BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0037.p         (460 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004152507.1| threonine dehydratase [Variovorax paradoxus ...   330   4e-88
ref|YP_002942078.1| threonine dehydratase [Variovorax paradoxus ...   318   2e-84
ref|YP_968528.1| threonine dehydratase [Acidovorax citrulli AAC0...   300   4e-79
ref|ZP_04762890.1| threonine dehydratase [Acidovorax delafieldii...   300   5e-79
ref|YP_004232670.1| threonine dehydratase [Acidovorax avenae sub...   297   2e-78

>ref|YP_004152507.1| threonine dehydratase [Variovorax paradoxus EPS]
 gb|ADU34396.1| threonine dehydratase [Variovorax paradoxus EPS]
          Length = 402

 Score =  330 bits (845), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 169/230 (73%), Positives = 181/230 (78%), Gaps = 11/230 (4%)

Query: 220 VGVAGIQRAAARLQGQILNTPCVESRTLSEIVGAQVFLKFENLQFTSSFKERGACNKLTD 279
           VG+  I+RAA RLQGQ+LNTPCVESRTLSEIVGAQVFLKFENLQFTSSFKERGACNKL D
Sbjct: 5   VGIEEIRRAAVRLQGQVLNTPCVESRTLSEIVGAQVFLKFENLQFTSSFKERGACNKLVD 64

Query: 280 LAAAGVRGVIAMSAGNHAQGVAYHAQRLGLHALIVMPRFTPGVKIERTRGFGAEVVLHGD 339
           L+ AG RGVIAMSAGNHAQGVAYHAQRLGL ALIVMPRFTPGVKIERTRGFGAEVVLHGD
Sbjct: 65  LSEAGTRGVIAMSAGNHAQGVAYHAQRLGLRALIVMPRFTPGVKIERTRGFGAEVVLHGD 124

Query: 340 TLEEARAHAFALAQERGLTFVHPYDDEAIIAGQGTVALEMLDAVPDLDTLVVAIGGGGLX 399
           TL+ ARAHA  LA+  GL FVHPYDDEAIIAGQGTVALEMLDAVPDLDTLVVA+GGGGL 
Sbjct: 125 TLDAARAHALELAEREGLAFVHPYDDEAIIAGQGTVALEMLDAVPDLDTLVVAVGGGGLI 184

Query: 400 LDTLVVAIGGGARAQTRHRHRRRAGQALPVDDQRRAGHHPCARHQHHRRG 449
               V A           R R+   + + V   R  G     +  HH +G
Sbjct: 185 AGMAVAA-----------RDRKPGIEIVGVQTTRFPGMVNAIKGTHHAQG 223


>ref|YP_002942078.1| threonine dehydratase [Variovorax paradoxus S110]
 gb|ACS16812.1| threonine dehydratase [Variovorax paradoxus S110]
          Length = 409

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 156/186 (83%), Positives = 166/186 (89%), Gaps = 7/186 (3%)

Query: 220 VGVAGIQRAAARLQGQILNTPCVESRTLSEIVGAQVFLKFENLQFTSSFKERGACNKLTD 279
           VG+  I+RAAARL+GQ+LNTPCVESRTLSEIVGAQV+LKFENLQFTSSFKERGACNKL D
Sbjct: 5   VGIEEIRRAAARLEGQVLNTPCVESRTLSEIVGAQVYLKFENLQFTSSFKERGACNKLVD 64

Query: 280 LAAA-------GVRGVIAMSAGNHAQGVAYHAQRLGLHALIVMPRFTPGVKIERTRGFGA 332
           L  A         RGV+AMSAGNHAQGVAYHAQRLGL ALIVMPRFTPGVKIERTRGFGA
Sbjct: 65  LLEADTRDGQEATRGVVAMSAGNHAQGVAYHAQRLGLRALIVMPRFTPGVKIERTRGFGA 124

Query: 333 EVVLHGDTLEEARAHAFALAQERGLTFVHPYDDEAIIAGQGTVALEMLDAVPDLDTLVVA 392
           EVVLHGDTL+ ARAHA  LA+  GLTFVHPYDDEAIIAGQGTVALEMLDAVPDLDTLVV+
Sbjct: 125 EVVLHGDTLDAARAHALELAEREGLTFVHPYDDEAIIAGQGTVALEMLDAVPDLDTLVVS 184

Query: 393 IGGGGL 398
           +GGGGL
Sbjct: 185 VGGGGL 190


>ref|YP_968528.1| threonine dehydratase [Acidovorax citrulli AAC00-1]
 gb|ABM30754.1| L-threonine ammonia-lyase [Acidovorax citrulli AAC00-1]
          Length = 402

 Score =  300 bits (767), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 144/170 (84%), Positives = 157/170 (92%), Gaps = 1/170 (0%)

Query: 225 IQRAAARLQGQILNTPCVESRTLSEIVGAQVFLKFENLQFTSSFKERGACNKLTDLAAAG 284
           IQ AAARLQGQ+L+TPCVESRTLS+IVGAQVFLKFENLQFT+SFKERGACNKL+ L+   
Sbjct: 10  IQAAAARLQGQVLDTPCVESRTLSQIVGAQVFLKFENLQFTASFKERGACNKLSQLSPEE 69

Query: 285 VR-GVIAMSAGNHAQGVAYHAQRLGLHALIVMPRFTPGVKIERTRGFGAEVVLHGDTLEE 343
            R GVIAMSAGNHAQGVAYHAQRLGL A+IVMPRFTPGVK+ERTRGFGAEVVLHGDTLEE
Sbjct: 70  QRRGVIAMSAGNHAQGVAYHAQRLGLAAVIVMPRFTPGVKVERTRGFGAEVVLHGDTLEE 129

Query: 344 ARAHAFALAQERGLTFVHPYDDEAIIAGQGTVALEMLDAVPDLDTLVVAI 393
           ARAHA+ALA+ERGLTFVHPYDDEA+ AGQGTV LEML AVPDLD L +A+
Sbjct: 130 ARAHAYALAEERGLTFVHPYDDEAVAAGQGTVGLEMLQAVPDLDCLAIAV 179


>ref|ZP_04762890.1| threonine dehydratase [Acidovorax delafieldii 2AN]
 gb|EER60289.1| threonine dehydratase [Acidovorax delafieldii 2AN]
          Length = 402

 Score =  300 bits (767), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 144/175 (82%), Positives = 158/175 (90%), Gaps = 1/175 (0%)

Query: 225 IQRAAARLQGQILNTPCVESRTLSEIVGAQVFLKFENLQFTSSFKERGACNKLTDLAAAG 284
           I+ AA RL+GQ+L+TPCVESRTLS+IVGAQVFLKFENLQFT+SFKERGACNKLT L  A 
Sbjct: 10  IRDAATRLRGQVLDTPCVESRTLSDIVGAQVFLKFENLQFTASFKERGACNKLTLLTPAE 69

Query: 285 -VRGVIAMSAGNHAQGVAYHAQRLGLHALIVMPRFTPGVKIERTRGFGAEVVLHGDTLEE 343
             RGV+AMSAGNHAQGVAYHAQRLGL A+IVMPRFTPGVK+ERTRGFGAEVVLHGDTLEE
Sbjct: 70  RARGVVAMSAGNHAQGVAYHAQRLGLRAVIVMPRFTPGVKVERTRGFGAEVVLHGDTLEE 129

Query: 344 ARAHAFALAQERGLTFVHPYDDEAIIAGQGTVALEMLDAVPDLDTLVVAIGGGGL 398
           ARAHA+ LA   GL FVHPYDDEA+ AGQGT+ LEML AVPDLDTLV+A+GGGGL
Sbjct: 130 ARAHAYRLADTEGLVFVHPYDDEAVAAGQGTLGLEMLQAVPDLDTLVIAVGGGGL 184


>ref|YP_004232670.1| threonine dehydratase [Acidovorax avenae subsp. avenae ATCC 19860]
 gb|ADX44103.1| threonine dehydratase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 399

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 143/170 (84%), Positives = 156/170 (91%), Gaps = 1/170 (0%)

Query: 225 IQRAAARLQGQILNTPCVESRTLSEIVGAQVFLKFENLQFTSSFKERGACNKLTDLAAAG 284
           IQ AAARLQGQ+L+TPCVESRTLS+IVGAQVFLKFENLQFT+SFKERGACNKL+ L+   
Sbjct: 7   IQAAAARLQGQVLDTPCVESRTLSQIVGAQVFLKFENLQFTASFKERGACNKLSQLSPEE 66

Query: 285 VR-GVIAMSAGNHAQGVAYHAQRLGLHALIVMPRFTPGVKIERTRGFGAEVVLHGDTLEE 343
            R GVIAMSAGNHAQGVAYHAQRLGL A+IVMPRFTPGVK+ERTRGF AEVVLHGDTLEE
Sbjct: 67  QRRGVIAMSAGNHAQGVAYHAQRLGLVAVIVMPRFTPGVKVERTRGFSAEVVLHGDTLEE 126

Query: 344 ARAHAFALAQERGLTFVHPYDDEAIIAGQGTVALEMLDAVPDLDTLVVAI 393
           ARAHA+ALA+ERGLTFVHPYDDEA+ AGQGTV LEML AVPDLD L +A+
Sbjct: 127 ARAHAYALAEERGLTFVHPYDDEAVAAGQGTVGLEMLQAVPDLDCLAIAV 176