BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0102.p (153 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001351707.1| CheW purine-binding chemotaxis protein [Jant... 206 7e-52 ref|YP_346785.1| CheW protein [Pseudomonas fluorescens Pf0-1] >g... 159 2e-37 ref|YP_002870875.1| putative chemotaxis-like protein [Pseudomona... 158 2e-37 ref|ZP_07773857.1| purine-binding chemotaxis protein CheW [Pseud... 157 4e-37 ref|YP_004753018.1| chemotaxis signal transduction protein [Coll... 157 6e-37 >ref|YP_001351707.1| CheW purine-binding chemotaxis protein [Janthinobacterium sp. Marseille] gb|ABR90412.1| CheW purine-binding chemotaxis protein [Janthinobacterium sp. Marseille] Length = 161 Score = 206 bits (525), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 99/149 (66%), Positives = 124/149 (83%) Query: 1 MLFLIFQIGNERYALDAAQVAVVLPPAPCKQVPEAPPWVRGIFSHEGSNVPVLDVSMLAL 60 MLFL+FQIG +RYAL+AAQVA+VLP A K+VP P WV G+F+++G +VPVLDVS+LA Sbjct: 9 MLFLLFQIGRDRYALEAAQVALVLPLARLKEVPGTPAWVLGLFNYDGQHVPVLDVSLLAT 68 Query: 61 GTPAAARLSTRMVLVRYTPEGKTPQLLGLIVERATDTLRCEAADFTGSGLAHDNARYLGP 120 G AA+RLSTR+VLV YTP G+ PQLLGL+VE+ATDTLRC+ A+F+ SGL++ +ARYLGP Sbjct: 69 GQAAASRLSTRLVLVHYTPAGQAPQLLGLVVEKATDTLRCDPANFSDSGLSNQDARYLGP 128 Query: 121 VMRHGDSLIQWVKVADMLDAEVQALLFPE 149 V+R D LIQ + V D+LDA VQALLFPE Sbjct: 129 VLRRDDGLIQRINVQDLLDASVQALLFPE 157 >ref|YP_346785.1| CheW protein [Pseudomonas fluorescens Pf0-1] gb|ABA72796.1| putative chemotaxis-related protein [Pseudomonas fluorescens Pf0-1] Length = 178 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 81/148 (54%), Positives = 101/148 (68%), Gaps = 1/148 (0%) Query: 2 LFLIFQIGNERYALDAAQVAVVLPPAPCKQVPEAPPWVRGIFSHEGSNVPVLDVSMLALG 61 LFL+F+IG+ERYAL A +VA VLP P K + AP WV G+F++ G+ VPV+D+S L G Sbjct: 18 LFLLFRIGSERYALRATEVAEVLPRLPLKPIARAPHWVAGVFAYRGTVVPVIDLSALTFG 77 Query: 62 TPAAARLSTRMVLVRYTPEGKTP-QLLGLIVERATDTLRCEAADFTGSGLAHDNARYLGP 120 PA AR STR+VLV Y E P Q LGLI+E+ATDTLRC +F GL + A YLGP Sbjct: 78 HPAQARTSTRLVLVHYRAEDSQPAQWLGLILEQATDTLRCNPDEFQSYGLDNRQAPYLGP 137 Query: 121 VMRHGDSLIQWVKVADMLDAEVQALLFP 148 V L+QWV+V D+LD V+ LLFP Sbjct: 138 VREDAQGLVQWVRVNDLLDESVRTLLFP 165 >ref|YP_002870875.1| putative chemotaxis-like protein [Pseudomonas fluorescens SBW25] gb|AAO92334.1| WspB [Pseudomonas fluorescens] emb|CAY47479.1| putative chemotaxis-related protein [Pseudomonas fluorescens SBW25] Length = 170 Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 82/150 (54%), Positives = 103/150 (68%), Gaps = 1/150 (0%) Query: 2 LFLIFQIGNERYALDAAQVAVVLPPAPCKQVPEAPPWVRGIFSHEGSNVPVLDVSMLALG 61 LFL+F IG ERYAL A +VA VLP P K + AP WV GIF+H G+ VPV+D+S L G Sbjct: 18 LFLVFHIGQERYALKATEVAEVLPRLPLKPIAHAPLWVAGIFAHRGALVPVIDLSALTFG 77 Query: 62 TPAAARLSTRMVLVRYTPE-GKTPQLLGLIVERATDTLRCEAADFTGSGLAHDNARYLGP 120 PA AR STR+VLV Y P+ G + LGLI+E+ATDTLRC+ A+F GLA+ A YLGP Sbjct: 78 NPAQARTSTRLVLVNYQPDAGSQARWLGLILEQATDTLRCDPAEFQPYGLANRQAPYLGP 137 Query: 121 VMRHGDSLIQWVKVADMLDAEVQALLFPEE 150 V L+QW+ V D+L +V+A+LF E Sbjct: 138 VREDALGLMQWIGVNDLLTDDVRAVLFSAE 167 >ref|ZP_07773857.1| purine-binding chemotaxis protein CheW [Pseudomonas fluorescens WH6] gb|EFQ64621.1| purine-binding chemotaxis protein CheW [Pseudomonas fluorescens WH6] Length = 170 Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 83/150 (55%), Positives = 102/150 (68%), Gaps = 1/150 (0%) Query: 2 LFLIFQIGNERYALDAAQVAVVLPPAPCKQVPEAPPWVRGIFSHEGSNVPVLDVSMLALG 61 LFL+F IG+ERYAL A +VA VLP P K + AP WV GIF+H G+ VPV+D+S L G Sbjct: 18 LFLVFHIGSERYALKATEVAEVLPRLPLKPIAHAPLWVAGIFAHRGALVPVIDLSALTFG 77 Query: 62 TPAAARLSTRMVLVRYTPE-GKTPQLLGLIVERATDTLRCEAADFTGSGLAHDNARYLGP 120 TPA AR STR+VLV Y P+ P+ LGLI+E+ATDTLRCE F GL + A YLGP Sbjct: 78 TPAQARTSTRLVLVNYQPQPWVAPRSLGLILEQATDTLRCEPGQFQPYGLDNRQAPYLGP 137 Query: 121 VMRHGDSLIQWVKVADMLDAEVQALLFPEE 150 V L+QW+ V D+L +V+ALLF E Sbjct: 138 VREDALGLMQWIGVNDLLTDDVRALLFSAE 167 >ref|YP_004753018.1| chemotaxis signal transduction protein [Collimonas fungivorans Ter331] gb|AEK62195.1| Chemotaxis signal transduction protein [Collimonas fungivorans Ter331] Length = 152 Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 80/148 (54%), Positives = 104/148 (70%) Query: 1 MLFLIFQIGNERYALDAAQVAVVLPPAPCKQVPEAPPWVRGIFSHEGSNVPVLDVSMLAL 60 MLFL+FQIG + YALD QVAVVL A KQ+P + PWV G+F++ G +VPV+D+S LAL Sbjct: 1 MLFLLFQIGQDHYALDTRQVAVVLSLANLKQIPASAPWVAGVFTYRGQSVPVIDLSQLAL 60 Query: 61 GTPAAARLSTRMVLVRYTPEGKTPQLLGLIVERATDTLRCEAADFTGSGLAHDNARYLGP 120 G PA RLSTRMVLV Y G +LLGL++E++++ +R E ++F SGL H +A YLG Sbjct: 61 GRPAQRRLSTRMVLVHYPTPGPDSRLLGLVLEKSSEIMRREPSEFRDSGLDHSDAPYLGQ 120 Query: 121 VMRHGDSLIQWVKVADMLDAEVQALLFP 148 V LIQ V+V D+L EV+A LFP Sbjct: 121 VTDDARGLIQSVQVQDLLPPEVRAQLFP 148