BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0029.0011.p (476 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003773439.1| chromosomal replication initiator protein [H... 820 0.0 ref|YP_001098370.1| chromosomal replication initiation protein [... 818 0.0 ref|YP_004750663.1| chromosomal replication initiator protein [C... 813 0.0 ref|YP_001351691.1| chromosomal replication initiation protein [... 812 0.0 ref|ZP_08273137.1| Chromosomal replication initiator protein Dna... 811 0.0 >ref|YP_003773439.1| chromosomal replication initiator protein [Herbaspirillum seropedicae SmR1] gb|ADJ61531.1| chromosomal replication initiator protein [Herbaspirillum seropedicae SmR1] Length = 465 Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/476 (87%), Positives = 424/476 (89%), Gaps = 11/476 (2%) Query: 1 MENFWQACSAKLEQELTPQQYSAWIKPLAPLDYEDGRLRIAAPNRFKLDWVKTQFAGRIT 60 MENFWQACS KLEQELTPQQYSAWIKPL PLDYEDG LR+AAPNRFKLDWVKTQFA RIT Sbjct: 1 MENFWQACSQKLEQELTPQQYSAWIKPLVPLDYEDGLLRVAAPNRFKLDWVKTQFANRIT 60 Query: 61 TIASEYWETQIEVQFVLDPRVGEARRAAAAAAPQGAGQGAGPGQPNRVGSMLDGYPTGIQ 120 +A EYW+ EVQFVLDPR + RR AAAAA G G PN LD P Sbjct: 61 ALACEYWDAPTEVQFVLDPRGNQGRRPAAAAAAGNGASGLG--LPNHEQLHLDPEPA--- 115 Query: 121 ESLVQPAPPPHVAPRQELSRINSVLTFDNLVTGKANQLARAAATQVANNPGVSYNPLFLY 180 P VAPRQE SRIN VLTFDNLVTGKANQLARAAATQVANNPG SYNPLFLY Sbjct: 116 ------QPVRAVAPRQEQSRINPVLTFDNLVTGKANQLARAAATQVANNPGTSYNPLFLY 169 Query: 181 GGVGLGKTHVIHAIGNQVLADNPNAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDL 240 GGVGLGKTH+IHAIGNQVL DNP AKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDL Sbjct: 170 GGVGLGKTHIIHAIGNQVLVDNPGAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDL 229 Query: 241 LLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGLT 300 LLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGLT Sbjct: 230 LLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGLT 289 Query: 301 VAIEPPELEMRVAILMKKATLEGVVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHG 360 VAIEPPELEMRVAILMKKA+ E VVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHG Sbjct: 290 VAIEPPELEMRVAILMKKASAEDVVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHG 349 Query: 361 KDITIDVVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAM 420 KDITIDVVK+ALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAM Sbjct: 350 KDITIDVVKEALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAM 409 Query: 421 YLAKELTQKSLPEIGDLFGGRDHTTVLHAVRKISADRTKNPECNHELHVLEQTLKG 476 YLAKELTQKSLPEIGDLFGGRDHTTVLHAVRKI+ADR K+PECNHELHVLEQTLKG Sbjct: 410 YLAKELTQKSLPEIGDLFGGRDHTTVLHAVRKIAADRAKSPECNHELHVLEQTLKG 465 >ref|YP_001098370.1| chromosomal replication initiation protein [Herminiimonas arsenicoxydans] sp|A4G154.1|DNAA_HERAR RecName: Full=Chromosomal replication initiator protein DnaA emb|CAL60241.1| Chromosomal replication initiator protein DnaA [Herminiimonas arsenicoxydans] Length = 460 Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/476 (84%), Positives = 424/476 (89%), Gaps = 16/476 (3%) Query: 1 MENFWQACSAKLEQELTPQQYSAWIKPLAPLDYEDGRLRIAAPNRFKLDWVKTQFAGRIT 60 MENFWQACSA+LEQELTPQQYSAWIKPL PLDYEDG LRIAAPNRFKLDWVKTQFA RIT Sbjct: 1 MENFWQACSAQLEQELTPQQYSAWIKPLTPLDYEDGTLRIAAPNRFKLDWVKTQFASRIT 60 Query: 61 TIASEYWETQIEVQFVLDPRVGEARRAAAAAAPQGAGQGAGPGQPNRVGSMLDGYPTGIQ 120 +IA+++WE +EVQFVLDPR+ ARR AA Q + V D P+ + Sbjct: 61 SIAAQFWEVPVEVQFVLDPRLVAARRPAA--------------QASVVSDRADDVPSNVL 106 Query: 121 ESLVQPAPPPHVAPRQELSRINSVLTFDNLVTGKANQLARAAATQVANNPGVSYNPLFLY 180 E + P+ PR++ SRIN+ LTFD+ VTGKANQLARAAA QVANNPG SYNPLFLY Sbjct: 107 EPI--PSNATDHTPRRDQSRINTALTFDSFVTGKANQLARAAAIQVANNPGSSYNPLFLY 164 Query: 181 GGVGLGKTHVIHAIGNQVLADNPNAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDL 240 GGVGLGKTH+IHAIGNQVLADNPN KIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDL Sbjct: 165 GGVGLGKTHLIHAIGNQVLADNPNVKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLDL 224 Query: 241 LLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGLT 300 LLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEI+GMDDRLISRFDSGLT Sbjct: 225 LLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEITGMDDRLISRFDSGLT 284 Query: 301 VAIEPPELEMRVAILMKKATLEGVVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHG 360 VA+EPPELEMRVAIL+KKA EGV SDDVAFFVAKHLRSNVRELEGALRKILAYSRFHG Sbjct: 285 VAVEPPELEMRVAILLKKAVQEGVTFSDDVAFFVAKHLRSNVRELEGALRKILAYSRFHG 344 Query: 361 KDITIDVVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAM 420 KDITI+VVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAM Sbjct: 345 KDITIEVVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIAM 404 Query: 421 YLAKELTQKSLPEIGDLFGGRDHTTVLHAVRKISADRTKNPECNHELHVLEQTLKG 476 YLAKELTQKSLPEIG+LFGGRDHTTVLHAVRKI+ADR K+PECNHELHVLEQTLKG Sbjct: 405 YLAKELTQKSLPEIGELFGGRDHTTVLHAVRKIAADRGKSPECNHELHVLEQTLKG 460 >ref|YP_004750663.1| chromosomal replication initiator protein [Collimonas fungivorans Ter331] gb|AEK59840.1| chromosomal replication initiator protein [Collimonas fungivorans Ter331] Length = 476 Score = 813 bits (2099), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/484 (82%), Positives = 424/484 (87%), Gaps = 16/484 (3%) Query: 1 MENFWQACSAKLEQELTPQQYSAWIKPLAPLDYEDGRLRIAAPNRFKLDWVKTQFAGRIT 60 MENFWQ+CS +LEQELTPQQ+SAWIKPLAPLDYEDGRLRIAAPNRFKLDWVKTQFA RIT Sbjct: 1 MENFWQSCSTQLEQELTPQQFSAWIKPLAPLDYEDGRLRIAAPNRFKLDWVKTQFASRIT 60 Query: 61 TIASEYWETQIEVQFVLDPRVGEARRAAAAAAP--------QGAGQGAGPGQPNRVGSML 112 T+A +YWE IEV FVLDPR A A+++ P Q Q + G + S Sbjct: 61 TLAHQYWEAPIEVVFVLDPR-KSAPAPASSSMPVAINNSNEQAGAQSSAAGGGSYGNSNF 119 Query: 113 DGYPTGIQESLVQPAPPPHVAPRQELSRINSVLTFDNLVTGKANQLARAAATQVANNPGV 172 D P E+ A R++ SRIN+ L+FD+ VTGKANQLARAAA QVANNPGV Sbjct: 120 DRLPEVQTENSTASA-------RRDQSRINTALSFDSFVTGKANQLARAAAIQVANNPGV 172 Query: 173 SYNPLFLYGGVGLGKTHVIHAIGNQVLADNPNAKIRYIHAEQYVRDVVTAYQRKGFDDFK 232 SYNPLFLYGGVGLGKTH+IHAIGNQ+LADNPN+KIRYIHAEQYVRDVVTAYQRKGFDDFK Sbjct: 173 SYNPLFLYGGVGLGKTHLIHAIGNQLLADNPNSKIRYIHAEQYVRDVVTAYQRKGFDDFK 232 Query: 233 RYYHSLDLLLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLI 292 RYYHSLDLLLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEI+GMDDRLI Sbjct: 233 RYYHSLDLLLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEITGMDDRLI 292 Query: 293 SRFDSGLTVAIEPPELEMRVAILMKKATLEGVVLSDDVAFFVAKHLRSNVRELEGALRKI 352 SRFDSGLTVAIEPPELEMRVAIL+KKA EGV SDDVAFFVAKHLRSNVRELEGALRKI Sbjct: 293 SRFDSGLTVAIEPPELEMRVAILLKKAASEGVTFSDDVAFFVAKHLRSNVRELEGALRKI 352 Query: 353 LAYSRFHGKDITIDVVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANI 412 LAYSRFHGKDI+IDVVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANI Sbjct: 353 LAYSRFHGKDISIDVVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANI 412 Query: 413 ARPRQIAMYLAKELTQKSLPEIGDLFGGRDHTTVLHAVRKISADRTKNPECNHELHVLEQ 472 ARPRQIAMYLAKELTQKSLPEIG+LFGGRDHTTVLHAVRKI+ DRTKNPECNHELHVLEQ Sbjct: 413 ARPRQIAMYLAKELTQKSLPEIGELFGGRDHTTVLHAVRKIAGDRTKNPECNHELHVLEQ 472 Query: 473 TLKG 476 TLKG Sbjct: 473 TLKG 476 >ref|YP_001351691.1| chromosomal replication initiation protein [Janthinobacterium sp. Marseille] sp|A6STW2.1|DNAA_JANMA RecName: Full=Chromosomal replication initiator protein DnaA gb|ABR89537.1| chromosomal replication initiator protein DnaA [Janthinobacterium sp. Marseille] Length = 460 Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/477 (82%), Positives = 426/477 (89%), Gaps = 18/477 (3%) Query: 1 MENFWQACSAKLEQELTPQQYSAWIKPLAPLDYEDGRLRIAAPNRFKLDWVKTQFAGRIT 60 MENFWQ CSA+LEQELTPQQYSAWIKPLAPLDYEDG LRIAAPNRFKLDWVKTQFAGRIT Sbjct: 1 MENFWQTCSAQLEQELTPQQYSAWIKPLAPLDYEDGTLRIAAPNRFKLDWVKTQFAGRIT 60 Query: 61 TIASEYWETQIEVQFVLDPRVGEARRAAAAAAPQGAGQGAGPGQPNRV-GSMLDGYPTGI 119 +IA+++W+ ++VQFVLDPR+ A++ +A+ P Q + V S+L+ P+ Sbjct: 61 SIAAQFWDMPVDVQFVLDPRLASAKKPTTSAS-------VAPIQSDDVPASVLEPIPSNA 113 Query: 120 QESLVQPAPPPHVAPRQELSRINSVLTFDNLVTGKANQLARAAATQVANNPGVSYNPLFL 179 + PR++ SRIN+ LTFD+ VTGKANQLARAAA QVANNPG SYNPLFL Sbjct: 114 TDH----------TPRRDQSRINTALTFDSFVTGKANQLARAAAIQVANNPGSSYNPLFL 163 Query: 180 YGGVGLGKTHVIHAIGNQVLADNPNAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLD 239 YGGVGLGKTH+IHAIGNQVLADNP+ KIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLD Sbjct: 164 YGGVGLGKTHLIHAIGNQVLADNPDVKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLD 223 Query: 240 LLLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGL 299 LLLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEI+GMDDRLISRFDSGL Sbjct: 224 LLLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEITGMDDRLISRFDSGL 283 Query: 300 TVAIEPPELEMRVAILMKKATLEGVVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFH 359 TVA+EPPELEMRVAIL+KKA EGV SDDVAFFVAKHLRSNVRELEGALRKILAYSRFH Sbjct: 284 TVAVEPPELEMRVAILLKKAVQEGVTFSDDVAFFVAKHLRSNVRELEGALRKILAYSRFH 343 Query: 360 GKDITIDVVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIA 419 GKDITI+VVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIA Sbjct: 344 GKDITIEVVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIA 403 Query: 420 MYLAKELTQKSLPEIGDLFGGRDHTTVLHAVRKISADRTKNPECNHELHVLEQTLKG 476 MYLAKELTQKSLPEIG+LFGGRDHTTVLHAVRKI+ADR K+PECNHELHVLEQTLKG Sbjct: 404 MYLAKELTQKSLPEIGELFGGRDHTTVLHAVRKIAADRGKSPECNHELHVLEQTLKG 460 >ref|ZP_08273137.1| Chromosomal replication initiator protein DnaA [Oxalobacteraceae bacterium IMCC9480] gb|EGF33394.1| Chromosomal replication initiator protein DnaA [Oxalobacteraceae bacterium IMCC9480] Length = 464 Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/477 (82%), Positives = 424/477 (88%), Gaps = 14/477 (2%) Query: 1 MENFWQACSAKLEQELTPQQYSAWIKPLAPLDYEDGRLRIAAPNRFKLDWVKTQFAGRIT 60 M+NFWQ CSA+LEQELTPQQ+SAWIKPL PLDYE+GRLRIAAPNRFKLDWVKTQFA RIT Sbjct: 1 MDNFWQTCSAQLEQELTPQQFSAWIKPLVPLDYEEGRLRIAAPNRFKLDWVKTQFANRIT 60 Query: 61 TIASEYWETQIEVQFVLDPRVGEARRAAAAAAPQGAGQGAG-PGQPNRVGSMLDGYPTGI 119 +A +YWE I+VQFVLDPR+ R+ AA +G G G VG ++D Sbjct: 61 VLAGQYWEEPIDVQFVLDPRLNAPRKPTAAMPVAARAEGNGINGMSASVGGLID------ 114 Query: 120 QESLVQPAPPPHVAPRQELSRINSVLTFDNLVTGKANQLARAAATQVANNPGVSYNPLFL 179 PP APR++ SR+N+ LTFD+ VTGKANQLARAAA QVA+NPGVSYNPLFL Sbjct: 115 -------LPPVDSAPRRDQSRVNTALTFDSFVTGKANQLARAAAIQVADNPGVSYNPLFL 167 Query: 180 YGGVGLGKTHVIHAIGNQVLADNPNAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLD 239 YGGVGLGKTH++HAIGNQV+ADNP+AKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLD Sbjct: 168 YGGVGLGKTHLVHAIGNQVMADNPSAKIRYIHAEQYVRDVVTAYQRKGFDDFKRYYHSLD 227 Query: 240 LLLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEISGMDDRLISRFDSGL 299 +LLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEI+GMDDRLISRFDSGL Sbjct: 228 VLLIDDIQFFGGKSRTQEEFFYAFEALIAAKKQIIITSDTYPKEITGMDDRLISRFDSGL 287 Query: 300 TVAIEPPELEMRVAILMKKATLEGVVLSDDVAFFVAKHLRSNVRELEGALRKILAYSRFH 359 TVA+EPPELEMRVAIL+KKA EGV SDDVAFFVAKHLRSNVRELEGALRKILA+SRFH Sbjct: 288 TVAVEPPELEMRVAILLKKAAQEGVNFSDDVAFFVAKHLRSNVRELEGALRKILAFSRFH 347 Query: 360 GKDITIDVVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIA 419 GKDITI+VVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIA Sbjct: 348 GKDITIEVVKDALKDLLSVQNRQISVENIQKTVADFFNIKVADMYSKKRPANIARPRQIA 407 Query: 420 MYLAKELTQKSLPEIGDLFGGRDHTTVLHAVRKISADRTKNPECNHELHVLEQTLKG 476 MYLAKELTQKSLPEIG+LFGGRDHTTVLHAVRKI ADR+K+PECNHELHVLEQTLKG Sbjct: 408 MYLAKELTQKSLPEIGELFGGRDHTTVLHAVRKIGADRSKSPECNHELHVLEQTLKG 464