2e-63
ref|YP_003776713.1| ABC transporter ATPase [Herbaspirillum serop...   234   5e-60
ref|YP_004754197.1| putative ABC-transport protein, ATP-binding ...   232   3e-59
gb|EFV83627.1| ABC-transporter [Achromobacter xylosoxidans C54]       210   9e-53
gb|EGP43903.1| ABC transporter family protein 55 [Achromobacter ...   209   2e-52

>ref|YP_004415980.1| putative ABC-transport protein, ATP-binding component [Pusillimonas
           sp. T7-7]
 gb|AEC19356.1| putative ABC-transport protein, ATP-binding component [Pusillimonas
           sp. T7-7]
          Length = 257

 Score =  246 bits (627), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 114/147 (77%), Positives = 127/147 (86%)

Query: 24  MKLSFKNIQKSFSGLHVIDDFSRDIEQGELVALVGPSGCGKSTLLHIAAGLETPSSGSIL 83
           MKLSF+NI+K FSGL VI+DFSRDIE GELVALVGPSGCGKSTLLHIAAGLETPS G++L
Sbjct: 1   MKLSFQNIEKEFSGLRVIEDFSRDIESGELVALVGPSGCGKSTLLHIAAGLETPSGGAML 60

Query: 84  ADGQPVTGPHPERTLMFQENALYPWLTLEQNVALALEFQKVDKKSAAAQARAWLAKVNLS 143
           ADG  + GPHPERTLMFQENALYPWLTL QNVALALEFQK+D++ A  QA  WL+KVNL 
Sbjct: 61  ADGASIQGPHPERTLMFQENALYPWLTLAQNVALALEFQKIDRQKALKQASEWLSKVNLK 120

Query: 144 GFEAYYPHQVSGGMRQRAAPSSRSLKH 170
           GFE Y+PHQVSGGMRQRAA +   + H
Sbjct: 121 GFENYFPHQVSGGMRQRAALARAFISH 147


>ref|YP_003776713.1| ABC transporter ATPase [Herbaspirillum seropedicae SmR1]
 gb|ADJ64805.1| ABC-type transport system, ATPase component protein [Herbaspirillum
           seropedicae SmR1]
          Length = 257

 Score =  234 bits (597), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 109/139 (78%), Positives = 118/139 (84%)

Query: 24  MKLSFKNIQKSFSGLHVIDDFSRDIEQGELVALVGPSGCGKSTLLHIAAGLETPSSGSIL 83
           MKLSF N+ K F  LHVI++F+R+I  GELVALVGPSGCGKSTLLH+AAGLE PSSGS+ 
Sbjct: 1   MKLSFNNVAKHFGDLHVIEEFTREIASGELVALVGPSGCGKSTLLHMAAGLEKPSSGSVA 60

Query: 84  ADGQPVTGPHPERTLMFQENALYPWLTLEQNVALALEFQKVDKKSAAAQARAWLAKVNLS 143
            DGQ + GPHPERTLMFQENALYPWLTL+QNVALALEFQ VDKK AA QAR WL  V L 
Sbjct: 61  GDGQTIRGPHPERTLMFQENALYPWLTLQQNVALALEFQSVDKKKAAEQARVWLENVKLK 120

Query: 144 GFEAYYPHQVSGGMRQRAA 162
           GFE YYPHQVSGGMRQRAA
Sbjct: 121 GFEHYYPHQVSGGMRQRAA 139


>ref|YP_004754197.1| putative ABC-transport protein, ATP-binding component [Collimonas
           fungivorans Ter331]
 gb|AEK63374.1| putative ABC-transport protein, ATP-binding component [Collimonas
           fungivorans Ter331]
          Length = 257

 Score =  232 bits (591), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 111/139 (79%), Positives = 121/139 (87%)

Query: 24  MKLSFKNIQKSFSGLHVIDDFSRDIEQGELVALVGPSGCGKSTLLHIAAGLETPSSGSIL 83
           MKLSFK++ K FSGL VI DFSR+IE+GELVALVGPSGCGKSTLLH+AAGL   SSG++L
Sbjct: 1   MKLSFKHVNKQFSGLPVIADFSREIEEGELVALVGPSGCGKSTLLHLAAGLGAASSGAVL 60

Query: 84  ADGQPVTGPHPERTLMFQENALYPWLTLEQNVALALEFQKVDKKSAAAQARAWLAKVNLS 143
           ADGQ + GPHPER LMFQENALYPWLTLE NVALALE QKV K SA  QAR WL+KV+L 
Sbjct: 61  ADGQAIKGPHPERMLMFQENALYPWLTLEANVALALELQKVGKASARQQARDWLSKVSLQ 120

Query: 144 GFEAYYPHQVSGGMRQRAA 162
           GFEAYYPHQVSGGMRQRAA
Sbjct: 121 GFEAYYPHQVSGGMRQRAA 139


>gb|EFV83627.1| ABC-transporter [Achromobacter xylosoxidans C54]
          Length = 256

 Score =  210 bits (535), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 97/139 (69%), Positives = 114/139 (82%)

Query: 24  MKLSFKNIQKSFSGLHVIDDFSRDIEQGELVALVGPSGCGKSTLLHIAAGLETPSSGSIL 83
           M L+F ++ K F  L V+D F+ + + GELVALVGPSGCGKSTLLH+AAGLE P+ G +L
Sbjct: 1   MNLTFDHVHKQFGDLPVVDGFTSEFKTGELVALVGPSGCGKSTLLHLAAGLEKPTQGQVL 60

Query: 84  ADGQPVTGPHPERTLMFQENALYPWLTLEQNVALALEFQKVDKKSAAAQARAWLAKVNLS 143
           ADG+ V+GPHP RTL+FQE+ALYPWLTLE NVALALEFQK  KK A   AR WLA+V+L+
Sbjct: 61  ADGKAVSGPHPSRTLVFQEHALYPWLTLEDNVALALEFQKTPKKRAREAARQWLARVSLA 120

Query: 144 GFEAYYPHQVSGGMRQRAA 162
           GFE YYPHQVSGGMRQRAA
Sbjct: 121 GFEHYYPHQVSGGMRQRAA 139


>gb|EGP43903.1| ABC transporter family protein 55 [Achromobacter xylosoxidans
           AXX-A]
          Length = 256

 Score =  209 bits (532), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 97/139 (69%), Positives = 113/139 (81%)

Query: 24  MKLSFKNIQKSFSGLHVIDDFSRDIEQGELVALVGPSGCGKSTLLHIAAGLETPSSGSIL 83
           M L+F ++ K F  L V+D F+ + + GELVALVGPSGCGKSTLLH+AAGLE P+ G +L
Sbjct: 1   MNLTFDHVHKHFGDLPVVDGFTSEFKTGELVALVGPSGCGKSTLLHLAAGLEKPTQGQVL 60

Query: 84  ADGQPVTGPHPERTLMFQENALYPWLTLEQNVALALEFQKVDKKSAAAQARAWLAKVNLS 143
           ADG+ V GPHP RTL+FQE+ALYPWLTLE NVALALEFQK  KK A   AR WLA+V+L+
Sbjct: 61  ADGKAVAGPHPSRTLVFQEHALYPWLTLEDNVALALEFQKTPKKRAREAARQWLARVSLA 120

Query: 144 GFEAYYPHQVSGGMRQRAA 162
           GFE YYPHQVSGGMRQRAA
Sbjct: 121 GFEHYYPHQVSGGMRQRAA 139