BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0018.p (358 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_997482.1| inner-membrane translocator [Verminephrobacter ... 667 0.0 ref|YP_004753209.1| inner-membrane translocator [Collimonas fung... 663 0.0 ref|YP_001795622.1| branched-chain amino acid ABC transporter pe... 644 0.0 ref|YP_294489.1| inner-membrane translocator [Ralstonia eutropha... 639 0.0 ref|YP_724807.1| ABC transporter permease [Ralstonia eutropha H1... 636 e-180 >ref|YP_997482.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] gb|ABM58464.1| inner-membrane translocator [Verminephrobacter eiseniae EF01-2] Length = 358 Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/358 (93%), Positives = 346/358 (96%) Query: 1 MLYREAGQFKTSYIADSQIFPIRQDRIGMAILLAIAFVGIPLIGSEYWFSAILIPFLVFA 60 MLYREAGQFKTSYIADSQIFPIRQDRIGMA+LL +AFVGIPL+GS YWFSAILIPFLVFA Sbjct: 1 MLYREAGQFKTSYIADSQIFPIRQDRIGMALLLVVAFVGIPLLGSAYWFSAILIPFLVFA 60 Query: 61 LAALGLNILTGYAGQLSLGSAAFMAVGAYAAYNFQLRIEGIPIVLSFILAGGCAALVGIV 120 LAALGLNILTGYAGQLSLGSAAFMAVGAYAAYNFQLRIEGIPI+LSFILAG CAALVG+V Sbjct: 61 LAALGLNILTGYAGQLSLGSAAFMAVGAYAAYNFQLRIEGIPILLSFILAGACAALVGMV 120 Query: 121 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFSWFSNNSSSGVISTQKIDFFGIAINSPVK 180 FGLPSLRIKGFYLAVATLAAQFFVVW LTKF WFSN+SSSGVIS QK+ F G+ INSPV+ Sbjct: 121 FGLPSLRIKGFYLAVATLAAQFFVVWVLTKFPWFSNHSSSGVISAQKVVFLGMDINSPVR 180 Query: 181 KYLFVLGIVCVMAMLAKNLVRSSTGRAWMAVRDMDVAAEVIGIQLMRTKLLAFAVSSFFC 240 KYLFVLGIVCVMA+LAKNLVRSSTGRAWMAVRDMDVAAEVIGIQLMR KLLAFAVSSFFC Sbjct: 181 KYLFVLGIVCVMALLAKNLVRSSTGRAWMAVRDMDVAAEVIGIQLMRAKLLAFAVSSFFC 240 Query: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGAFLGSAFILLLPIFLDNV 300 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGAFLGSAFILLLPI LDNV Sbjct: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGAFLGSAFILLLPILLDNV 300 Query: 301 LPPLASLLHLPFTNATVSHIQLMLFGGLIIFFLIVEPHGLARLWQITKEKLRLWPFPH 358 LPPLA+ LHLPFTNATVSHIQ+MLFGGLIIFFLIVEPHGLARLWQITKEKLRLWPFPH Sbjct: 301 LPPLATFLHLPFTNATVSHIQMMLFGGLIIFFLIVEPHGLARLWQITKEKLRLWPFPH 358 >ref|YP_004753209.1| inner-membrane translocator [Collimonas fungivorans Ter331] gb|AEK62386.1| inner-membrane translocator [Collimonas fungivorans Ter331] Length = 358 Score = 663 bits (1711), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/358 (91%), Positives = 346/358 (96%) Query: 1 MLYREAGQFKTSYIADSQIFPIRQDRIGMAILLAIAFVGIPLIGSEYWFSAILIPFLVFA 60 M YREAGQFKTSY+ADSQIFPIRQDRIGMAILLA+AFVGIPLIGSEYWFSAILIPFLVFA Sbjct: 1 MFYREAGQFKTSYVADSQIFPIRQDRIGMAILLAVAFVGIPLIGSEYWFSAILIPFLVFA 60 Query: 61 LAALGLNILTGYAGQLSLGSAAFMAVGAYAAYNFQLRIEGIPIVLSFILAGGCAALVGIV 120 LAALGLNILTGYAGQLSLGSAAFMAVGAYAAYNFQLR+EGIPI+LSFILAG CAA VG++ Sbjct: 61 LAALGLNILTGYAGQLSLGSAAFMAVGAYAAYNFQLRVEGIPILLSFILAGCCAAAVGVL 120 Query: 121 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFSWFSNNSSSGVISTQKIDFFGIAINSPVK 180 FGLPSLRIKGFYLAVATLAAQFFV+W LTKF WFSN+SSSGVIS QKI+ FGIAINSPV+ Sbjct: 121 FGLPSLRIKGFYLAVATLAAQFFVIWVLTKFPWFSNDSSSGVISAQKINLFGIAINSPVR 180 Query: 181 KYLFVLGIVCVMAMLAKNLVRSSTGRAWMAVRDMDVAAEVIGIQLMRTKLLAFAVSSFFC 240 KYLFVL +VC MA+LAKNLVRSSTGRAWMAVRDMDVAAEVIGI+LM+TKLLAFAVSSFFC Sbjct: 181 KYLFVLAVVCAMALLAKNLVRSSTGRAWMAVRDMDVAAEVIGIRLMQTKLLAFAVSSFFC 240 Query: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGAFLGSAFILLLPIFLDNV 300 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMII+GGVGSILGAFLGSAFILLLPIFLDNV Sbjct: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIVGGVGSILGAFLGSAFILLLPIFLDNV 300 Query: 301 LPPLASLLHLPFTNATVSHIQLMLFGGLIIFFLIVEPHGLARLWQITKEKLRLWPFPH 358 LPPLA+ LHLPFTNATVSHIQ+MLFG LIIFFLI EPHGLARLWQITKEKLRLWPFPH Sbjct: 301 LPPLATWLHLPFTNATVSHIQMMLFGALIIFFLIAEPHGLARLWQITKEKLRLWPFPH 358 >ref|YP_001795622.1| branched-chain amino acid ABC transporter permease [Cupriavidus taiwanensis LMG 19424] emb|CAP62900.1| putative branched-chain amino acid transport system permease, membrane component [Cupriavidus taiwanensis LMG 19424] Length = 358 Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/358 (87%), Positives = 342/358 (95%) Query: 1 MLYREAGQFKTSYIADSQIFPIRQDRIGMAILLAIAFVGIPLIGSEYWFSAILIPFLVFA 60 M YREAGQFKTSY+ADSQIFPIRQDRIG A+L+A+AFV IP +GSEYWFSAILIPFL+F+ Sbjct: 1 MFYREAGQFKTSYVADSQIFPIRQDRIGFAVLMAVAFVAIPFVGSEYWFSAILIPFLIFS 60 Query: 61 LAALGLNILTGYAGQLSLGSAAFMAVGAYAAYNFQLRIEGIPIVLSFILAGGCAALVGIV 120 LAALGLNILTGYAGQLSLG+AAFMAVGAYAAYNFQLRIEG+P++L+FILAG AALVG+ Sbjct: 61 LAALGLNILTGYAGQLSLGTAAFMAVGAYAAYNFQLRIEGMPVLLTFILAGLSAALVGVA 120 Query: 121 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFSWFSNNSSSGVISTQKIDFFGIAINSPVK 180 FGLPSLRIKGFYLAVATLAAQFFVVWALTKF WFSNNSSSGVI+ Q++D FG AI++PVK Sbjct: 121 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVITAQRLDLFGYAIDTPVK 180 Query: 181 KYLFVLGIVCVMAMLAKNLVRSSTGRAWMAVRDMDVAAEVIGIQLMRTKLLAFAVSSFFC 240 KYLFVL IV V+A+ AKNLVRS+TGRAWM+VRDMDVAAEVIGI LMRTKLLAFAVSSF+C Sbjct: 181 KYLFVLAIVTVLALAAKNLVRSATGRAWMSVRDMDVAAEVIGIPLMRTKLLAFAVSSFYC 240 Query: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGAFLGSAFILLLPIFLDNV 300 GVAGALYAFCYLGSVEPDGFSLDLSFR+LFMIIIGGVGSILG+FLG+AFILLLPIFLDNV Sbjct: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRVLFMIIIGGVGSILGSFLGAAFILLLPIFLDNV 300 Query: 301 LPPLASLLHLPFTNATVSHIQLMLFGGLIIFFLIVEPHGLARLWQITKEKLRLWPFPH 358 LPPLASLLHLPFTNATVSHIQLM+FGGLIIFFLIVEPHGLARLWQI KEKLRLWPFPH Sbjct: 301 LPPLASLLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARLWQIAKEKLRLWPFPH 358 >ref|YP_294489.1| inner-membrane translocator [Ralstonia eutropha JMP134] gb|AAZ59645.1| amino acid/amide ABC transporter membrane protein 2, HAAT family [Ralstonia eutropha JMP134] Length = 358 Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/358 (87%), Positives = 343/358 (95%) Query: 1 MLYREAGQFKTSYIADSQIFPIRQDRIGMAILLAIAFVGIPLIGSEYWFSAILIPFLVFA 60 M YREAGQFKTSY++DSQIFPIRQDRIG A+L+A+AF IP +GSEYWFSAILIPFL+F+ Sbjct: 1 MFYREAGQFKTSYVSDSQIFPIRQDRIGFAVLMAVAFGVIPFVGSEYWFSAILIPFLIFS 60 Query: 61 LAALGLNILTGYAGQLSLGSAAFMAVGAYAAYNFQLRIEGIPIVLSFILAGGCAALVGIV 120 LAALGLNILTGYAGQLSLG+AAFMAVGAYAAYNFQLRIEG+P++L+FILAG AA+VG+ Sbjct: 61 LAALGLNILTGYAGQLSLGTAAFMAVGAYAAYNFQLRIEGMPVLLTFILAGLSAAVVGVA 120 Query: 121 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFSWFSNNSSSGVISTQKIDFFGIAINSPVK 180 FGLPSLRIKGFYLAVATLAAQFFVVWALTKF WFSNNSSSGVI+ Q++D FGIAI++PVK Sbjct: 121 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVITAQRLDLFGIAIDTPVK 180 Query: 181 KYLFVLGIVCVMAMLAKNLVRSSTGRAWMAVRDMDVAAEVIGIQLMRTKLLAFAVSSFFC 240 KYLFVL +V V+A +AKNLVRS+TGRAWM+VRDMDVAAEVIGI LMRTKLLAFAVSSF+C Sbjct: 181 KYLFVLALVTVLAFIAKNLVRSATGRAWMSVRDMDVAAEVIGIPLMRTKLLAFAVSSFYC 240 Query: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGAFLGSAFILLLPIFLDNV 300 GVAGALYAFCYLGSVEPDGFSLDLSFR+LFMIIIGGVGSILG+FLG+AFILLLPIFLDNV Sbjct: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRVLFMIIIGGVGSILGSFLGAAFILLLPIFLDNV 300 Query: 301 LPPLASLLHLPFTNATVSHIQLMLFGGLIIFFLIVEPHGLARLWQITKEKLRLWPFPH 358 LPPLASLLHLPFTNATVSHIQLM+FGGLIIFFLIVEPHGLARLWQI+KEKLRLWPFPH Sbjct: 301 LPPLASLLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARLWQISKEKLRLWPFPH 358 >ref|YP_724807.1| ABC transporter permease [Ralstonia eutropha H16] emb|CAJ91439.1| ABC-type transporter, permease component: HAAT family [Ralstonia eutropha H16] Length = 358 Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust. Identities = 309/358 (86%), Positives = 341/358 (95%) Query: 1 MLYREAGQFKTSYIADSQIFPIRQDRIGMAILLAIAFVGIPLIGSEYWFSAILIPFLVFA 60 M YREAGQFKTSY+ADSQIFPIRQDRIG A+L+A+AFV IP +GSEYWFSAILIPFL+F+ Sbjct: 1 MFYREAGQFKTSYVADSQIFPIRQDRIGFAVLMAVAFVAIPFVGSEYWFSAILIPFLIFS 60 Query: 61 LAALGLNILTGYAGQLSLGSAAFMAVGAYAAYNFQLRIEGIPIVLSFILAGGCAALVGIV 120 LAALGLNILTGYAGQLSLG+AAFMAVGAYAAYNFQLR+EG+P++L+F++AG AALVG+ Sbjct: 61 LAALGLNILTGYAGQLSLGTAAFMAVGAYAAYNFQLRVEGMPVLLTFVMAGLSAALVGVA 120 Query: 121 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFSWFSNNSSSGVISTQKIDFFGIAINSPVK 180 FGLPSLRIKGFYLAVATLAAQFFVVWALTKF WFSNNSSSGVI+ Q++D FG AI++P+K Sbjct: 121 FGLPSLRIKGFYLAVATLAAQFFVVWALTKFPWFSNNSSSGVITAQRLDLFGFAIDTPLK 180 Query: 181 KYLFVLGIVCVMAMLAKNLVRSSTGRAWMAVRDMDVAAEVIGIQLMRTKLLAFAVSSFFC 240 KYLFVL IV V+A+ AKNLVRS+TGRAWM+VRDMDVAAEVIGI LMRTKLLAFAVSSF+C Sbjct: 181 KYLFVLAIVTVLALAAKNLVRSATGRAWMSVRDMDVAAEVIGIPLMRTKLLAFAVSSFYC 240 Query: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRILFMIIIGGVGSILGAFLGSAFILLLPIFLDNV 300 GVAGALYAFCYLGSVEPDGFSLDLSFR+LFMIIIGGVGSILG+FLG+AFILLLPIFLDNV Sbjct: 241 GVAGALYAFCYLGSVEPDGFSLDLSFRVLFMIIIGGVGSILGSFLGAAFILLLPIFLDNV 300 Query: 301 LPPLASLLHLPFTNATVSHIQLMLFGGLIIFFLIVEPHGLARLWQITKEKLRLWPFPH 358 LP LA+LLHLPFTNATVSHIQLM+FGGLIIFFLIVEPHGLARLWQI KEKLRLWPFPH Sbjct: 301 LPSLAALLHLPFTNATVSHIQLMVFGGLIIFFLIVEPHGLARLWQIAKEKLRLWPFPH 358