BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0101.p         (201 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001351708.1| methyl-accepting chemotaxis protein [Janthin...   384   e-105
ref|YP_003776418.1| methyl-accepting chemotaxis protein [Herbasp...   362   2e-98
ref|YP_586110.1| methyl-accepting chemotaxis sensory transducer ...   337   6e-91
ref|YP_002008403.1| methyl-accepting chemotaxis sensory transduc...   337   6e-91
ref|YP_004753017.1| methyl-accepting chemotaxis sensory transduc...   335   2e-90

>ref|YP_001351708.1| methyl-accepting chemotaxis protein [Janthinobacterium sp.
           Marseille]
 gb|ABR90026.1| methyl-accepting chemotaxis protein [Janthinobacterium sp.
           Marseille]
          Length = 542

 Score =  384 bits (986), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 195/201 (97%), Positives = 199/201 (99%)

Query: 1   MEDTMQDVMEAAGSVSGKLAILNEKAGNINQVVTTITKVADQTNLLSLNAAIEAEKAGEY 60
           MEDTMQ VM+AAGSVSGKLAILNEKAGNINQVVTTITKVADQTNLLSLNAAIEAEKAGEY
Sbjct: 342 MEDTMQAVMDAAGSVSGKLAILNEKAGNINQVVTTITKVADQTNLLSLNAAIEAEKAGEY 401

Query: 61  GRGFSVVATEIRRLADQTAVATYDIELMVKEIQSAVAAGVMGMDKFSDQVRRGMAEVQQV 120
           GRGFSVVATEIRRLADQTAVATYDIELMVKEIQSAVAAGVMGMDKFSDQVRRGM EVQQV
Sbjct: 402 GRGFSVVATEIRRLADQTAVATYDIELMVKEIQSAVAAGVMGMDKFSDQVRRGMQEVQQV 461

Query: 121 GTQLSQIIAQVQALAPRFQVVNEGMQAQANSAEQINQALLQLSEAAQQTVESLQQSSQAI 180
           G+QLSQIIAQVQALAPRFQVVNEGMQAQANSAEQINQAL+QLSEAAQQTVESLQQSSQAI
Sbjct: 462 GSQLSQIIAQVQALAPRFQVVNEGMQAQANSAEQINQALVQLSEAAQQTVESLQQSSQAI 521

Query: 181 DELNLVSNGLRNGVSRFKVSA 201
           DEL+LVSNGLRNGVSRFKVSA
Sbjct: 522 DELHLVSNGLRNGVSRFKVSA 542


>ref|YP_003776418.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae
           SmR1]
 gb|ADJ64510.1| methyl-accepting chemotaxis protein [Herbaspirillum seropedicae
           SmR1]
          Length = 541

 Score =  362 bits (928), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 183/199 (91%), Positives = 194/199 (97%)

Query: 1   MEDTMQDVMEAAGSVSGKLAILNEKAGNINQVVTTITKVADQTNLLSLNAAIEAEKAGEY 60
           MEDTMQ+VM+AAGSVS KLAILNEKAGNINQVVTTITKVADQTNLLSLNAAIEAEKAGE+
Sbjct: 341 MEDTMQNVMDAAGSVSAKLAILNEKAGNINQVVTTITKVADQTNLLSLNAAIEAEKAGEH 400

Query: 61  GRGFSVVATEIRRLADQTAVATYDIELMVKEIQSAVAAGVMGMDKFSDQVRRGMAEVQQV 120
           GRGFSVVATEIRRLADQTAVATYDIE+MVKEIQSAVAAGVMGMDKFSDQVRRGM +VQ  
Sbjct: 401 GRGFSVVATEIRRLADQTAVATYDIEVMVKEIQSAVAAGVMGMDKFSDQVRRGMQDVQTA 460

Query: 121 GTQLSQIIAQVQALAPRFQVVNEGMQAQANSAEQINQALLQLSEAAQQTVESLQQSSQAI 180
           G+QLSQIIAQVQALAPRFQ+VNEGMQAQANSAEQINQAL+QLSEAAQQTVESLQQSSQAI
Sbjct: 461 GSQLSQIIAQVQALAPRFQIVNEGMQAQANSAEQINQALVQLSEAAQQTVESLQQSSQAI 520

Query: 181 DELNLVSNGLRNGVSRFKV 199
           +EL++VSN LRNGVSRFKV
Sbjct: 521 EELHVVSNELRNGVSRFKV 539


>ref|YP_586110.1| methyl-accepting chemotaxis sensory transducer [Cupriavidus
           metallidurans CH34]
 gb|ABF10841.1| putative methyl-accepting chemotaxis sensory transducer
           [Cupriavidus metallidurans CH34]
          Length = 606

 Score =  337 bits (864), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 171/199 (85%), Positives = 184/199 (92%)

Query: 1   MEDTMQDVMEAAGSVSGKLAILNEKAGNINQVVTTITKVADQTNLLSLNAAIEAEKAGEY 60
           ME TM  VMEAAGSV+ +LA LNEKAGNINQVVTTI +VADQTNLLSLNAAIEAEKAGEY
Sbjct: 408 MEATMNHVMEAAGSVNARLATLNEKAGNINQVVTTIARVADQTNLLSLNAAIEAEKAGEY 467

Query: 61  GRGFSVVATEIRRLADQTAVATYDIELMVKEIQSAVAAGVMGMDKFSDQVRRGMAEVQQV 120
           GRGFSVVATEIRRLADQTAVATYDIE +V+EIQSAVAAGVMGMDKFS++VRRGM+EV QV
Sbjct: 468 GRGFSVVATEIRRLADQTAVATYDIEQIVREIQSAVAAGVMGMDKFSEEVRRGMSEVTQV 527

Query: 121 GTQLSQIIAQVQALAPRFQVVNEGMQAQANSAEQINQALLQLSEAAQQTVESLQQSSQAI 180
           G QLSQII QVQ+LAPR Q+VNEGMQAQA  AEQINQAL+QLSEAAQQTVESL+QSSQAI
Sbjct: 528 GDQLSQIIGQVQSLAPRVQMVNEGMQAQAGGAEQINQALIQLSEAAQQTVESLRQSSQAI 587

Query: 181 DELNLVSNGLRNGVSRFKV 199
           DEL LVSN LR+GVSRFKV
Sbjct: 588 DELTLVSNELRSGVSRFKV 606


>ref|YP_002008403.1| methyl-accepting chemotaxis sensory transducer, histidine kinase
           [Cupriavidus taiwanensis LMG 19424]
 emb|CAQ72349.1| Methyl-accepting chemotaxis sensory transducer, Histidine kinase
           [Cupriavidus taiwanensis LMG 19424]
          Length = 550

 Score =  337 bits (864), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 172/199 (86%), Positives = 185/199 (92%)

Query: 1   MEDTMQDVMEAAGSVSGKLAILNEKAGNINQVVTTITKVADQTNLLSLNAAIEAEKAGEY 60
           ME TMQ VMEAAGSV+ KLA LNEKAGNINQVVTTI KVADQTNLLSLNAAIEAEKAGEY
Sbjct: 352 MEGTMQHVMEAAGSVNAKLATLNEKAGNINQVVTTIAKVADQTNLLSLNAAIEAEKAGEY 411

Query: 61  GRGFSVVATEIRRLADQTAVATYDIELMVKEIQSAVAAGVMGMDKFSDQVRRGMAEVQQV 120
           GRGF+VVATEIRRLADQTAVATYDIE MV+EIQSAV+AGVMGMDKFS++VRRGM+EV QV
Sbjct: 412 GRGFAVVATEIRRLADQTAVATYDIEQMVREIQSAVSAGVMGMDKFSEEVRRGMSEVTQV 471

Query: 121 GTQLSQIIAQVQALAPRFQVVNEGMQAQANSAEQINQALLQLSEAAQQTVESLQQSSQAI 180
           G QLSQIIAQVQ+LAPR  +VNEGMQAQA  AEQINQAL+QLSEAAQQTVESL+QSSQAI
Sbjct: 472 GDQLSQIIAQVQSLAPRVLMVNEGMQAQAGGAEQINQALMQLSEAAQQTVESLRQSSQAI 531

Query: 181 DELNLVSNGLRNGVSRFKV 199
           DEL LV+N LR+GVSRFKV
Sbjct: 532 DELTLVANDLRSGVSRFKV 550


>ref|YP_004753017.1| methyl-accepting chemotaxis sensory transducer [Collimonas
           fungivorans Ter331]
 gb|AEK62194.1| methyl-accepting chemotaxis sensory transducer [Collimonas
           fungivorans Ter331]
          Length = 542

 Score =  335 bits (860), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 171/201 (85%), Positives = 185/201 (92%)

Query: 1   MEDTMQDVMEAAGSVSGKLAILNEKAGNINQVVTTITKVADQTNLLSLNAAIEAEKAGEY 60
           MEDTM  VM+AAGSV+ KLAILNEKA NINQVVTTITKVA QTNLLSLNAAIEAEKAGEY
Sbjct: 341 MEDTMHHVMDAAGSVNAKLAILNEKASNINQVVTTITKVAGQTNLLSLNAAIEAEKAGEY 400

Query: 61  GRGFSVVATEIRRLADQTAVATYDIELMVKEIQSAVAAGVMGMDKFSDQVRRGMAEVQQV 120
           GRGFSVVATEIRRLADQTAVATYDIE MVKEIQSAV+AGVMGMDKFS++VRRG+A+VQ V
Sbjct: 401 GRGFSVVATEIRRLADQTAVATYDIEQMVKEIQSAVSAGVMGMDKFSEEVRRGIADVQNV 460

Query: 121 GTQLSQIIAQVQALAPRFQVVNEGMQAQANSAEQINQALLQLSEAAQQTVESLQQSSQAI 180
           GTQLSQII QVQAL PRFQ VNEG+QAQA  AEQI+QAL QLSEAAQQ+VESL+QSSQAI
Sbjct: 461 GTQLSQIIQQVQALTPRFQSVNEGVQAQAVGAEQISQALTQLSEAAQQSVESLRQSSQAI 520

Query: 181 DELNLVSNGLRNGVSRFKVSA 201
           DEL L +NGLRNGVSRFK+ +
Sbjct: 521 DELTLTANGLRNGVSRFKLKS 541