BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0030.p (295 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775882.1| short-chain dehydrogenase/reductase family p... 368 e-100 ref|YP_969914.1| short-chain dehydrogenase/reductase SDR [Acidov... 328 5e-88 ref|YP_004234077.1| 3-oxoacyl-(acyl-carrier-protein) reductase [... 328 9e-88 ref|YP_004231946.1| short-chain dehydrogenase/reductase SDR [Bur... 318 6e-85 ref|YP_004153023.1| short-chain dehydrogenase/reductase sdr [Var... 318 6e-85 >ref|YP_003775882.1| short-chain dehydrogenase/reductase family protein [Herbaspirillum seropedicae SmR1] gb|ADJ63974.1| short-chain dehydrogenase/reductase family protein [Herbaspirillum seropedicae SmR1] Length = 261 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 179/253 (70%), Positives = 207/253 (81%) Query: 43 MNRFEDKVVIVTGAASGMGKATAHRFSKEGAKVVLADRQHEKLQETLEELPADRTAARLT 102 + RFE KVVIVTGAASG+G+ATA RFS EGA+V+LADR L + + LP +RTAAR T Sbjct: 9 LQRFEGKVVIVTGAASGIGEATARRFSDEGARVLLADRDAAALGKVFDSLPPERTAARET 68 Query: 103 DVSAHEQVRDLIDFAIEKFGKLDVLVNDAGIHVPGNVLEVSVDDWHRVQANNVDSVFFGA 162 DVS HEQVR L+DFAIE+FG+LDVLV+DAG+ GNV EVS +DWHRVQA NV+ VF+GA Sbjct: 69 DVSHHEQVRQLVDFAIERFGQLDVLVSDAGVFAEGNVTEVSPEDWHRVQATNVNGVFYGA 128 Query: 163 REAIPHLAKTKGSIVNVASVSGLGGDWGMSAYDTSKGAVVNLTRVLALDFAKKGIRVNSV 222 REA+PHL KT+G IVNVASVSGL DW +SAY+ SKGAV NLTR +ALDF +KG+R+N+V Sbjct: 129 REALPHLEKTRGCIVNVASVSGLAADWNLSAYNASKGAVCNLTRAMALDFGRKGVRINAV 188 Query: 223 CPSFTYTAMTADMVDDKELMAKFAERIPLGRGAQPEEIASVIAFLASEDARFVTGVNLPV 282 CPS T+TAMTADM DD L+ KFAERI LGRGA P EIA+VI FLAS DA FV GVNLPV Sbjct: 189 CPSLTHTAMTADMADDPPLLDKFAERIALGRGADPLEIAAVITFLASPDASFVNGVNLPV 248 Query: 283 DGGLTASNGQPAQ 295 DGGL ASNGQP Q Sbjct: 249 DGGLMASNGQPPQ 261 >ref|YP_969914.1| short-chain dehydrogenase/reductase SDR [Acidovorax citrulli AAC00-1] gb|ABM32140.1| short-chain dehydrogenase/reductase SDR [Acidovorax citrulli AAC00-1] Length = 270 Score = 328 bits (842), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 167/251 (66%), Positives = 192/251 (76%) Query: 45 RFEDKVVIVTGAASGMGKATAHRFSKEGAKVVLADRQHEKLQETLEELPADRTAARLTDV 104 RF KVVIVTGA SG+G ATA RFS+EGA V +AD +KL T +LPADRT A DV Sbjct: 19 RFAGKVVIVTGAGSGIGAATARRFSQEGAMVAIADLSDDKLAATRADLPADRTLAHPADV 78 Query: 105 SAHEQVRDLIDFAIEKFGKLDVLVNDAGIHVPGNVLEVSVDDWHRVQANNVDSVFFGARE 164 S E V+ L+D +++FG LDV+VN+AGI V G V E S+DDW RV A NV VF GAR Sbjct: 79 SKFEDVQALVDATVQRFGHLDVMVNNAGIAVQGKVTEASLDDWQRVLATNVSGVFHGARA 138 Query: 165 AIPHLAKTKGSIVNVASVSGLGGDWGMSAYDTSKGAVVNLTRVLALDFAKKGIRVNSVCP 224 A+PHL KT+G IVN +SVSGLGGDW MS Y+TSKGAV N TR LALD K G+RVN+V P Sbjct: 139 AMPHLLKTRGCIVNTSSVSGLGGDWDMSFYNTSKGAVSNFTRALALDHGKDGVRVNAVAP 198 Query: 225 SFTYTAMTADMVDDKELMAKFAERIPLGRGAQPEEIASVIAFLASEDARFVTGVNLPVDG 284 S T+T MT D+ D EL+AKFAERIPLGRGA+PEEIASVIAFLAS DA FVTGV LPVDG Sbjct: 199 SLTFTGMTEDIKGDPELLAKFAERIPLGRGAEPEEIASVIAFLASPDAGFVTGVVLPVDG 258 Query: 285 GLTASNGQPAQ 295 G++ASNGQP Q Sbjct: 259 GVSASNGQPPQ 269 >ref|YP_004234077.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Acidovorax avenae subsp. avenae ATCC 19860] gb|ADX45510.1| 3-oxoacyl-(acyl-carrier-protein) reductase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 267 Score = 328 bits (840), Expect = 9e-88, Method: Compositional matrix adjust. Identities = 171/267 (64%), Positives = 196/267 (73%), Gaps = 2/267 (0%) Query: 29 APPRPQGNLTLETAMNRFEDKVVIVTGAASGMGKATAHRFSKEGAKVVLADRQHEKLQET 88 A P PQ T RF KVVIVTGA SG+G ATA RFS+EGA V +AD +KL T Sbjct: 2 ASPSPQS--TSADPSRRFAGKVVIVTGAGSGIGAATARRFSQEGAMVAIADLSDDKLAAT 59 Query: 89 LEELPADRTAARLTDVSAHEQVRDLIDFAIEKFGKLDVLVNDAGIHVPGNVLEVSVDDWH 148 +LPADRT A DVS E V+ L+ +E+FG LDV+VN+AGI V G V E S++DW Sbjct: 60 RADLPADRTLAHPADVSKFEDVQALVAATVERFGHLDVMVNNAGIAVQGKVTEASLEDWQ 119 Query: 149 RVQANNVDSVFFGAREAIPHLAKTKGSIVNVASVSGLGGDWGMSAYDTSKGAVVNLTRVL 208 RV A NV VF GAR A+PHL KT+G IVN +SVSGLGGDW MS Y+TSKGAV N TR L Sbjct: 120 RVLATNVSGVFHGARVAMPHLLKTRGCIVNTSSVSGLGGDWDMSFYNTSKGAVSNFTRAL 179 Query: 209 ALDFAKKGIRVNSVCPSFTYTAMTADMVDDKELMAKFAERIPLGRGAQPEEIASVIAFLA 268 ALD K G+RVN+V PS T+T MT D+ D EL+AKFAERIPLGRGA+PEEIASVIAFLA Sbjct: 180 ALDHGKDGVRVNAVAPSLTFTGMTEDIKSDPELLAKFAERIPLGRGAEPEEIASVIAFLA 239 Query: 269 SEDARFVTGVNLPVDGGLTASNGQPAQ 295 S DA FVTGV LPVDGG++ASNGQP Q Sbjct: 240 SPDAGFVTGVVLPVDGGVSASNGQPPQ 266 >ref|YP_004231946.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1001] gb|ADX58886.1| short-chain dehydrogenase/reductase SDR [Burkholderia sp. CCGE1001] Length = 260 Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 153/252 (60%), Positives = 193/252 (76%) Query: 44 NRFEDKVVIVTGAASGMGKATAHRFSKEGAKVVLADRQHEKLQETLEELPADRTAARLTD 103 NRF KVV+VTGA SG+G+ TA RF+ EGA VVLA R EKL+ +L +RT D Sbjct: 8 NRFHSKVVVVTGAGSGIGEGTARRFAAEGASVVLAGRTREKLERVARDLDGERTLVHPCD 67 Query: 104 VSAHEQVRDLIDFAIEKFGKLDVLVNDAGIHVPGNVLEVSVDDWHRVQANNVDSVFFGAR 163 VS++E L+D + +FG LDVLVN+AG+ G + E S+DDW + + ++D VF+ +R Sbjct: 68 VSSYEAAGQLMDATLARFGHLDVLVNNAGVAPTGRIDEASLDDWRAIMSTDLDGVFYCSR 127 Query: 164 EAIPHLAKTKGSIVNVASVSGLGGDWGMSAYDTSKGAVVNLTRVLALDFAKKGIRVNSVC 223 AI HL +T+GSIVNV+SVSGLGGDWGMS Y+ +KGAV N TR LALD + G+RVN+VC Sbjct: 128 AAIRHLVQTRGSIVNVSSVSGLGGDWGMSFYNAAKGAVTNFTRALALDHGRDGVRVNAVC 187 Query: 224 PSFTYTAMTADMVDDKELMAKFAERIPLGRGAQPEEIASVIAFLASEDARFVTGVNLPVD 283 PSFT T +T DM+ D++LMAKF ERIPLGR A+P++IA+VIAFLAS+DARFVTGVNLPVD Sbjct: 188 PSFTATDLTQDMLSDEKLMAKFRERIPLGRAAEPDDIAAVIAFLASDDARFVTGVNLPVD 247 Query: 284 GGLTASNGQPAQ 295 GGL+ASNGQP Q Sbjct: 248 GGLSASNGQPPQ 259 >ref|YP_004153023.1| short-chain dehydrogenase/reductase sdr [Variovorax paradoxus EPS] gb|ADU34912.1| short-chain dehydrogenase/reductase SDR [Variovorax paradoxus EPS] Length = 254 Score = 318 bits (815), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 155/251 (61%), Positives = 187/251 (74%) Query: 43 MNRFEDKVVIVTGAASGMGKATAHRFSKEGAKVVLADRQHEKLQETLEELPADRTAARLT 102 M RF DKVVIVTGA SG+G+ATA RFS+EGA VVLA KL +LP +RT ++T Sbjct: 1 MQRFTDKVVIVTGAGSGIGEATARRFSQEGANVVLAGNTKAKLDRVARDLPPERTLVKVT 60 Query: 103 DVSAHEQVRDLIDFAIEKFGKLDVLVNDAGIHVPGNVLEVSVDDWHRVQANNVDSVFFGA 162 DVS ++QV+ L+ +++FG L VL N+AGI V G V E D W ++ A NV VF G Sbjct: 61 DVSNYKQVQALVAATLKRFGALHVLFNNAGIAVEGTVTEAPFDGWDKIMATNVGGVFHGC 120 Query: 163 REAIPHLAKTKGSIVNVASVSGLGGDWGMSAYDTSKGAVVNLTRVLALDFAKKGIRVNSV 222 R A+PHL ++KG IVN SVSGLGGDWGM Y+ SKGA+VN T+ LALD + G+RVN+V Sbjct: 121 RAAMPHLIESKGCIVNTGSVSGLGGDWGMGFYNASKGAIVNFTKALALDHGRDGVRVNAV 180 Query: 223 CPSFTYTAMTADMVDDKELMAKFAERIPLGRGAQPEEIASVIAFLASEDARFVTGVNLPV 282 CPS T+T MT DM D++LMAKF ERIPLGRGAQPEEIA+V+AFLAS+DA FV GV LPV Sbjct: 181 CPSLTFTPMTEDMKGDRKLMAKFNERIPLGRGAQPEEIAAVVAFLASDDASFVNGVALPV 240 Query: 283 DGGLTASNGQP 293 DGGL ASNGQP Sbjct: 241 DGGLMASNGQP 251