BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0002.p         (241 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003777254.1| hypothetical protein Hsero_3868 [Herbaspiril...   332   3e-89
ref|ZP_02464273.1| hypothetical protein Bpse38_12960 [Burkholder...   234   7e-60
ref|ZP_02403837.1| hypothetical protein BpseD_16452 [Burkholderi...   234   1e-59
ref|ZP_02373985.1| hypothetical protein BthaT_23392 [Burkholderi...   233   3e-59
ref|ZP_04952112.1| conserved hypothetical protein [Burkholderia ...   231   5e-59

>ref|YP_003777254.1| hypothetical protein Hsero_3868 [Herbaspirillum seropedicae SmR1]
 gb|ADJ65346.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 239

 Score =  332 bits (851), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 157/239 (65%), Positives = 195/239 (81%)

Query: 1   MKKLNLNLKDEVYDSLDRDYKNFNRLSLKCDSGFVSPSFESFMLAKLSDNTTFLTEAAVQ 60
           MK++ L LKDE+YDSL+RDY+NF R S K DSGFV PSF++++LAKLS+N+ FLTE AVQ
Sbjct: 1   MKQIKLILKDEIYDSLERDYQNFVRFSTKIDSGFVKPSFDNYLLAKLSENSNFLTEEAVQ 60

Query: 61  HLMLSGQYAWAKRALDKDFPDVVAILISQASNYGFHIAVRHDWSVDELTAASKAWATSIV 120
           HLMLSGQYAWA+RA+DKDFPDVV ILI QA+NYGF IAVRHDW  DEL AASKAWA +I+
Sbjct: 61  HLMLSGQYAWARRAMDKDFPDVVQILIEQAANYGFWIAVRHDWGTDELVAASKAWAMAII 120

Query: 121 KQAKGDESQIDVLAAQIKSAAISIAKAEEALKTPAWRLSRSWAQQLHDAKIAVEHARGSV 180
           KQAKGDESQ+DVLAAQIK++A SIA  +E LKTPA +L+ +  Q+L +  IA+EHA G V
Sbjct: 121 KQAKGDESQVDVLAAQIKASATSIAVVQERLKTPASQLAHAMVQELRETHIAIEHASGMV 180

Query: 181 AREKLGSLRTLLTLGIAYGTVKEKDEKEILDRLRTRKPYLFEEEADGFLGRALAWYRSV 239
           AREKLG++RTLL LG AYG V EK E++++++L+  KP+LF+E   GF G   AW+R V
Sbjct: 181 AREKLGAMRTLLKLGRAYGNVSEKAEQDMMEKLKREKPWLFDEGPKGFWGHVAAWWRGV 239


>ref|ZP_02464273.1| hypothetical protein Bpse38_12960 [Burkholderia thailandensis
           MSMB43]
          Length = 261

 Score =  234 bits (597), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 127/240 (52%), Positives = 167/240 (69%)

Query: 1   MKKLNLNLKDEVYDSLDRDYKNFNRLSLKCDSGFVSPSFESFMLAKLSDNTTFLTEAAVQ 60
           M ++ L LKD+   SL +DY  F R+SLK D  FV+PSFE F+ AKL D+   LTE AVQ
Sbjct: 1   MGQITLTLKDDTVVSLRKDYDAFVRVSLKLDPQFVTPSFEDFLRAKLLDSMVPLTEHAVQ 60

Query: 61  HLMLSGQYAWAKRALDKDFPDVVAILISQASNYGFHIAVRHDWSVDELTAASKAWATSIV 120
            L+  GQYAWAKR LDK+FPDVV+ILI QA  +GF  A R +W+ DEL  A + WA +IV
Sbjct: 61  RLLQGGQYAWAKRTLDKEFPDVVSILIRQAGEFGFGFASRSEWTPDELAKACRDWAAAIV 120

Query: 121 KQAKGDESQIDVLAAQIKSAAISIAKAEEALKTPAWRLSRSWAQQLHDAKIAVEHARGSV 180
             A+GD + +D LAAQIKSA   I   EE ++TPAWRL+ S  Q++++AK+A E + GSV
Sbjct: 121 SGAQGDAALVDPLAAQIKSAVTDIQTLEERMQTPAWRLAESLRQRVYEAKLACEMSVGSV 180

Query: 181 AREKLGSLRTLLTLGIAYGTVKEKDEKEILDRLRTRKPYLFEEEADGFLGRALAWYRSVF 240
           AREKLG LR LL LGI++G+ ++++ ++I++ LR  KP +F EE      RA AW RSVF
Sbjct: 181 AREKLGELRGLLRLGISHGSFQKQEAQQIMEYLRLLKPEIFVEEPYDIFARAAAWLRSVF 240


>ref|ZP_02403837.1| hypothetical protein BpseD_16452 [Burkholderia pseudomallei DM98]
          Length = 262

 Score =  234 bits (596), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/240 (52%), Positives = 167/240 (69%)

Query: 1   MKKLNLNLKDEVYDSLDRDYKNFNRLSLKCDSGFVSPSFESFMLAKLSDNTTFLTEAAVQ 60
           M ++ L LKD+   SL +DY  F R+SLK D  FV+PSFE F+ AKL DN   LTE AVQ
Sbjct: 1   MGQITLTLKDDTVVSLRKDYDAFVRVSLKLDPQFVTPSFEDFLRAKLLDNMVPLTEHAVQ 60

Query: 61  HLMLSGQYAWAKRALDKDFPDVVAILISQASNYGFHIAVRHDWSVDELTAASKAWATSIV 120
            L+  GQYAWAKR LDK+FPDVV+ILI QA ++GF  A R +W+ DEL  A + WA ++V
Sbjct: 61  RLLQGGQYAWAKRTLDKEFPDVVSILIRQAGDFGFGFASRSEWTPDELAKACRDWAAAVV 120

Query: 121 KQAKGDESQIDVLAAQIKSAAISIAKAEEALKTPAWRLSRSWAQQLHDAKIAVEHARGSV 180
             A+GD + +D LAAQIKSA   I   EE ++TPAWRL+ S  Q++++AK+A E + GSV
Sbjct: 121 SGAQGDAALVDPLAAQIKSAVTDIQTLEERMQTPAWRLAESLRQRVYEAKLACEMSVGSV 180

Query: 181 AREKLGSLRTLLTLGIAYGTVKEKDEKEILDRLRTRKPYLFEEEADGFLGRALAWYRSVF 240
           AREKLG LR LL LGIA+G+ ++++ ++I++ LR  KP +F EE      R  AW RS+F
Sbjct: 181 AREKLGELRGLLRLGIAHGSFQKQEAQQIMEYLRLLKPEIFIEEPYDIFTRIAAWLRSMF 240


>ref|ZP_02373985.1| hypothetical protein BthaT_23392 [Burkholderia thailandensis TXDOH]
          Length = 262

 Score =  233 bits (593), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 126/240 (52%), Positives = 167/240 (69%)

Query: 1   MKKLNLNLKDEVYDSLDRDYKNFNRLSLKCDSGFVSPSFESFMLAKLSDNTTFLTEAAVQ 60
           M ++ L LKD+   SL +DY  F R+SLK D  FV+PSFE F+ AKL D+   LTE AVQ
Sbjct: 1   MGQITLTLKDDTVVSLRKDYDAFVRVSLKLDPQFVTPSFEDFLRAKLLDSMVPLTEHAVQ 60

Query: 61  HLMLSGQYAWAKRALDKDFPDVVAILISQASNYGFHIAVRHDWSVDELTAASKAWATSIV 120
            L+  GQYAWAKR LDK+FPDVVAILI QA ++GF  A R +W+ DEL  A + WA ++V
Sbjct: 61  RLLQGGQYAWAKRTLDKEFPDVVAILIRQAGDFGFGFASRSEWTPDELAKACRDWAAAVV 120

Query: 121 KQAKGDESQIDVLAAQIKSAAISIAKAEEALKTPAWRLSRSWAQQLHDAKIAVEHARGSV 180
             A+GD + +D LAAQIKSA   I   EE ++TPAWRL+ S  Q++++AK+A E + GSV
Sbjct: 121 SGAQGDAALVDPLAAQIKSAVTDIQTLEERMQTPAWRLAESLRQRVYEAKLACEMSVGSV 180

Query: 181 AREKLGSLRTLLTLGIAYGTVKEKDEKEILDRLRTRKPYLFEEEADGFLGRALAWYRSVF 240
           AREKLG LR LL LGIA+G+ ++++ ++I++ LR  KP +F EE      R  AW RS+F
Sbjct: 181 AREKLGELRGLLRLGIAHGSFQKQEAQQIMEYLRLLKPEIFIEEPYDVFTRIAAWLRSMF 240


>ref|ZP_04952112.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
 gb|EET09131.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
          Length = 399

 Score =  231 bits (590), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 125/240 (52%), Positives = 167/240 (69%)

Query: 1   MKKLNLNLKDEVYDSLDRDYKNFNRLSLKCDSGFVSPSFESFMLAKLSDNTTFLTEAAVQ 60
           M ++ L LKD+   SL +DY  F R+SLK D  FV+PSFE F+ AKL D+   LTE AVQ
Sbjct: 138 MGQITLTLKDDTVVSLRKDYDAFVRVSLKLDPQFVTPSFEDFLRAKLLDSMVPLTEHAVQ 197

Query: 61  HLMLSGQYAWAKRALDKDFPDVVAILISQASNYGFHIAVRHDWSVDELTAASKAWATSIV 120
            L+  GQYAWAKR LDK+FPDVV+ILI QA ++GF  A R +W+ DEL  A + WA ++V
Sbjct: 198 RLLQGGQYAWAKRTLDKEFPDVVSILIRQAGDFGFGFASRSEWTPDELAKACRDWAAAVV 257

Query: 121 KQAKGDESQIDVLAAQIKSAAISIAKAEEALKTPAWRLSRSWAQQLHDAKIAVEHARGSV 180
             A+GD + +D LAAQIKSA   I   EE ++TPAWRL+ S  Q++++AK+A E + GSV
Sbjct: 258 SGAQGDAALVDPLAAQIKSAVTDIQTLEERMQTPAWRLAESLRQRVYEAKLACEMSVGSV 317

Query: 181 AREKLGSLRTLLTLGIAYGTVKEKDEKEILDRLRTRKPYLFEEEADGFLGRALAWYRSVF 240
           AREKLG LR LL LGIA+G+ ++++ ++I++ LR  KP +F EE      R  AW RS+F
Sbjct: 318 AREKLGELRGLLRLGIAHGSFQKQEAQQIMEYLRLLKPEIFIEEPYDIFTRIAAWLRSMF 377