BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0066.p (329 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003774582.1| major facilitator superfamily permease [Herb... 525 e-147 ref|YP_004753404.1| major facilitator family transporter [Collim... 524 e-147 ref|ZP_07264024.1| major facilitator transporter [Pseudomonas sy... 500 e-139 ref|YP_235792.1| major facilitator transporter [Pseudomonas syri... 500 e-139 gb|EGH44263.1| major facilitator transporter [Pseudomonas syring... 497 e-139 >ref|YP_003774582.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ62674.1| permease of the major facilitator superfamily protein [Herbaspirillum seropedicae SmR1] Length = 447 Score = 525 bits (1352), Expect = e-147, Method: Compositional matrix adjust. Identities = 255/323 (78%), Positives = 289/323 (89%) Query: 1 MAFVHNETSFYILRFLLGVAEAGFFPGVVYYFTQWLPNSERGKAMAVFLSGSAIASILSG 60 MAFV +ETSFY +RFLLGVAEAGFFPGVVYYFTQWLPN ERG+AMAVFLSGSAIASILSG Sbjct: 106 MAFVQSETSFYFMRFLLGVAEAGFFPGVVYYFTQWLPNHERGRAMAVFLSGSAIASILSG 165 Query: 61 PISGALLQIEGGGLHXWQWMFIIEGLASVLLCFVVWRRLDSRPQDAAWLSDDERNSLAAI 120 PI+GALL IEGGGLH WQWMFIIEG AS++ C VVW LDS P++A WLS ++R +LAA+ Sbjct: 166 PITGALLLIEGGGLHGWQWMFIIEGGASMVFCVVVWLVLDSTPREAKWLSQEQREALAAV 225 Query: 121 IAHEQRERQASKPVHVSSWSLLKDPQILLFCFIYFAIQLTIYGATFWLPSIIKKMGHFND 180 IA EQ +R A++P HVS+ SLL+DPQI+LFCFIYFAIQLTIYGATFWLP+IIKKMGHFND Sbjct: 226 IAAEQEQRAANRPAHVSALSLLRDPQIVLFCFIYFAIQLTIYGATFWLPTIIKKMGHFND 285 Query: 181 FQVGLFNSIPWIISIVAMYIFASLAARFRHQQAWVAATLIIAAAGMFASTTGGPVFAFVA 240 FQVGLFNSIPWI++I AMY+FA LAAR++ Q WVA TL+I+AAGM S GPV FVA Sbjct: 286 FQVGLFNSIPWIVAIAAMYLFAVLAARYKKPQFWVATTLVISAAGMAISAVAGPVIGFVA 345 Query: 241 ICFAGIGFKAASSLFWPIPQAYLDARIAAAVIALVNSIGNLGGFFAPATFGYLEQKTGSI 300 +CFAGIGFKAASSLFWPIPQAYLDARIAAAV+AL+NS+GNLGGFFAPATFGYLEQKTGSI Sbjct: 346 VCFAGIGFKAASSLFWPIPQAYLDARIAAAVLALINSLGNLGGFFAPATFGYLEQKTGSI 405 Query: 301 QGGLYALAAASVIAAGLVFLART 323 QGGL+AL+ AS++AA LVFLART Sbjct: 406 QGGLFALSGASLLAAVLVFLART 428 >ref|YP_004753404.1| major facilitator family transporter [Collimonas fungivorans Ter331] gb|AEK62581.1| Major facilitator family transporter [Collimonas fungivorans Ter331] Length = 440 Score = 524 bits (1350), Expect = e-147, Method: Compositional matrix adjust. Identities = 259/326 (79%), Positives = 291/326 (89%) Query: 1 MAFVHNETSFYILRFLLGVAEAGFFPGVVYYFTQWLPNSERGKAMAVFLSGSAIASILSG 60 MAF+ ETSFY++R LLGVAEAGFFPGVVYYFTQWLPNSERGKAMA+FLSGSA+AS++SG Sbjct: 115 MAFITGETSFYVMRLLLGVAEAGFFPGVVYYFTQWLPNSERGKAMAIFLSGSALASVISG 174 Query: 61 PISGALLQIEGGGLHXWQWMFIIEGLASVLLCFVVWRRLDSRPQDAAWLSDDERNSLAAI 120 P+SGALLQIEGGG H WQWMFIIEG AS++LC VVW RLDS P+DA WL+D ER +LA + Sbjct: 175 PLSGALLQIEGGGFHGWQWMFIIEGAASIVLCLVVWFRLDSHPRDAKWLTDSERKALAEV 234 Query: 121 IAHEQRERQASKPVHVSSWSLLKDPQILLFCFIYFAIQLTIYGATFWLPSIIKKMGHFND 180 I EQ+ER+A++P HVSS +LLKD +I LFCF+YFAIQLTIYGATFWLPSIIKKMGHF+D Sbjct: 235 IDAEQKEREANRPKHVSSLALLKDGRIALFCFVYFAIQLTIYGATFWLPSIIKKMGHFSD 294 Query: 181 FQVGLFNSIPWIISIVAMYIFASLAARFRHQQAWVAATLIIAAAGMFASTTGGPVFAFVA 240 FQ+GLFNSIPW+ISIVAMYIFASLAARF+HQQ WVA L++AA GMF STT GPVFAFVA Sbjct: 295 FQIGLFNSIPWLISIVAMYIFASLAARFKHQQMWVAIALVVAACGMFMSTTSGPVFAFVA 354 Query: 241 ICFAGIGFKAASSLFWPIPQAYLDARIAAAVIALVNSIGNLGGFFAPATFGYLEQKTGSI 300 ICFA IGFKAASSLFWPIPQ YLDARIAA VIAL+NS+GNLGGF APATFGYLEQKTGSI Sbjct: 355 ICFAAIGFKAASSLFWPIPQGYLDARIAAGVIALINSLGNLGGFVAPATFGYLEQKTGSI 414 Query: 301 QGGLYALAAASVIAAGLVFLARTSGK 326 QGGLY LAAASV+AA LVFL + + Sbjct: 415 QGGLYGLAAASVVAAALVFLTKKRRR 440 >ref|ZP_07264024.1| major facilitator transporter [Pseudomonas syringae pv. syringae 642] Length = 447 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 243/326 (74%), Positives = 282/326 (86%) Query: 1 MAFVHNETSFYILRFLLGVAEAGFFPGVVYYFTQWLPNSERGKAMAVFLSGSAIASILSG 60 MAFV ETSFY+LRF+LG AEAGFFPG++YYFTQWLP+S+RGKAMA+FLSGSAIAS++SG Sbjct: 94 MAFVQGETSFYVLRFILGAAEAGFFPGIIYYFTQWLPSSDRGKAMALFLSGSAIASVISG 153 Query: 61 PISGALLQIEGGGLHXWQWMFIIEGLASVLLCFVVWRRLDSRPQDAAWLSDDERNSLAAI 120 P+SGALL IEG LH WQWMF+IEG AS++LC VW L S P +A WLS++E+N+L+ Sbjct: 154 PVSGALLGIEGLNLHGWQWMFLIEGFASIVLCGFVWFWLQSHPHEARWLSEEEKNALSTA 213 Query: 121 IAHEQRERQASKPVHVSSWSLLKDPQILLFCFIYFAIQLTIYGATFWLPSIIKKMGHFND 180 IA EQR R+AS+ V S LL D QILLFCFIYF++ LTIYGATFWLPS+I+KMG F+D Sbjct: 214 IAEEQRLREASQTVRPSVLRLLADRQILLFCFIYFSVALTIYGATFWLPSMIRKMGSFSD 273 Query: 181 FQVGLFNSIPWIISIVAMYIFASLAARFRHQQAWVAATLIIAAAGMFASTTGGPVFAFVA 240 F+VGLFNSIPWIISIVAMY FA+LAARF+HQQAWVA TL+IAAAGMF ST GGPVFAFVA Sbjct: 274 FEVGLFNSIPWIISIVAMYGFAALAARFKHQQAWVAVTLVIAAAGMFMSTVGGPVFAFVA 333 Query: 241 ICFAGIGFKAASSLFWPIPQAYLDARIAAAVIALVNSIGNLGGFFAPATFGYLEQKTGSI 300 ICFA IGFKAAS+LFWPIPQ YLDARIAAAVIAL+NSIGNLGGF AP TFG+LEQ TGSI Sbjct: 334 ICFAAIGFKAASALFWPIPQGYLDARIAAAVIALINSIGNLGGFVAPTTFGFLEQTTGSI 393 Query: 301 QGGLYALAAASVIAAGLVFLARTSGK 326 QGGLY LAA S++AA ++F ART+ + Sbjct: 394 QGGLYGLAATSLLAAVVIFFARTTPR 419 >ref|YP_235792.1| major facilitator transporter [Pseudomonas syringae pv. syringae B728a] gb|AAY37754.1| Major facilitator superfamily [Pseudomonas syringae pv. syringae B728a] Length = 464 Score = 500 bits (1287), Expect = e-139, Method: Compositional matrix adjust. Identities = 242/326 (74%), Positives = 282/326 (86%) Query: 1 MAFVHNETSFYILRFLLGVAEAGFFPGVVYYFTQWLPNSERGKAMAVFLSGSAIASILSG 60 MAFV ETSFY+LRF+LG AEAGFFPG++YYFTQWLP+S+RGKAMA+FLSGSAIAS++SG Sbjct: 111 MAFVQGETSFYVLRFILGAAEAGFFPGIIYYFTQWLPSSDRGKAMALFLSGSAIASVISG 170 Query: 61 PISGALLQIEGGGLHXWQWMFIIEGLASVLLCFVVWRRLDSRPQDAAWLSDDERNSLAAI 120 P+SGALL +EG LH WQWMF+IEG AS++LC VW L S P +A WLSD+E+ +L+ Sbjct: 171 PVSGALLGLEGMNLHGWQWMFLIEGFASIVLCGFVWFWLQSHPHEARWLSDEEKTALSTA 230 Query: 121 IAHEQRERQASKPVHVSSWSLLKDPQILLFCFIYFAIQLTIYGATFWLPSIIKKMGHFND 180 IA EQR R+AS+ V S + LL D QILLFCFIYF++ LTIYGATFWLPS+I+KMG F+D Sbjct: 231 IAEEQRLREASQTVRPSVFRLLADRQILLFCFIYFSVALTIYGATFWLPSMIRKMGSFSD 290 Query: 181 FQVGLFNSIPWIISIVAMYIFASLAARFRHQQAWVAATLIIAAAGMFASTTGGPVFAFVA 240 F+VGLFNSIPWIISIVAMY FA+LAARF+HQQAWVA TL+IAAAGMF ST GGPVFAFVA Sbjct: 291 FEVGLFNSIPWIISIVAMYGFAALAARFKHQQAWVAVTLVIAAAGMFMSTVGGPVFAFVA 350 Query: 241 ICFAGIGFKAASSLFWPIPQAYLDARIAAAVIALVNSIGNLGGFFAPATFGYLEQKTGSI 300 ICFA IGFKAAS+LFWPIPQ YLDARIAAAVIAL+NSIGNLGGF AP TFG+LEQ TGSI Sbjct: 351 ICFAAIGFKAASALFWPIPQGYLDARIAAAVIALINSIGNLGGFVAPTTFGFLEQTTGSI 410 Query: 301 QGGLYALAAASVIAAGLVFLARTSGK 326 QGGLY LAA S++AA ++F ART+ + Sbjct: 411 QGGLYGLAATSLLAAVVIFFARTTPR 436 >gb|EGH44263.1| major facilitator transporter [Pseudomonas syringae pv. pisi str. 1704B] Length = 447 Score = 497 bits (1280), Expect = e-139, Method: Compositional matrix adjust. Identities = 242/326 (74%), Positives = 281/326 (86%) Query: 1 MAFVHNETSFYILRFLLGVAEAGFFPGVVYYFTQWLPNSERGKAMAVFLSGSAIASILSG 60 MAFV ETSFY+LRF+LG AEAGFFPG++YYFTQWLP+S+RGKAMA+FLSGSAIAS++SG Sbjct: 94 MAFVQGETSFYVLRFILGAAEAGFFPGIIYYFTQWLPSSDRGKAMALFLSGSAIASVISG 153 Query: 61 PISGALLQIEGGGLHXWQWMFIIEGLASVLLCFVVWRRLDSRPQDAAWLSDDERNSLAAI 120 P+SGALL IEG LH WQWMF+IEG AS++LC VW L S P +A WLSD+E+ +L+ Sbjct: 154 PVSGALLGIEGLNLHGWQWMFLIEGFASIVLCGFVWFWLQSHPHEARWLSDEEKTALSTA 213 Query: 121 IAHEQRERQASKPVHVSSWSLLKDPQILLFCFIYFAIQLTIYGATFWLPSIIKKMGHFND 180 IA EQR R+AS+ V S + LL D QILLFCFIYF++ LTIYGATFWLPS+I+KMG F+D Sbjct: 214 IAEEQRLREASQTVRPSVFRLLADRQILLFCFIYFSVALTIYGATFWLPSMIRKMGSFSD 273 Query: 181 FQVGLFNSIPWIISIVAMYIFASLAARFRHQQAWVAATLIIAAAGMFASTTGGPVFAFVA 240 +VGLFNSIPWIISIVAMY FA+LAARF+HQQAWVA TL+IAAAGMF ST GGPVFAFVA Sbjct: 274 LEVGLFNSIPWIISIVAMYGFAALAARFKHQQAWVAVTLVIAAAGMFMSTVGGPVFAFVA 333 Query: 241 ICFAGIGFKAASSLFWPIPQAYLDARIAAAVIALVNSIGNLGGFFAPATFGYLEQKTGSI 300 ICFA IGFKAAS+LFWPIPQ YLDARIAAAVIAL+NSIGNLGGF AP TFG+LEQ TGSI Sbjct: 334 ICFAAIGFKAASALFWPIPQGYLDARIAAAVIALINSIGNLGGFVAPTTFGFLEQTTGSI 393 Query: 301 QGGLYALAAASVIAAGLVFLARTSGK 326 QGGLY LAA S++AA ++F ART+ + Sbjct: 394 QGGLYGLAATSLLAAVVIFFARTTPR 419