BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0050.p (438 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775659.1| major facilitator superfamily permease [Herb... 744 0.0 ref|YP_004752181.1| major facilitator superfamily permease [Coll... 706 0.0 ref|YP_003745008.1| transporter major facilitator superfamily mf... 620 e-175 ref|YP_003751776.1| transporter Major facilitator superfamily MF... 619 e-175 emb|CAQ35778.1| permease protein [Ralstonia solanacearum MolK2] 617 e-174 >ref|YP_003775659.1| major facilitator superfamily permease [Herbaspirillum seropedicae SmR1] gb|ADJ63751.1| permease major facilitator superfamily MFS_1 protein [Herbaspirillum seropedicae SmR1] Length = 435 Score = 744 bits (1921), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/421 (85%), Positives = 397/421 (94%) Query: 18 SFEEATFSKVTWRLLPLLFLCYVASYLDRVNVGFAKLQMLQDLKFSETVYGLGAGIFFIG 77 SFE+AT+SKVTWRLLPLLFLCYVASYLDRVNVGFAKLQMLQDLKFS+TVYGLGAGIFF+G Sbjct: 15 SFEDATYSKVTWRLLPLLFLCYVASYLDRVNVGFAKLQMLQDLKFSDTVYGLGAGIFFLG 74 Query: 78 YFIFEVPSNIILHKVGARLWIARIMITWGIISGAMIFVTTPEMFYVMRFLLGVAEAGFFP 137 YF+FEVPSN+ILHKVGARLWIARIMITWGIISGAM +VTTPEMFY+MRFLLGVAEAGFFP Sbjct: 75 YFVFEVPSNMILHKVGARLWIARIMITWGIISGAMAYVTTPEMFYIMRFLLGVAEAGFFP 134 Query: 138 GVILYLTYWYPSHRRGKITALFMTGIAISGVIGGPLSGWIMHAFPGVHGLTGWQWMFIIE 197 GVILYLTYWYP+ RRGKITALFMTGIA+SGVIGGPLSGWIMHA PGV G TGWQWMFI+E Sbjct: 135 GVILYLTYWYPAARRGKITALFMTGIALSGVIGGPLSGWIMHAMPGVWGHTGWQWMFILE 194 Query: 198 AIPSLVLGVVVIFYLKDRIRDADWLSEDEKRLLESQIAQEQSEKAEVSLGQMFADGKVWL 257 AIPSL+LGV+VI Y+KDRIRDADWLSE+EKRLLE+ I+ E+S+K +SLG MFA+G+VWL Sbjct: 195 AIPSLILGVMVILYMKDRIRDADWLSEEEKRLLEANISHEESQKEHLSLGAMFANGRVWL 254 Query: 258 SAIIYFCFVMGLYGVSFWLPTIIKTTGVTDPLNIGLLTAIPYAVAAVAMIMIGRSADQHR 317 A+IYFCFVMGLYGVSFWLPTIIK TGV+DPLN+GLLTAIPYA AA AM++IGRSAD R Sbjct: 255 GALIYFCFVMGLYGVSFWLPTIIKATGVSDPLNVGLLTAIPYAFAAAAMVLIGRSADARR 314 Query: 318 ERRWHVAIPAFLGCVGLLFSTVYDHNTLLAMASLTLAAVGILTTLPLFWSLPTAFLSGAA 377 ERRWHVAIPAF+GC+GLL ST Y HNT LAMASLTLA+VGILTTLPLFWSLPTAFLSG A Sbjct: 315 ERRWHVAIPAFIGCIGLLLSTQYGHNTTLAMASLTLASVGILTTLPLFWSLPTAFLSGTA 374 Query: 378 AAAGIALINSLGNLAGFVSPYLVGWLKDATQSTNTGMYVLAASLLLGGLLTLAVPAKLVN 437 AAAGIALINSLGNLAGFVSP+LVGWLKDATQSTN GMYVLAASL++GGLLTL +PAKLVN Sbjct: 375 AAAGIALINSLGNLAGFVSPFLVGWLKDATQSTNAGMYVLAASLVIGGLLTLTLPAKLVN 434 Query: 438 K 438 + Sbjct: 435 R 435 >ref|YP_004752181.1| major facilitator superfamily permease [Collimonas fungivorans Ter331] gb|AEK61358.1| Permeases of the major facilitator superfamily [Collimonas fungivorans Ter331] Length = 432 Score = 706 bits (1823), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/421 (84%), Positives = 387/421 (91%) Query: 18 SFEEATFSKVTWRLLPLLFLCYVASYLDRVNVGFAKLQMLQDLKFSETVYGLGAGIFFIG 77 +FE AT++KVTWRLLP+LFLCYVASYLDRVNVGFAKLQML DLKFSETVYGLGAGIFFIG Sbjct: 12 AFEAATYAKVTWRLLPMLFLCYVASYLDRVNVGFAKLQMLNDLKFSETVYGLGAGIFFIG 71 Query: 78 YFIFEVPSNIILHKVGARLWIARIMITWGIISGAMIFVTTPEMFYVMRFLLGVAEAGFFP 137 YFIFE+PSN+ILH+VGARLWIARIMITWGI+SGAMIFV +P FYVMRFLLGVAEAGFFP Sbjct: 72 YFIFEIPSNMILHRVGARLWIARIMITWGIVSGAMIFVDSPATFYVMRFLLGVAEAGFFP 131 Query: 138 GVILYLTYWYPSHRRGKITALFMTGIAISGVIGGPLSGWIMHAFPGVHGLTGWQWMFIIE 197 GVILYLTYWYP+HRRGK+TALFMTG+ ISGVIGGPLSGWIM A PGVHGL GWQWMFI+E Sbjct: 132 GVILYLTYWYPAHRRGKMTALFMTGVPISGVIGGPLSGWIMKAMPGVHGLAGWQWMFILE 191 Query: 198 AIPSLVLGVVVIFYLKDRIRDADWLSEDEKRLLESQIAQEQSEKAEVSLGQMFADGKVWL 257 AIPSL+LG+VVIFYL+DRIR A WLSE EK+LLESQI E S+KAE SLGQMFA+ +VWL Sbjct: 192 AIPSLLLGMVVIFYLQDRIRGAAWLSEAEKQLLESQIQAESSQKAEASLGQMFANPRVWL 251 Query: 258 SAIIYFCFVMGLYGVSFWLPTIIKTTGVTDPLNIGLLTAIPYAVAAVAMIMIGRSADQHR 317 A+IYFCFVMGLYGVSFWLPTIIK TGVTD NIGLLTAIPYA AAVAMI+IG SAD+ R Sbjct: 252 MALIYFCFVMGLYGVSFWLPTIIKATGVTDTFNIGLLTAIPYASAAVAMILIGHSADRRR 311 Query: 318 ERRWHVAIPAFLGCVGLLFSTVYDHNTLLAMASLTLAAVGILTTLPLFWSLPTAFLSGAA 377 ERRWHVAIPA LG +GL+ STVYDHNTLLAM++LTLA +GI+T LPLFWSLPTAFL GAA Sbjct: 312 ERRWHVAIPALLGSIGLILSTVYDHNTLLAMSALTLATIGIITVLPLFWSLPTAFLGGAA 371 Query: 378 AAAGIALINSLGNLAGFVSPYLVGWLKDATQSTNTGMYVLAASLLLGGLLTLAVPAKLVN 437 AAAGIALINSLGNLAGFVSPYLVGWLKD TQSTN+GM+VLAASL+LG LLTL+VP LVN Sbjct: 372 AAAGIALINSLGNLAGFVSPYLVGWLKDQTQSTNSGMFVLAASLVLGALLTLSVPKHLVN 431 Query: 438 K 438 K Sbjct: 432 K 432 >ref|YP_003745008.1| transporter major facilitator superfamily mfs [Ralstonia solanacearum CFBP2957] emb|CBJ42378.1| putative transporter, Major facilitator superfamily MFS [Ralstonia solanacearum CFBP2957] Length = 442 Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust. Identities = 301/438 (68%), Positives = 365/438 (83%), Gaps = 3/438 (0%) Query: 4 TPAQGVAAS---PGTDVSFEEATFSKVTWRLLPLLFLCYVASYLDRVNVGFAKLQMLQDL 60 TP G A+ P + FEEAT+ KV+WRL+P L LCYV +YLDRVNVGFAKLQML DL Sbjct: 5 TPPIGPGAATLPPQSASGFEEATYRKVSWRLIPFLLLCYVVAYLDRVNVGFAKLQMLSDL 64 Query: 61 KFSETVYGLGAGIFFIGYFIFEVPSNIILHKVGARLWIARIMITWGIISGAMIFVTTPEM 120 +FSETVYGLGAGIFFIGYF+FEVPSN+ILH+VGAR+WIARIMI+WGI+S AM+FVTTP M Sbjct: 65 RFSETVYGLGAGIFFIGYFLFEVPSNVILHRVGARMWIARIMISWGIVSAAMMFVTTPAM 124 Query: 121 FYVMRFLLGVAEAGFFPGVILYLTYWYPSHRRGKITALFMTGIAISGVIGGPLSGWIMHA 180 FY MRFLLG+AEAGFFPG+ILYLTYWYP+HRRG+ FMT +A+SGVIGGP+SGW + Sbjct: 125 FYAMRFLLGLAEAGFFPGIILYLTYWYPAHRRGRTVTFFMTAVALSGVIGGPVSGWALKT 184 Query: 181 FPGVHGLTGWQWMFIIEAIPSLVLGVVVIFYLKDRIRDADWLSEDEKRLLESQIAQEQSE 240 F GV+GL GWQWMF+IE IPS+V+G+ V+ YL +RIRDA WL+ +EK LL IA E+++ Sbjct: 185 FAGVYGLAGWQWMFVIEGIPSIVIGLCVLAYLDNRIRDAAWLTAEEKALLTRNIAAEEAQ 244 Query: 241 KAEVSLGQMFADGKVWLSAIIYFCFVMGLYGVSFWLPTIIKTTGVTDPLNIGLLTAIPYA 300 K + + + A +VWL ++IYF FVMGLYGVSFWLPT+IK TGV DPL +GLLTAIPY Sbjct: 245 KEDAPIAAVIASPRVWLMSLIYFSFVMGLYGVSFWLPTLIKQTGVADPLAVGLLTAIPYG 304 Query: 301 VAAVAMIMIGRSADQHRERRWHVAIPAFLGCVGLLFSTVYDHNTLLAMASLTLAAVGILT 360 A +AM+++ RSAD+ RERRWH+AIPA G +GL+ S V+ NT LAMA+LTL +GILT Sbjct: 305 AAVIAMVLVARSADRMRERRWHIAIPALAGAIGLVLSAVWHANTALAMAALTLGTMGILT 364 Query: 361 TLPLFWSLPTAFLSGAAAAAGIALINSLGNLAGFVSPYLVGWLKDATQSTNTGMYVLAAS 420 TLPLFWSLPTAFL+G AAAGIALINSLGNLAGF+SPY VGWLKD TQST++GMY+LAAS Sbjct: 365 TLPLFWSLPTAFLAGTGAAAGIALINSLGNLAGFLSPYAVGWLKDTTQSTDSGMYLLAAS 424 Query: 421 LLLGGLLTLAVPAKLVNK 438 +++G LLTL+VPA++VNK Sbjct: 425 MVMGALLTLSVPARMVNK 442 >ref|YP_003751776.1| transporter Major facilitator superfamily MFS [Ralstonia solanacearum PSI07] emb|CBJ50479.1| putative transporter, Major facilitator superfamily MFS [Ralstonia solanacearum PSI07] Length = 442 Score = 619 bits (1597), Expect = e-175, Method: Compositional matrix adjust. Identities = 308/438 (70%), Positives = 371/438 (84%), Gaps = 3/438 (0%) Query: 4 TPAQGVAAS---PGTDVSFEEATFSKVTWRLLPLLFLCYVASYLDRVNVGFAKLQMLQDL 60 TP G A P + SFEEAT+ KV+WRL+P L LCYV +YLDRVNVGFAKLQML DL Sbjct: 5 TPPLGPGAGTLPPQSASSFEEATYRKVSWRLIPFLLLCYVVAYLDRVNVGFAKLQMLNDL 64 Query: 61 KFSETVYGLGAGIFFIGYFIFEVPSNIILHKVGARLWIARIMITWGIISGAMIFVTTPEM 120 KFSETVYGLGAGIFFIGYF+FEVPSN+ILH+VGAR+WIARIMI+WG+IS AM+FVTTP M Sbjct: 65 KFSETVYGLGAGIFFIGYFLFEVPSNVILHRVGARMWIARIMISWGLISAAMMFVTTPAM 124 Query: 121 FYVMRFLLGVAEAGFFPGVILYLTYWYPSHRRGKITALFMTGIAISGVIGGPLSGWIMHA 180 FYVMRFLLG+AEAGFFPG+ILYLTYWYP++RRG+ T FMT +A+SGVIGGP+SGW + A Sbjct: 125 FYVMRFLLGLAEAGFFPGIILYLTYWYPANRRGRTTTFFMTAVALSGVIGGPISGWALKA 184 Query: 181 FPGVHGLTGWQWMFIIEAIPSLVLGVVVIFYLKDRIRDADWLSEDEKRLLESQIAQEQSE 240 F GVHGL GWQWMF+IE IPS+++G+ V+ YL DRIR A WL+++EK LL IA E+++ Sbjct: 185 FAGVHGLAGWQWMFVIEGIPSVIIGLCVLAYLDDRIRHAKWLTDEEKALLARNIAAEEAQ 244 Query: 241 KAEVSLGQMFADGKVWLSAIIYFCFVMGLYGVSFWLPTIIKTTGVTDPLNIGLLTAIPYA 300 K +V + + A +VWL ++IYFCFVMGLYGVSFWLPT+IK TGV DPL++GLLTAIPY Sbjct: 245 KEDVPIATVMASPRVWLMSLIYFCFVMGLYGVSFWLPTLIKQTGVADPLSVGLLTAIPYG 304 Query: 301 VAAVAMIMIGRSADQHRERRWHVAIPAFLGCVGLLFSTVYDHNTLLAMASLTLAAVGILT 360 A VAM+++ RSAD+ RERRWH+AIPA G +GL+ S V+ +T LAMA+LTL +GILT Sbjct: 305 AAVVAMVLVARSADRTRERRWHIAIPAVAGAIGLVLSAVWHTDTTLAMAALTLGTMGILT 364 Query: 361 TLPLFWSLPTAFLSGAAAAAGIALINSLGNLAGFVSPYLVGWLKDATQSTNTGMYVLAAS 420 TLPLFWSLPTAFL+G AAAGIALINSLGNLAGF+SPY VGWLKDATQST++GMY+LAAS Sbjct: 365 TLPLFWSLPTAFLAGTGAAAGIALINSLGNLAGFLSPYAVGWLKDATQSTDSGMYLLAAS 424 Query: 421 LLLGGLLTLAVPAKLVNK 438 ++LG LLTL+VPA+ VN+ Sbjct: 425 MMLGALLTLSVPARTVNR 442 >emb|CAQ35778.1| permease protein [Ralstonia solanacearum MolK2] Length = 442 Score = 617 bits (1590), Expect = e-174, Method: Compositional matrix adjust. Identities = 298/438 (68%), Positives = 365/438 (83%), Gaps = 3/438 (0%) Query: 4 TPAQGVAAS---PGTDVSFEEATFSKVTWRLLPLLFLCYVASYLDRVNVGFAKLQMLQDL 60 TP G A+ P + FE+AT+ KV+WRL+P L LCYV +YLDRVNVGFAKLQML DL Sbjct: 5 TPPIGPGAATLPPQSASGFEQATYRKVSWRLIPFLLLCYVVAYLDRVNVGFAKLQMLSDL 64 Query: 61 KFSETVYGLGAGIFFIGYFIFEVPSNIILHKVGARLWIARIMITWGIISGAMIFVTTPEM 120 KFSETVYGLGAGIFFIGYF+FEVPSN+ILH+VGAR+WIARIMI+WGIIS AM+FVTTP M Sbjct: 65 KFSETVYGLGAGIFFIGYFLFEVPSNVILHRVGARMWIARIMISWGIISAAMMFVTTPAM 124 Query: 121 FYVMRFLLGVAEAGFFPGVILYLTYWYPSHRRGKITALFMTGIAISGVIGGPLSGWIMHA 180 FY MRFLLG+AEAGFFPG+ILYLTYWYP+HRRG+ FMT +A+SGVIGGP+SGW + Sbjct: 125 FYAMRFLLGLAEAGFFPGIILYLTYWYPAHRRGRTITFFMTAVALSGVIGGPISGWALKT 184 Query: 181 FPGVHGLTGWQWMFIIEAIPSLVLGVVVIFYLKDRIRDADWLSEDEKRLLESQIAQEQSE 240 F GV+GL GWQWMF+IE IPS+++G+ V+ YL +RIRDA WL+++EK LL IA E+++ Sbjct: 185 FAGVYGLAGWQWMFVIEGIPSIIIGLCVLAYLDNRIRDATWLTDEEKALLARNIAAEEAQ 244 Query: 241 KAEVSLGQMFADGKVWLSAIIYFCFVMGLYGVSFWLPTIIKTTGVTDPLNIGLLTAIPYA 300 K + + + +VWL ++IYF FVMGLYGVSFWLPT+IK TGV DPL +GLLTA+PY Sbjct: 245 KEDAPIATVMTSPRVWLMSLIYFSFVMGLYGVSFWLPTLIKQTGVADPLAVGLLTAVPYG 304 Query: 301 VAAVAMIMIGRSADQHRERRWHVAIPAFLGCVGLLFSTVYDHNTLLAMASLTLAAVGILT 360 A +AM+++ RSAD+ RERRWH+AIPA G +GL+ S V+ +T LAMA+LTL +GILT Sbjct: 305 AAVIAMVLVARSADRTRERRWHIAIPALAGAIGLVLSAVWHADTALAMAALTLGTMGILT 364 Query: 361 TLPLFWSLPTAFLSGAAAAAGIALINSLGNLAGFVSPYLVGWLKDATQSTNTGMYVLAAS 420 TLPLFWSLPTAFL+G AAAGIALINSLGNLAGF+SPY VGWLKD TQST++GMY+LAAS Sbjct: 365 TLPLFWSLPTAFLAGTGAAAGIALINSLGNLAGFLSPYAVGWLKDTTQSTDSGMYLLAAS 424 Query: 421 LLLGGLLTLAVPAKLVNK 438 +++G LLTL+VPA++VNK Sbjct: 425 MVMGALLTLSVPARMVNK 442