BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0029.0031.p         (174 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004359753.1| 4Fe-4S ferredoxin iron-sulfur binding domain...   156   1e-36
ref|ZP_04945995.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkh...   153   8e-36
ref|ZP_02382891.1| 4Fe-4S ferredoxin, iron-sulfur binding protei...   153   1e-35
ref|ZP_02883564.1| 4Fe-4S ferredoxin iron-sulfur binding domain ...   151   3e-35
ref|YP_002231584.1| 4Fe-4S ferredoxin [Burkholderia cenocepacia ...   151   4e-35

>ref|YP_004359753.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein
          [Burkholderia gladioli BSR3]
 gb|AEA59797.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein
          [Burkholderia gladioli BSR3]
          Length = 98

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 73/88 (82%), Positives = 78/88 (88%)

Query: 5  CKQAPGVIVPAVNLKRCEGKGDCLVVCPEDVFEIRRIDDADYQSLGMLNKFKLRVHGMHV 64
          CKQ PGVIVP V+L+RCEGKGDCL VCPEDVFEIRRID+ADY+ LGMLN+FKLRVHGM V
Sbjct: 9  CKQEPGVIVPVVDLRRCEGKGDCLEVCPEDVFEIRRIDEADYRGLGMLNRFKLRVHGMKV 68

Query: 65 AYTPNADACRACGLCVTACPERAITLVR 92
          AYTPNADACRACG CV ACPE AI L R
Sbjct: 69 AYTPNADACRACGRCVEACPEHAIKLAR 96


>ref|ZP_04945995.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia dolosa
          AUO158]
 gb|EAY69166.1| 4Fe-4S ferredoxin, iron-sulfur binding [Burkholderia dolosa
          AUO158]
          Length = 100

 Score =  153 bits (387), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 68/90 (75%), Positives = 79/90 (87%)

Query: 3  GGCKQAPGVIVPAVNLKRCEGKGDCLVVCPEDVFEIRRIDDADYQSLGMLNKFKLRVHGM 62
            CKQ PGVI P V+LKRCEGK DC+ VCPE+VFE+RRIDDADY +LG++++ K+RVHGM
Sbjct: 9  SDCKQRPGVIAPVVDLKRCEGKADCVTVCPENVFEVRRIDDADYGALGLMHRMKIRVHGM 68

Query: 63 HVAYTPNADACRACGLCVTACPERAITLVR 92
           VAYTPNADACR+CGLCVTACPERAITL R
Sbjct: 69 KVAYTPNADACRSCGLCVTACPERAITLAR 98


>ref|ZP_02382891.1| 4Fe-4S ferredoxin, iron-sulfur binding protein [Burkholderia
          ubonensis Bu]
          Length = 100

 Score =  153 bits (386), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 70/91 (76%), Positives = 78/91 (85%)

Query: 2  AGGCKQAPGVIVPAVNLKRCEGKGDCLVVCPEDVFEIRRIDDADYQSLGMLNKFKLRVHG 61
           G CKQ PGVI P V+LKRCEGKGDC+ VCPE+VFEIRRID ADY  LG++++ KLRVHG
Sbjct: 8  TGDCKQQPGVIAPIVDLKRCEGKGDCITVCPENVFEIRRIDQADYLGLGLMHRLKLRVHG 67

Query: 62 MHVAYTPNADACRACGLCVTACPERAITLVR 92
          M VAYTPNA ACR+CGLCVTACPERAITL R
Sbjct: 68 MKVAYTPNAHACRSCGLCVTACPERAITLAR 98


>ref|ZP_02883564.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein
          [Burkholderia graminis C4D1M]
 gb|EDT10996.1| 4Fe-4S ferredoxin iron-sulfur binding domain protein
          [Burkholderia graminis C4D1M]
          Length = 98

 Score =  151 bits (382), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 69/90 (76%), Positives = 79/90 (87%)

Query: 5  CKQAPGVIVPAVNLKRCEGKGDCLVVCPEDVFEIRRIDDADYQSLGMLNKFKLRVHGMHV 64
          CKQ PGVI P V+L+RCEGKGDC+ VCPE+VFEIRRID+ADY SLG++++ K RVHGM V
Sbjct: 9  CKQEPGVIAPVVDLRRCEGKGDCVNVCPENVFEIRRIDEADYLSLGLMHRLKQRVHGMKV 68

Query: 65 AYTPNADACRACGLCVTACPERAITLVRAA 94
          AYTPNADACR+CGLCVTACPERAI L R A
Sbjct: 69 AYTPNADACRSCGLCVTACPERAIKLARTA 98


>ref|YP_002231584.1| 4Fe-4S ferredoxin [Burkholderia cenocepacia J2315]
 emb|CAR52761.1| 4Fe-4S ferredoxin [Burkholderia cenocepacia J2315]
          Length = 98

 Score =  151 bits (381), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 69/93 (74%), Positives = 79/93 (84%)

Query: 2  AGGCKQAPGVIVPAVNLKRCEGKGDCLVVCPEDVFEIRRIDDADYQSLGMLNKFKLRVHG 61
          A  CKQ  GVI P V+LKRCEGKGDC+ VCPE+VFE+RRID+ADY  LG++++ KLRVHG
Sbjct: 6  AADCKQKAGVIAPVVDLKRCEGKGDCVTVCPENVFEVRRIDEADYLDLGLMHRLKLRVHG 65

Query: 62 MHVAYTPNADACRACGLCVTACPERAITLVRAA 94
          M VAYTPNA ACR+CGLCVTACPERAITL R A
Sbjct: 66 MKVAYTPNAQACRSCGLCVTACPERAITLARRA 98