BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0046.p         (132 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003775653.1| peptide methionine sulfoxide reductase [Herb...   245   1e-63
ref|YP_004753050.1| methionine sulfoxide reductase [Collimonas f...   245   2e-63
ref|ZP_08272912.1| Peptide methionine sulfoxide reductase MsrB [...   241   2e-62
ref|YP_001353237.1| peptide methionine sulfoxide reductase [Jant...   236   8e-61
ref|YP_001100017.1| methionine sulfoxide reductase [Herminiimona...   230   5e-59

>ref|YP_003775653.1| peptide methionine sulfoxide reductase [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ63745.1| peptide methionine sulfoxide reductase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 131

 Score =  245 bits (626), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 109/131 (83%), Positives = 122/131 (93%)

Query: 1   MTAKVQKTDAEWRAQLDAMEYQVTRHAATERAFTGKFWDHHEAGIYTCVCCNTPLFASDT 60
           MT +V+KT+A+WR QLD +EYQVTR AATERAFTG++WDHHEAG YTCVCC+TPLF SD 
Sbjct: 1   MTKRVEKTEAQWREQLDPLEYQVTREAATERAFTGRYWDHHEAGTYTCVCCDTPLFTSDA 60

Query: 61  KFDSGCGWPSYFKALDPANVREIVDKSHGMIRTEIVCNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYF+ +DPANVRE VD+S+GMIRTEI+CNVCDAHLGHVFPDGPPPTGLRYC
Sbjct: 61  KFDSGCGWPSYFEPIDPANVREKVDRSYGMIRTEIICNVCDAHLGHVFPDGPPPTGLRYC 120

Query: 121 INSASLRFDPA 131
           INSASLRFDPA
Sbjct: 121 INSASLRFDPA 131


>ref|YP_004753050.1| methionine sulfoxide reductase [Collimonas fungivorans Ter331]
 gb|AEK62227.1| methionine sulfoxide reductase [Collimonas fungivorans Ter331]
          Length = 132

 Score =  245 bits (625), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 110/131 (83%), Positives = 122/131 (93%)

Query: 1   MTAKVQKTDAEWRAQLDAMEYQVTRHAATERAFTGKFWDHHEAGIYTCVCCNTPLFASDT 60
           M++KV KTDAEWR++L+ MEY+VTRHAATERAFTGKFWDHHE G+YTCVCCNTPLF SD 
Sbjct: 1   MSSKVIKTDAEWRSELEPMEYEVTRHAATERAFTGKFWDHHEHGVYTCVCCNTPLFESDA 60

Query: 61  KFDSGCGWPSYFKALDPANVREIVDKSHGMIRTEIVCNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYFKA++P NV E VD+SHGM+RTEI+C VCDAHLGHVFPDGPPPTGLRYC
Sbjct: 61  KFDSGCGWPSYFKAINPDNVEERVDRSHGMMRTEILCKVCDAHLGHVFPDGPPPTGLRYC 120

Query: 121 INSASLRFDPA 131
           INSASLRFDPA
Sbjct: 121 INSASLRFDPA 131


>ref|ZP_08272912.1| Peptide methionine sulfoxide reductase MsrB [Oxalobacteraceae
           bacterium IMCC9480]
 gb|EGF33615.1| Peptide methionine sulfoxide reductase MsrB [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 143

 Score =  241 bits (616), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 110/131 (83%), Positives = 119/131 (90%)

Query: 1   MTAKVQKTDAEWRAQLDAMEYQVTRHAATERAFTGKFWDHHEAGIYTCVCCNTPLFASDT 60
           MT KV KTDAEWRA LD M+Y+VTRHAATERAFTG++WDHHE GIYTCVCCNTPLFASDT
Sbjct: 4   MTNKVTKTDAEWRAALDPMDYEVTRHAATERAFTGRYWDHHEHGIYTCVCCNTPLFASDT 63

Query: 61  KFDSGCGWPSYFKALDPANVREIVDKSHGMIRTEIVCNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYF AL+P NV+E+VD+SHGM RTEI+C VCDAHLGHVFPDGP PTGLRYC
Sbjct: 64  KFDSGCGWPSYFTALNPDNVKELVDRSHGMARTEIICAVCDAHLGHVFPDGPKPTGLRYC 123

Query: 121 INSASLRFDPA 131
           INSASL F PA
Sbjct: 124 INSASLSFAPA 134


>ref|YP_001353237.1| peptide methionine sulfoxide reductase [Janthinobacterium sp.
           Marseille]
 gb|ABR88604.1| peptide methionine sulfoxide reductase [Janthinobacterium sp.
           Marseille]
          Length = 135

 Score =  236 bits (602), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 108/131 (82%), Positives = 118/131 (90%)

Query: 1   MTAKVQKTDAEWRAQLDAMEYQVTRHAATERAFTGKFWDHHEAGIYTCVCCNTPLFASDT 60
           M  KV KTDAEWRA LD  EY VTRHAATE  FTG++WDHHE GIYTCVCCNTPLFASDT
Sbjct: 1   MIDKVIKTDAEWRAMLDDEEYDVTRHAATEAPFTGRYWDHHEFGIYTCVCCNTPLFASDT 60

Query: 61  KFDSGCGWPSYFKALDPANVREIVDKSHGMIRTEIVCNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYFK L+PANV+E +D+++GMIRTE++CNVCDAHLGHVF DGPPPTGLRYC
Sbjct: 61  KFDSGCGWPSYFKPLNPANVKEKIDRAYGMIRTEVICNVCDAHLGHVFNDGPPPTGLRYC 120

Query: 121 INSASLRFDPA 131
           INSASLRFDPA
Sbjct: 121 INSASLRFDPA 131


>ref|YP_001100017.1| methionine sulfoxide reductase [Herminiimonas arsenicoxydans]
 sp|A4G5V5.1|MSRB_HERAR RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName:
           Full=Peptide-methionine (R)-S-oxide reductase
 emb|CAL61892.1| Peptide methionine sulfoxide reductase MsrB (Peptide-methionine
           (R)-S-oxide reductase) [Herminiimonas arsenicoxydans]
          Length = 137

 Score =  230 bits (587), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 104/129 (80%), Positives = 115/129 (89%)

Query: 1   MTAKVQKTDAEWRAQLDAMEYQVTRHAATERAFTGKFWDHHEAGIYTCVCCNTPLFASDT 60
           MT KV KTDAEWRA LD  EY VTRHAATE  F+G++WDHHE GIYTCVCCNTPLFASD 
Sbjct: 1   MTEKVIKTDAEWRAMLDDEEYDVTRHAATEAPFSGRYWDHHEHGIYTCVCCNTPLFASDA 60

Query: 61  KFDSGCGWPSYFKALDPANVREIVDKSHGMIRTEIVCNVCDAHLGHVFPDGPPPTGLRYC 120
           KFDSGCGWPSYF AL+P NV+E +D+++GMIRTE++CNVCDAHLGHVF DGPPPTGLRYC
Sbjct: 61  KFDSGCGWPSYFTALNPDNVKEKIDRAYGMIRTEVICNVCDAHLGHVFNDGPPPTGLRYC 120

Query: 121 INSASLRFD 129
           INSASLRFD
Sbjct: 121 INSASLRFD 129