BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0065.p         (112 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774568.1| major facilitator superfamily transporter pr...   123   7e-27
ref|ZP_08138281.1| major facilitator transporter [Pseudomonas sp...   122   2e-26
ref|YP_001670989.1| major facilitator transporter [Pseudomonas p...   122   2e-26
ref|YP_001269936.1| major facilitator transporter [Pseudomonas p...   121   3e-26
ref|YP_001887855.1| major facilitator superfamily protein [Burkh...   120   5e-26

>ref|YP_003774568.1| major facilitator superfamily transporter protein [Herbaspirillum
          seropedicae SmR1]
 gb|ADJ62660.1| major facilitator superfamily transporter protein [Herbaspirillum
          seropedicae SmR1]
          Length = 449

 Score =  123 bits (309), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 57/72 (79%), Positives = 66/72 (91%)

Query: 21 LASAIDKVKWRILPLFVIMFIANYIDRVNIGFVRSHLATDLGIGTAAFGFGAGLFFIGYA 80
          L  A+ K+K R+LPLFVIMFI NYIDRVNIGFVRSHLATD+GIGTAA+G GAGLFF+GYA
Sbjct: 26 LQQAVAKIKQRVLPLFVIMFIVNYIDRVNIGFVRSHLATDVGIGTAAYGLGAGLFFVGYA 85

Query: 81 IFEVPSNMLLQK 92
          +FEVPSN+LLQ+
Sbjct: 86 LFEVPSNLLLQR 97


>ref|ZP_08138281.1| major facilitator transporter [Pseudomonas sp. TJI-51]
 gb|EGC00441.1| major facilitator transporter [Pseudomonas sp. TJI-51]
          Length = 450

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 61/81 (75%), Positives = 67/81 (82%), Gaps = 1/81 (1%)

Query: 13 PDGKASG-PLASAIDKVKWRILPLFVIMFIANYIDRVNIGFVRSHLATDLGIGTAAFGFG 71
          P  +  G  LASA+ KVK  +LPLFVIMFI NY+DRVNIGFVR HL +DLGI  AAFGFG
Sbjct: 7  PSARNEGDALASAVAKVKRHVLPLFVIMFIVNYLDRVNIGFVRPHLESDLGISAAAFGFG 66

Query: 72 AGLFFIGYAIFEVPSNMLLQK 92
          AGLFFIGYA+FEVPSNMLLQK
Sbjct: 67 AGLFFIGYALFEVPSNMLLQK 87


>ref|YP_001670989.1| major facilitator transporter [Pseudomonas putida GB-1]
 gb|ABZ00654.1| major facilitator superfamily MFS_1 [Pseudomonas putida GB-1]
          Length = 450

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 63/83 (75%), Positives = 69/83 (83%), Gaps = 3/83 (3%)

Query: 10 AAHPDGKASGPLASAIDKVKWRILPLFVIMFIANYIDRVNIGFVRSHLATDLGIGTAAFG 69
          +A  DG A   LASA+ KVK  +LPLFVIMFI NY+DRVNIGFVR HL +DLGI  AAFG
Sbjct: 8  SARHDGDA---LASAVAKVKRHVLPLFVIMFIVNYLDRVNIGFVRPHLESDLGISAAAFG 64

Query: 70 FGAGLFFIGYAIFEVPSNMLLQK 92
          FGAGLFFIGYA+FEVPSNMLLQK
Sbjct: 65 FGAGLFFIGYALFEVPSNMLLQK 87


>ref|YP_001269936.1| major facilitator transporter [Pseudomonas putida F1]
 gb|ABQ80752.1| major facilitator superfamily MFS_1 [Pseudomonas putida F1]
          Length = 450

 Score =  121 bits (304), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 61/81 (75%), Positives = 67/81 (82%), Gaps = 1/81 (1%)

Query: 13 PDGKASG-PLASAIDKVKWRILPLFVIMFIANYIDRVNIGFVRSHLATDLGIGTAAFGFG 71
          P  +  G  LASA+ KVK  +LPLFVIMFI NY+DRVNIGFVR HL +DLGI  AAFGFG
Sbjct: 7  PSARHEGDALASAVAKVKRHVLPLFVIMFIVNYLDRVNIGFVRPHLESDLGISAAAFGFG 66

Query: 72 AGLFFIGYAIFEVPSNMLLQK 92
          AGLFFIGYA+FEVPSNMLLQK
Sbjct: 67 AGLFFIGYALFEVPSNMLLQK 87


>ref|YP_001887855.1| major facilitator superfamily protein [Burkholderia phytofirmans
          PsJN]
 gb|ACD18485.1| major facilitator superfamily MFS_1 [Burkholderia phytofirmans
          PsJN]
          Length = 443

 Score =  120 bits (302), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 57/77 (74%), Positives = 67/77 (87%)

Query: 16 KASGPLASAIDKVKWRILPLFVIMFIANYIDRVNIGFVRSHLATDLGIGTAAFGFGAGLF 75
           A+ PL SA+ KVK  +LPLF+IMFIANYIDRVNIGFV SH+ TDLGIG AA+G G+GLF
Sbjct: 7  TAADPLESAVSKVKRHVLPLFLIMFIANYIDRVNIGFVNSHMQTDLGIGAAAYGLGSGLF 66

Query: 76 FIGYAIFEVPSNMLLQK 92
          FIGYA+FEVPSN+L+QK
Sbjct: 67 FIGYALFEVPSNVLMQK 83