BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0064.p (497 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004751403.1| glucarate dehydratase [Collimonas fungivoran... 756 0.0 ref|YP_002873806.1| glucarate dehydratase [Pseudomonas fluoresce... 747 0.0 ref|YP_004353126.1| glucarate dehydratase [Pseudomonas brassicac... 747 0.0 emb|CBA33961.1| Glucarate dehydratase [Curvibacter putative symb... 747 0.0 ref|YP_349450.1| D-glucarate dehydratase [Pseudomonas fluorescen... 747 0.0 >ref|YP_004751403.1| glucarate dehydratase [Collimonas fungivorans Ter331] gb|AEK60580.1| Glucarate dehydratase [Collimonas fungivorans Ter331] Length = 475 Score = 756 bits (1953), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/462 (81%), Positives = 408/462 (88%), Gaps = 5/462 (1%) Query: 38 IMSNASNTSTLSNSSGS--SAPVVTAMQVIPVAGRDGMLLNLSGAHGPYFTRNIVILTDS 95 I S+ T SN+S + P + M+V+PVAGRD MLLNLSGAHGPYFTRNIVIL DS Sbjct: 17 IYSHRQPVMTDSNTSPAVPGTPHIVDMRVVPVAGRDSMLLNLSGAHGPYFTRNIVILRDS 76 Query: 96 AGNTGVGEVPGGERIRQTLEDARELVVGQSIANYNAVLNRMRRTFSDRDAGGRXGRGLQT 155 AGNTGVGEVPGGERIRQTLEDAR L++G+SI +Y A+LN R F DRDAGGR GLQT Sbjct: 77 AGNTGVGEVPGGERIRQTLEDARPLLLGKSIGSYQAILNSARTAFGDRDAGGR---GLQT 133 Query: 156 FDLRITIHAVTAVEAALLDLLGKFLGVPVAALLGEGQQRDKVEMLGYLFYVGDRNATDLD 215 FDLRI IHAVTA+EAALLDLLGKFLGVPVAALLGEGQQRD V+MLGYLFYVGDRNATDL Sbjct: 134 FDLRIAIHAVTALEAALLDLLGKFLGVPVAALLGEGQQRDAVKMLGYLFYVGDRNATDLP 193 Query: 216 YHSEPDNADDWQRLRHEKAMDAEAIVRLAEAAYRRYGFNDFKLKGGVLRGEDEIEAIAAL 275 Y S PD ADDW RLRHE A+DA+A+V LAEAAY+RYGFNDFKLKGGVLRGEDEIEA+ AL Sbjct: 194 YASAPDAADDWLRLRHEPALDAQAVVALAEAAYQRYGFNDFKLKGGVLRGEDEIEAVTAL 253 Query: 276 HERFPQARITLDPNGGWLLKDAIRLCRDQHGVLAYAEDPCGAENGYSGREVMAEFRRATG 335 ERFP ARITLDPNGGWLLKDAIRLCRDQH VLAYAEDPCGAENG+SGREVMAEFRRATG Sbjct: 254 AERFPAARITLDPNGGWLLKDAIRLCRDQHAVLAYAEDPCGAENGFSGREVMAEFRRATG 313 Query: 336 LQTATNMIATDWREMGHTIRLQSVDIPLADPHFWTMQGSIRVAQLCNEWGLTWGSHSNNH 395 LQTATNMIATDWREMGH I+LQSVDIPLADPHFWTMQGS+RVAQ+C EWGLTWGSHSNNH Sbjct: 314 LQTATNMIATDWREMGHAIQLQSVDIPLADPHFWTMQGSVRVAQMCREWGLTWGSHSNNH 373 Query: 396 FDISLAMFTQVAAAAPGKITAIDTHWIWQDGQRLTREPFRIVGGMVDVPAAPGLGVEIDM 455 FDISLAMFT VAAAAPG ITAIDTHWIWQDGQRLT+EP RI GGMV+VP PGLG+E+D+ Sbjct: 374 FDISLAMFTHVAAAAPGDITAIDTHWIWQDGQRLTKEPLRIAGGMVEVPKKPGLGIELDL 433 Query: 456 EQVLAANALYKAKGLGARDDAIAMQYLIPGWKFDNKKPCLVR 497 ++ AA+ LY+ GLGARDDA+AMQYLIPGWKFDNKKPCL+R Sbjct: 434 AELEAAHQLYRGMGLGARDDAVAMQYLIPGWKFDNKKPCLLR 475 >ref|YP_002873806.1| glucarate dehydratase [Pseudomonas fluorescens SBW25] emb|CAY50823.1| glucarate dehydratase [Pseudomonas fluorescens SBW25] Length = 441 Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/443 (80%), Positives = 393/443 (88%), Gaps = 3/443 (0%) Query: 55 SAPVVTAMQVIPVAGRDGMLLNLSGAHGPYFTRNIVILTDSAGNTGVGEVPGGERIRQTL 114 + PVVT QVIPVAG D MLLNLSGAHGPYFTRNIVIL DS+GNTGVGEVPGGERIR+TL Sbjct: 2 NTPVVTHFQVIPVAGHDSMLLNLSGAHGPYFTRNIVILKDSSGNTGVGEVPGGERIRETL 61 Query: 115 EDARELVVGQSIANYNAVLNRMRRTFSDRDAGGRXGRGLQTFDLRITIHAVTAVEAALLD 174 EDAR LVVGQ I Y VLN+MR TF+ RDA GR GLQTFDLRITIHAVTAVEAALLD Sbjct: 62 EDARSLVVGQPIGQYQRVLNQMRSTFASRDAAGR---GLQTFDLRITIHAVTAVEAALLD 118 Query: 175 LLGKFLGVPVAALLGEGQQRDKVEMLGYLFYVGDRNATDLDYHSEPDNADDWQRLRHEKA 234 LLG+FL VPVAALLGEGQQRD V+MLGYLFYVGDRNATDL Y +E D+ D+W RLRHEKA Sbjct: 119 LLGQFLEVPVAALLGEGQQRDAVKMLGYLFYVGDRNATDLAYRNEADSDDEWFRLRHEKA 178 Query: 235 MDAEAIVRLAEAAYRRYGFNDFKLKGGVLRGEDEIEAIAALHERFPQARITLDPNGGWLL 294 + ++A+VRLAEAA +YGFNDFKLKGGVL G+ EIEA+ AL ERFP ARITLDPNG W L Sbjct: 179 LTSDAVVRLAEAAQAKYGFNDFKLKGGVLSGDAEIEAVTALAERFPDARITLDPNGAWSL 238 Query: 295 KDAIRLCRDQHGVLAYAEDPCGAENGYSGREVMAEFRRATGLQTATNMIATDWREMGHTI 354 K+AIRLCRDQH VLAYAEDPCGAENGYSGREVMAEFRRATGL+TATNMIATDWREMGH I Sbjct: 239 KEAIRLCRDQHHVLAYAEDPCGAENGYSGREVMAEFRRATGLKTATNMIATDWREMGHAI 298 Query: 355 RLQSVDIPLADPHFWTMQGSIRVAQLCNEWGLTWGSHSNNHFDISLAMFTQVAAAAPGKI 414 +LQSVDIPLADPHFWT+QGS+RVAQ+CN+WGLTWGSHSNNHFDISLAMFTQVAAAAPG I Sbjct: 299 QLQSVDIPLADPHFWTLQGSVRVAQMCNDWGLTWGSHSNNHFDISLAMFTQVAAAAPGDI 358 Query: 415 TAIDTHWIWQDGQRLTREPFRIVGGMVDVPAAPGLGVEIDMEQVLAANALYKAKGLGARD 474 TAIDTHWIWQDGQRLT+ P +I GG V VP+ PGLGVEIDM+ V A+ +YK GLGARD Sbjct: 359 TAIDTHWIWQDGQRLTKAPLKIEGGYVKVPSKPGLGVEIDMDAVAKAHEVYKGMGLGARD 418 Query: 475 DAIAMQYLIPGWKFDNKKPCLVR 497 D++AMQ+LIPGW+F+NK+PCLVR Sbjct: 419 DSVAMQFLIPGWRFNNKQPCLVR 441 >ref|YP_004353126.1| glucarate dehydratase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA68122.1| glucarate dehydratase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 447 Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/450 (78%), Positives = 395/450 (87%), Gaps = 3/450 (0%) Query: 48 LSNSSGSSAPVVTAMQVIPVAGRDGMLLNLSGAHGPYFTRNIVILTDSAGNTGVGEVPGG 107 +S S AP++T+MQ++PVAG DGMLLNLSGAHGP+FTRNIVIL D+AG+TGVGEVPGG Sbjct: 1 MSTPETSKAPIITSMQIVPVAGHDGMLLNLSGAHGPFFTRNIVILKDNAGHTGVGEVPGG 60 Query: 108 ERIRQTLEDARELVVGQSIANYNAVLNRMRRTFSDRDAGGRXGRGLQTFDLRITIHAVTA 167 ERIRQTLEDAR LVVG I Y +LN +R+ F+DRDAGGR GLQTFDLRITIHAVT Sbjct: 61 ERIRQTLEDARSLVVGSPIGTYQKILNTVRQAFADRDAGGR---GLQTFDLRITIHAVTG 117 Query: 168 VEAALLDLLGKFLGVPVAALLGEGQQRDKVEMLGYLFYVGDRNATDLDYHSEPDNADDWQ 227 +EAALLDLLG+ L VPVAALLGEGQQRD+V+MLGYLFYVGDR TDL Y SEPD +DW Sbjct: 118 LEAALLDLLGQHLDVPVAALLGEGQQRDEVKMLGYLFYVGDRQQTDLPYRSEPDADNDWF 177 Query: 228 RLRHEKAMDAEAIVRLAEAAYRRYGFNDFKLKGGVLRGEDEIEAIAALHERFPQARITLD 287 R+RHEKA+DA+A+VRLAEAA+ RYGF DFKLKGGVL+G+ EIEA+ AL ERFPQARITLD Sbjct: 178 RVRHEKALDADAVVRLAEAAHARYGFQDFKLKGGVLQGDAEIEAVTALAERFPQARITLD 237 Query: 288 PNGGWLLKDAIRLCRDQHGVLAYAEDPCGAENGYSGREVMAEFRRATGLQTATNMIATDW 347 PNG W LK+AIRLCRDQH VLAYAEDPCGAENGYSGREVMAEFRRATGL+TATNMIATDW Sbjct: 238 PNGAWSLKEAIRLCRDQHKVLAYAEDPCGAENGYSGREVMAEFRRATGLKTATNMIATDW 297 Query: 348 REMGHTIRLQSVDIPLADPHFWTMQGSIRVAQLCNEWGLTWGSHSNNHFDISLAMFTQVA 407 REMGH I LQSVDIPLADPHFWTMQGS+RVAQ+CNEWGLTWGSHSNNHFDISLAMFT VA Sbjct: 298 REMGHAITLQSVDIPLADPHFWTMQGSVRVAQMCNEWGLTWGSHSNNHFDISLAMFTHVA 357 Query: 408 AAAPGKITAIDTHWIWQDGQRLTREPFRIVGGMVDVPAAPGLGVEIDMEQVLAANALYKA 467 AAAPG ITAIDTHWIWQDGQRLT+ P +I GG V VP PGLG+E+D +Q+ A+ LYK Sbjct: 358 AAAPGDITAIDTHWIWQDGQRLTKAPLQIQGGCVQVPKKPGLGIELDTDQLAKAHELYKG 417 Query: 468 KGLGARDDAIAMQYLIPGWKFDNKKPCLVR 497 GLGARDDA+AMQ+LIPGW F+NK+PCLVR Sbjct: 418 MGLGARDDAVAMQFLIPGWTFNNKRPCLVR 447 >emb|CBA33961.1| Glucarate dehydratase [Curvibacter putative symbiont of Hydra magnipapillata] Length = 452 Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/442 (79%), Positives = 392/442 (88%), Gaps = 3/442 (0%) Query: 56 APVVTAMQVIPVAGRDGMLLNLSGAHGPYFTRNIVILTDSAGNTGVGEVPGGERIRQTLE 115 APVVTA++VIPVAG DGML+NLSGAH P+FTRNIVILTDS+GNTGVGEVPGGE+IRQTLE Sbjct: 14 APVVTALRVIPVAGHDGMLMNLSGAHAPFFTRNIVILTDSSGNTGVGEVPGGEKIRQTLE 73 Query: 116 DARELVVGQSIANYNAVLNRMRRTFSDRDAGGRXGRGLQTFDLRITIHAVTAVEAALLDL 175 DA LVVGQSI NYNA+LNRMR F+ RD+ GRGLQTFDLR+ IHAVTAVE+ALLDL Sbjct: 74 DAASLVVGQSIGNYNAILNRMREAFAARDS---EGRGLQTFDLRVAIHAVTAVESALLDL 130 Query: 176 LGKFLGVPVAALLGEGQQRDKVEMLGYLFYVGDRNATDLDYHSEPDNADDWQRLRHEKAM 235 LGKFLGVPVAALLG+GQQR V +LGYLFYVGDR TDL Y SEPD ADDW+RLRHEKAM Sbjct: 131 LGKFLGVPVAALLGDGQQRSSVAVLGYLFYVGDRQQTDLPYISEPDQADDWKRLRHEKAM 190 Query: 236 DAEAIVRLAEAAYRRYGFNDFKLKGGVLRGEDEIEAIAALHERFPQARITLDPNGGWLLK 295 DA+ +VRLAEAA+ RYGF DFKLKGGVLRGE+E+EAI ALH RFPQARITLDPNGGWLL Sbjct: 191 DADGVVRLAEAAFARYGFQDFKLKGGVLRGEEEVEAIRALHARFPQARITLDPNGGWLLN 250 Query: 296 DAIRLCRDQHGVLAYAEDPCGAENGYSGREVMAEFRRATGLQTATNMIATDWREMGHTIR 355 DA+RLCRD HGV+AYAEDPCGAE +SGREV+AEFRRATGL TATNMIATDWRE+ H++ Sbjct: 251 DAVRLCRDLHGVMAYAEDPCGAEGVFSGREVVAEFRRATGLPTATNMIATDWRELAHSLA 310 Query: 356 LQSVDIPLADPHFWTMQGSIRVAQLCNEWGLTWGSHSNNHFDISLAMFTQVAAAAPGKIT 415 LQSVDIPLADPHFWTMQGS+RVAQ+C WGLTWGSHSNNHFD+SLAMFT VAAAAPGK+T Sbjct: 311 LQSVDIPLADPHFWTMQGSVRVAQVCQTWGLTWGSHSNNHFDVSLAMFTHVAAAAPGKVT 370 Query: 416 AIDTHWIWQDGQRLTREPFRIVGGMVDVPAAPGLGVEIDMEQVLAANALYKAKGLGARDD 475 AIDTHWIWQDGQRLT +P +IVGG + VP PGLGVE+DM +V A+ LY GLGAR+D Sbjct: 371 AIDTHWIWQDGQRLTTDPLQIVGGQITVPTTPGLGVELDMVEVEKAHQLYLQHGLGARND 430 Query: 476 AIAMQYLIPGWKFDNKKPCLVR 497 A+AMQYLIPGWKFD K+PCLVR Sbjct: 431 AMAMQYLIPGWKFDPKRPCLVR 452 >ref|YP_349450.1| D-glucarate dehydratase [Pseudomonas fluorescens Pf0-1] gb|ABA75459.1| glucarate dehydratase [Pseudomonas fluorescens Pf0-1] Length = 447 Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/444 (80%), Positives = 393/444 (88%), Gaps = 3/444 (0%) Query: 54 SSAPVVTAMQVIPVAGRDGMLLNLSGAHGPYFTRNIVILTDSAGNTGVGEVPGGERIRQT 113 + AP++T MQVIPVAG DGMLLNLSGAHGP+FTRNIVIL D+AG+TGVGEVPGGERIRQT Sbjct: 7 AKAPIITEMQVIPVAGHDGMLLNLSGAHGPFFTRNIVILKDNAGHTGVGEVPGGERIRQT 66 Query: 114 LEDARELVVGQSIANYNAVLNRMRRTFSDRDAGGRXGRGLQTFDLRITIHAVTAVEAALL 173 LEDAR LVVG I Y +LN++R+TF+DRDAGGR GLQTFDLRITIHAVT +EAALL Sbjct: 67 LEDARSLVVGSPIGTYQKILNQVRQTFADRDAGGR---GLQTFDLRITIHAVTGLEAALL 123 Query: 174 DLLGKFLGVPVAALLGEGQQRDKVEMLGYLFYVGDRNATDLDYHSEPDNADDWQRLRHEK 233 DLLG+ L VPVAALLGEGQQRD+V+MLGYLFYVGDR TDL Y SEPD +DW R+RHEK Sbjct: 124 DLLGQHLDVPVAALLGEGQQRDEVKMLGYLFYVGDRRETDLAYRSEPDADNDWFRVRHEK 183 Query: 234 AMDAEAIVRLAEAAYRRYGFNDFKLKGGVLRGEDEIEAIAALHERFPQARITLDPNGGWL 293 AM A+A+VRLAEAA+ RYGF DFKLKGGVL G+ EIEA+ AL ERFP ARITLDPNG W Sbjct: 184 AMTADAVVRLAEAAHARYGFKDFKLKGGVLSGDAEIEAVTALAERFPDARITLDPNGAWS 243 Query: 294 LKDAIRLCRDQHGVLAYAEDPCGAENGYSGREVMAEFRRATGLQTATNMIATDWREMGHT 353 LK+AIRLCRDQH VLAYAEDPCGAENGYSGREVMAEFRRATGL+TATNMIATDWREMGH Sbjct: 244 LKEAIRLCRDQHHVLAYAEDPCGAENGYSGREVMAEFRRATGLKTATNMIATDWREMGHA 303 Query: 354 IRLQSVDIPLADPHFWTMQGSIRVAQLCNEWGLTWGSHSNNHFDISLAMFTQVAAAAPGK 413 I+LQSVDIPLADPHFWTMQGS+RVAQ+C+EWGLTWGSHSNNHFDISLAMFT VAAAAPG Sbjct: 304 IQLQSVDIPLADPHFWTMQGSVRVAQMCHEWGLTWGSHSNNHFDISLAMFTHVAAAAPGD 363 Query: 414 ITAIDTHWIWQDGQRLTREPFRIVGGMVDVPAAPGLGVEIDMEQVLAANALYKAKGLGAR 473 ITAIDTHWIWQDGQRLT+ P +IV G V +P PGLGVE+DM+QV A+ LYK GLGAR Sbjct: 364 ITAIDTHWIWQDGQRLTKAPLQIVNGCVQMPKKPGLGVELDMDQVAKAHELYKGMGLGAR 423 Query: 474 DDAIAMQYLIPGWKFDNKKPCLVR 497 DD++AMQ+LIPGW FDNKKPCLVR Sbjct: 424 DDSVAMQFLIPGWTFDNKKPCLVR 447