BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0082.p         (141 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776447.1| sulfite oxidase [Herbaspirillum seropedicae ...   203   6e-51
ref|ZP_08274532.1| Sulfite oxidase [Oxalobacteraceae bacterium I...   186   8e-46
ref|YP_001101361.1| putative sulfite oxidase subunit YedY [Hermi...   184   5e-45
ref|YP_001355063.1| putative sulfite oxidase subunit YedY [Janth...   172   1e-41
ref|YP_004751101.1| putative sulfite oxidase [Collimonas fungivo...   164   3e-39

>ref|YP_003776447.1| sulfite oxidase [Herbaspirillum seropedicae SmR1]
 gb|ADJ64539.1| sulfite oxidase protein [Herbaspirillum seropedicae SmR1]
          Length = 322

 Score =  203 bits (517), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 106/141 (75%), Positives = 121/141 (85%), Gaps = 2/141 (1%)

Query: 1   MLIKIRPDQIDIPLASEITPQEVYASRRAFMSKVAAGAIAGSGLLGVGGAFAQPATARKL 60
           MLIKIRPDQI+IP ASEITP++VY SRR+FM++VAAGA    G+  +  AFAQ    RKL
Sbjct: 1   MLIKIRPDQIEIPTASEITPKDVYLSRRSFMARVAAGAALAGGMGALPQAFAQ--QGRKL 58

Query: 61  PARLNSVYAVMDKPTAYQDATTYNNYYEFGTDKADPARTAGTLKTSPWTVSIEGEVKKPF 120
           PA+LN+ YAVMDK TAY+DAT+YNN+YEFGTDKADPA+ AGTLKTSPWT+ IEGEVKKPF
Sbjct: 59  PAKLNNAYAVMDKQTAYKDATSYNNFYEFGTDKADPAKNAGTLKTSPWTIDIEGEVKKPF 118

Query: 121 TLDLDALMKLAPLEERIYRXR 141
           TLDLDAL KLAPLEERIYR R
Sbjct: 119 TLDLDALTKLAPLEERIYRLR 139


>ref|ZP_08274532.1| Sulfite oxidase [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF31993.1| Sulfite oxidase [Oxalobacteraceae bacterium IMCC9480]
          Length = 326

 Score =  186 bits (473), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 114/143 (79%), Gaps = 2/143 (1%)

Query: 1   MLIKIRPDQIDIPLASEITPQEVYASRRAFMSKVAAGAIAGSGLLGVGG--AFAQPATAR 58
           MLIK  P+ I++P +SEITP+ ++ +RR+F+ ++A G+IA   +L +    AFAQ  +A+
Sbjct: 1   MLIKRSPNGIELPYSSEITPRAIFEARRSFIKQMAVGSIASGAMLEMASREAFAQSPSAQ 60

Query: 59  KLPARLNSVYAVMDKPTAYQDATTYNNYYEFGTDKADPARTAGTLKTSPWTVSIEGEVKK 118
           KL A+LN  Y +MDK T+Y+DATTYNN+YEFGTDK DPA+ AGTLK  PWT+SIEGEVKK
Sbjct: 61  KLAAKLNPAYVLMDKSTSYKDATTYNNFYEFGTDKTDPAKYAGTLKPRPWTISIEGEVKK 120

Query: 119 PFTLDLDALMKLAPLEERIYRXR 141
           P TLDLD+LMKLAPLEERIYR R
Sbjct: 121 PMTLDLDSLMKLAPLEERIYRLR 143


>ref|YP_001101361.1| putative sulfite oxidase subunit YedY [Herminiimonas
           arsenicoxydans]
 emb|CAL63240.1| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 326

 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 110/143 (76%), Gaps = 2/143 (1%)

Query: 1   MLIKIRPDQIDIPLASEITPQEVYASRRAFMSKVAAGAIAGSGLLGVGG--AFAQPATAR 58
           MLIK  P+ ID+P ASEITP+ ++ SRRAF+ K+A G+IAG  LL +    AFA    A+
Sbjct: 1   MLIKRNPNGIDLPFASEITPRAIFESRRAFIQKIALGSIAGGALLEMATREAFAATTAAQ 60

Query: 59  KLPARLNSVYAVMDKPTAYQDATTYNNYYEFGTDKADPARTAGTLKTSPWTVSIEGEVKK 118
           KL A  N  Y V+DKPT+Y+DATTYNN+YEFGTDK  P+R A  +KT PWT++IEGEVKK
Sbjct: 61  KLVATANPAYVVLDKPTSYKDATTYNNFYEFGTDKESPSRYAAAMKTRPWTLTIEGEVKK 120

Query: 119 PFTLDLDALMKLAPLEERIYRXR 141
           P TLD+D+L+KLAPLEERIYR R
Sbjct: 121 PMTLDIDSLLKLAPLEERIYRLR 143


>ref|YP_001355063.1| putative sulfite oxidase subunit YedY [Janthinobacterium sp.
           Marseille]
 gb|ABR89781.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 325

 Score =  172 bits (436), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 91/143 (63%), Positives = 109/143 (76%), Gaps = 3/143 (2%)

Query: 1   MLIKIRPDQIDIPLASEITPQEVYASRRAFMSKVAAGAIAGSGLLGVGG--AFAQPATAR 58
           MLIK  P+ ID+P ASEITP++V+ SRR F+ K+A G+IAG  LL +    AFA PA  +
Sbjct: 1   MLIKRNPNGIDLPFASEITPRQVFESRRDFIRKLALGSIAGGALLEMASREAFAAPAAQK 60

Query: 59  KLPARLNSVYAVMDKPTAYQDATTYNNYYEFGTDKADPARTAGTLKTSPWTVSIEGEVKK 118
              A+ N  Y V+DK T+Y+DATTYNNYYEFGTDK  PAR A  LKT PWTVSIEGE+KK
Sbjct: 61  LA-AQQNPAYVVLDKQTSYKDATTYNNYYEFGTDKESPARYASALKTRPWTVSIEGEIKK 119

Query: 119 PFTLDLDALMKLAPLEERIYRXR 141
           P TLDLD+L+KLAPLEER+YR R
Sbjct: 120 PMTLDLDSLLKLAPLEERVYRLR 142


>ref|YP_004751101.1| putative sulfite oxidase [Collimonas fungivorans Ter331]
 gb|AEK60278.1| putative Sulfite oxidase [Collimonas fungivorans Ter331]
          Length = 331

 Score =  164 bits (416), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 86/138 (62%), Positives = 108/138 (78%), Gaps = 2/138 (1%)

Query: 6   RPDQIDIPLASEITPQEVYASRRAFMSKVAAGAIAGSGLLGVGGA--FAQPATARKLPAR 63
           RP+ ID+P +SEITP+EV+ SRR+FM ++A GA    GLL +     +AQ + A+KL A+
Sbjct: 11  RPNGIDLPFSSEITPREVFESRRSFMRQLAVGAAGAGGLLELAAGEAWAQASGAQKLAAK 70

Query: 64  LNSVYAVMDKPTAYQDATTYNNYYEFGTDKADPARTAGTLKTSPWTVSIEGEVKKPFTLD 123
            N  Y VMDK T ++DATTYNN+YEFGT+K DPA  AGTLKT PWT++IEGEVKKP TLD
Sbjct: 71  ANPAYVVMDKATPFKDATTYNNFYEFGTEKTDPAENAGTLKTRPWTIAIEGEVKKPLTLD 130

Query: 124 LDALMKLAPLEERIYRXR 141
           +D+L+KLAPLEERIYR R
Sbjct: 131 IDSLLKLAPLEERIYRLR 148