BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0026.p (258 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003775642.1| glutamine amidotransferase [Herbaspirillum s... 297 1e-78 gb|EFV86492.1| hypothetical protein HMPREF0005_03726 [Achromobac... 270 1e-70 gb|EGP44097.1| glutamine amidotransferase [Achromobacter xylosox... 268 6e-70 ref|YP_003978858.1| glutamine amidotransferase class-I family pr... 259 4e-67 ref|ZP_06687473.1| glutamine amidotransferase [Achromobacter pie... 258 5e-67 >ref|YP_003775642.1| glutamine amidotransferase [Herbaspirillum seropedicae SmR1] gb|ADJ63734.1| glutamine amidotransferase protein [Herbaspirillum seropedicae SmR1] Length = 239 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 143/235 (60%), Positives = 169/235 (71%) Query: 15 APVLIIHTGDPIDELRQSYGSYAVQLQKAAGLADDETEIVSVFQGQFLREPEQYRAVLIT 74 APVLII TGD L+ SYG YA Q+ AAGL E ++V+V++GQ P YRAV IT Sbjct: 3 APVLIIQTGDANPTLKDSYGGYAQQIGCAAGLCQSELQVVTVYEGQRPSCPRSYRAVFIT 62 Query: 75 GSPTMVTDLVDWSERTAAWLRRAAEHGLPMFGVCYGHQLLSHAFGGKVGYNPAGRVAGTM 134 GSP MVTD DWSERTA WLR AAE PMFG+CYGHQLL+HAFGG+VGYNPAGR AGTM Sbjct: 63 GSPAMVTDKEDWSERTAEWLREAAELDTPMFGICYGHQLLTHAFGGEVGYNPAGRAAGTM 122 Query: 135 AVRRHAVAADEHLLQEIPDSFEAHMLHSQVVLEPPPGATVLASSTMDPHHMLRLAPNIFS 194 V+ ++ LL +P F AHMLH Q VL PPP A V+A S MDPHH+++ N++S Sbjct: 123 HVKTLECCREDELLGVLPPEFPAHMLHMQSVLRPPPDAIVMARSPMDPHHVIKHKHNVYS 182 Query: 195 AQFHPEFTGEFVRAHLAYYTEVYGKCGIDTAAMCAQVCETPQSAALLRRFLDLHA 249 QFHPEF+ EFVRAHL YY ++Y CGID A+C +V +TPQS LLRRFL LHA Sbjct: 183 TQFHPEFSPEFVRAHLHYYADIYRGCGIDAQALCEKVSDTPQSTGLLRRFLALHA 237 >gb|EFV86492.1| hypothetical protein HMPREF0005_03726 [Achromobacter xylosoxidans C54] Length = 245 Score = 270 bits (691), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 140/235 (59%), Positives = 165/235 (70%) Query: 16 PVLIIHTGDPIDELRQSYGSYAVQLQKAAGLADDETEIVSVFQGQFLREPEQYRAVLITG 75 PVLI+HTGDP D L+ +G YA QL +A+GLA D+ E+V+V GQ R P+QYRA LITG Sbjct: 10 PVLILHTGDPDDTLKSQFGGYAEQLARASGLAPDDLEVVAVHAGQRPRAPDQYRAALITG 69 Query: 76 SPTMVTDLVDWSERTAAWLRRAAEHGLPMFGVCYGHQLLSHAFGGKVGYNPAGRVAGTMA 135 SP MVTDL WSE TAAWLR AA GLPMFG+CYGHQLL+HA GGKVGYNPAGR GT Sbjct: 70 SPAMVTDLEPWSEDTAAWLREAAAAGLPMFGICYGHQLLAHAMGGKVGYNPAGREVGTQT 129 Query: 136 VRRHAVAADEHLLQEIPDSFEAHMLHSQVVLEPPPGATVLASSTMDPHHMLRLAPNIFSA 195 V AA + LL +P +F A MLH+Q VL+PPPGA VLA S +D H M+R+ NIFS Sbjct: 130 VELLPAAAGDKLLAGLPPTFPAQMLHAQTVLQPPPGAAVLARSDLDAHQMIRIGRNIFST 189 Query: 196 QFHPEFTGEFVRAHLAYYTEVYGKCGIDTAAMCAQVCETPQSAALLRRFLDLHAP 250 QFHPEF +FVRAHL + Y +D + A V TP S L+RRFLD +AP Sbjct: 190 QFHPEFGPDFVRAHLERFGRRYAAENLDVPGLSANVRATPVSGDLVRRFLDAYAP 244 >gb|EGP44097.1| glutamine amidotransferase [Achromobacter xylosoxidans AXX-A] Length = 245 Score = 268 bits (685), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 139/243 (57%), Positives = 168/243 (69%) Query: 8 SASAQSIAPVLIIHTGDPIDELRQSYGSYAVQLQKAAGLADDETEIVSVFQGQFLREPEQ 67 +A+ S PVLI+HTGDP D L+ +G YA QL +A+GL D E+V+V G+ R P+Q Sbjct: 2 TAAISSARPVLILHTGDPDDTLKSQFGGYAEQLARASGLTPDALEVVAVHAGERPRAPDQ 61 Query: 68 YRAVLITGSPTMVTDLVDWSERTAAWLRRAAEHGLPMFGVCYGHQLLSHAFGGKVGYNPA 127 YRA LITGSP MV+DL WSE TAAWLR AA GLPMFG+CYGHQLL+HA GGKVGYNPA Sbjct: 62 YRAALITGSPAMVSDLEPWSEDTAAWLREAAAAGLPMFGICYGHQLLAHALGGKVGYNPA 121 Query: 128 GRVAGTMAVRRHAVAADEHLLQEIPDSFEAHMLHSQVVLEPPPGATVLASSTMDPHHMLR 187 GR GT V AA + LL ++P +F A MLH+Q VL+ PPGA VLA S +DPH M+R Sbjct: 122 GREVGTQTVELLPAAAGDRLLADLPPTFPAQMLHAQTVLQLPPGAAVLARSDLDPHQMIR 181 Query: 188 LAPNIFSAQFHPEFTGEFVRAHLAYYTEVYGKCGIDTAAMCAQVCETPQSAALLRRFLDL 247 + NIFS QFHPEF +FVRAHL + Y +D + A V TP S L+RRFLD Sbjct: 182 IGRNIFSTQFHPEFGPDFVRAHLERFGRRYAAENLDVPGLSANVRATPVSGELVRRFLDA 241 Query: 248 HAP 250 +AP Sbjct: 242 YAP 244 >ref|YP_003978858.1| glutamine amidotransferase class-I family protein 1 [Achromobacter xylosoxidans A8] gb|ADP16143.1| glutamine amidotransferase class-I family protein 1 [Achromobacter xylosoxidans A8] Length = 245 Score = 259 bits (661), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 136/243 (55%), Positives = 166/243 (68%) Query: 8 SASAQSIAPVLIIHTGDPIDELRQSYGSYAVQLQKAAGLADDETEIVSVFQGQFLREPEQ 67 +A+ S PVLI+HTGDP D L+ +G YA QL +AAGL+ + EIV V +G+ + P + Sbjct: 2 TAAIPSALPVLILHTGDPDDTLKSQFGGYAEQLAQAAGLSAEAMEIVPVHEGKRPQAPAR 61 Query: 68 YRAVLITGSPTMVTDLVDWSERTAAWLRRAAEHGLPMFGVCYGHQLLSHAFGGKVGYNPA 127 YRA LITGSP MVTD WSE TAAWLR AA GLPMFGVCYGHQLL++A GGKVGYNPA Sbjct: 62 YRAALITGSPAMVTDKEPWSEDTAAWLREAAAAGLPMFGVCYGHQLLAYALGGKVGYNPA 121 Query: 128 GRVAGTMAVRRHAVAADEHLLQEIPDSFEAHMLHSQVVLEPPPGATVLASSTMDPHHMLR 187 GR GT V AA + LL +P +F A MLH+Q VL+PPPGA VLA S +D H M+R Sbjct: 122 GREVGTQTVELLPPAAGDKLLAGLPPTFPAQMLHAQTVLQPPPGAAVLARSDLDEHQMIR 181 Query: 188 LAPNIFSAQFHPEFTGEFVRAHLAYYTEVYGKCGIDTAAMCAQVCETPQSAALLRRFLDL 247 + N+FS QFHPEF +F+RAHL + Y +D + A V TP + LLRRFLD Sbjct: 182 IGRNVFSTQFHPEFGPDFIRAHLERFGRRYAAENLDVPGLSANVRATPVAGGLLRRFLDA 241 Query: 248 HAP 250 +AP Sbjct: 242 YAP 244 >ref|ZP_06687473.1| glutamine amidotransferase [Achromobacter piechaudii ATCC 43553] gb|EFF75573.1| glutamine amidotransferase [Achromobacter piechaudii ATCC 43553] Length = 245 Score = 258 bits (660), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 135/243 (55%), Positives = 163/243 (67%) Query: 8 SASAQSIAPVLIIHTGDPIDELRQSYGSYAVQLQKAAGLADDETEIVSVFQGQFLREPEQ 67 +A+ + PVLI+HTGDP D L+ +G YA QL +AAGL D IV+V +GQ P Sbjct: 2 TAATSPVLPVLILHTGDPEDTLKSQFGGYAEQLTQAAGLTADAVRIVAVHEGQRPESPAH 61 Query: 68 YRAVLITGSPTMVTDLVDWSERTAAWLRRAAEHGLPMFGVCYGHQLLSHAFGGKVGYNPA 127 YRA LITGSP MVTD WSE TAAWLR AA LPMFGVCYGHQLL+HA GGKVGYNPA Sbjct: 62 YRAALITGSPAMVTDKEPWSEDTAAWLREAAAAQLPMFGVCYGHQLLAHALGGKVGYNPA 121 Query: 128 GRVAGTMAVRRHAVAADEHLLQEIPDSFEAHMLHSQVVLEPPPGATVLASSTMDPHHMLR 187 GR GT V A+ + LL +P +F A MLH+Q VL+PPPG+ VLA S +D H M+R Sbjct: 122 GREVGTQTVELLPPASGDKLLAGLPGTFPAQMLHAQTVLQPPPGSAVLARSDLDEHQMIR 181 Query: 188 LAPNIFSAQFHPEFTGEFVRAHLAYYTEVYGKCGIDTAAMCAQVCETPQSAALLRRFLDL 247 + N+FS QFHPEF +F+RAHL Y+ Y +D + A V TP + LLRRFLD Sbjct: 182 IGRNVFSTQFHPEFGPDFIRAHLDRYSRRYAAENLDIPDLTANVRATPVAGGLLRRFLDT 241 Query: 248 HAP 250 +AP Sbjct: 242 YAP 244