BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0079.p (388 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776449.1| cobalt/zinc/cadmium resistance two component... 370 e-100 ref|YP_004750845.1| sensor kinase protein [Collimonas fungivoran... 365 6e-99 ref|ZP_03265150.1| heavy metal sensor signal transduction histid... 322 6e-86 ref|YP_003607271.1| multi-sensor signal transduction histidine k... 322 9e-86 ref|ZP_06842746.1| multi-sensor signal transduction histidine ki... 320 3e-85 >ref|YP_003776449.1| cobalt/zinc/cadmium resistance two component transmembrane sensor histidine kinase [Herbaspirillum seropedicae SmR1] gb|ADJ64541.1| cobalt/zinc/cadmium resistance two component transmembrane sensor histidine kinase protein [Herbaspirillum seropedicae SmR1] Length = 475 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 185/275 (67%), Positives = 216/275 (78%), Gaps = 2/275 (0%) Query: 111 PAWRMSRRAAEITPANLSTRLREEDAPAELRQLAGALNAMLDRLENGYEHLSQFSADLAH 170 P MS+RAA+ITP +LS RL +E PAELR++A + NAMLDRLE GY HL+QFS DLAH Sbjct: 201 PLEAMSQRAAQITPDHLSARLDQEGMPAELRRVALSFNAMLDRLEAGYAHLAQFSGDLAH 260 Query: 171 EIRTPVNILMGQTQVTLGQRRNVEEYEQLLESNLEELTRLSRIIENILFLAQTDHAQLVV 230 EIRTP+N+LMGQ+QV LGQRR+ EEYEQ+LESN+EEL RLSRI+ENILFLAQ DHA L V Sbjct: 261 EIRTPINVLMGQSQVALGQRRSPEEYEQVLESNVEELQRLSRIVENILFLAQADHAALAV 320 Query: 231 DRSAIDLREELQKIADYFEGVAAERDMQFEVDAAPGLACSANLVMWRRAVSNLVVNAVRY 290 +R+A+DL EEL +I DYFEG+A ER M+F+V AA C ANL+MWRR VSNLV+NAVRY Sbjct: 321 ERNALDLAEELGRITDYFEGIADERGMRFDVQAAG--QCQANLIMWRRVVSNLVINAVRY 378 Query: 291 GDAGTAIRISVRPTADGIAIDVANRGMAMTRQQMERMFDRFYRGDKSRSEFTESNGLGLA 350 G A + IRI +G I V NR +T Q M RMFDRFYRGD+SRS FTESNGLGLA Sbjct: 379 GRAESTIRILAESDGEGSRIMVENRSEDVTAQAMARMFDRFYRGDRSRSAFTESNGLGLA 438 Query: 351 IVKAIMTVHGGTAAVACSADGWIAFSLRFPTRGKI 385 IVKAIM +HGGTAAV C A GWI FSLRFP+ + Sbjct: 439 IVKAIMALHGGTAAVECPAPGWIRFSLRFPSAAAV 473 Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 84/105 (80%), Positives = 90/105 (85%) Query: 7 WTLAFRVSALFALIACLVVTGLGMYLYTSARQSLEVRADYTLIGRVEHFRNLLHDLYNVE 66 WTL RV+ALFAL+ LVVTGLG YL SA Q+L RAD LIGRVEHFRNL+HDLYNVE Sbjct: 11 WTLTTRVTALFALMTSLVVTGLGFYLDRSAGQALSQRADQALIGRVEHFRNLMHDLYNVE 70 Query: 67 QMEQRPALFESMLGNEQDVRIFRRQGEAPFINMNPDNLTPPAMTP 111 QMEQRPALFESM+GNEQDVRIFRRQGEAPFI NPD+L PPAMTP Sbjct: 71 QMEQRPALFESMMGNEQDVRIFRRQGEAPFIQSNPDHLVPPAMTP 115 >ref|YP_004750845.1| sensor kinase protein [Collimonas fungivorans Ter331] gb|AEK60022.1| sensor kinase protein [Collimonas fungivorans Ter331] Length = 470 Score = 365 bits (938), Expect = 6e-99, Method: Compositional matrix adjust. Identities = 181/270 (67%), Positives = 216/270 (80%), Gaps = 2/270 (0%) Query: 111 PAWRMSRRAAEITPANLSTRLREEDAPAELRQLAGALNAMLDRLENGYEHLSQFSADLAH 170 P M+ RAAE++P N++ RLREEDAP ELR+LA + NAMLDRL +GYEHLSQFSADLAH Sbjct: 197 PLTAMACRAAEVSPTNIAIRLREEDAPHELRRLAASFNAMLDRLADGYEHLSQFSADLAH 256 Query: 171 EIRTPVNILMGQTQVTLGQRRNVEEYEQLLESNLEELTRLSRIIENILFLAQTDHAQLVV 230 EIRTP+ LMGQTQVTLGQ RN EY+Q+LESNLEEL RLSRI+ENILFLA DHA L V Sbjct: 257 EIRTPIGALMGQTQVTLGQVRNAAEYQQVLESNLEELQRLSRIVENILFLAHADHAGLAV 316 Query: 231 DRSAIDLREELQKIADYFEGVAAERDMQFEVDAAPGLACSANLVMWRRAVSNLVVNAVRY 290 +++ + L +EL KIADYFEGVA ER ++ EVDA+ + S VMWRRAVSNLVVNAVRY Sbjct: 317 EKTPLVLADELHKIADYFEGVAEERGIRLEVDASGKVQASP--VMWRRAVSNLVVNAVRY 374 Query: 291 GDAGTAIRISVRPTADGIAIDVANRGMAMTRQQMERMFDRFYRGDKSRSEFTESNGLGLA 350 G+ +R+S RP A GI + V N+G + +Q+ER+FDRFYRGD+SRSE+TESNGLGLA Sbjct: 375 AAPGSTVRLSGRPQAQGIDVAVENQGDPIPPEQLERLFDRFYRGDQSRSEYTESNGLGLA 434 Query: 351 IVKAIMTVHGGTAAVACSADGWIAFSLRFP 380 IV+AIM VHGG+A VACS +G I FSL FP Sbjct: 435 IVRAIMLVHGGSAEVACSREGLIRFSLYFP 464 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 74/111 (66%), Positives = 90/111 (81%) Query: 1 MRPWRSWTLAFRVSALFALIACLVVTGLGMYLYTSARQSLEVRADYTLIGRVEHFRNLLH 60 M WR +L RV+ LFALIAC +V LGMYLY+S RQ+LE RADY+LIG+VEHFR+LLH Sbjct: 1 MNAWRRQSLTARVTFLFALIACAIVATLGMYLYSSTRQALETRADYSLIGKVEHFRHLLH 60 Query: 61 DLYNVEQMEQRPALFESMLGNEQDVRIFRRQGEAPFINMNPDNLTPPAMTP 111 DLYNV+QME P LFE+MLG+EQDV IF G+APF+ +NPD++TPP MTP Sbjct: 61 DLYNVKQMEDSPTLFETMLGSEQDVLIFAYPGQAPFVRVNPDHMTPPPMTP 111 >ref|ZP_03265150.1| heavy metal sensor signal transduction histidine kinase [Burkholderia sp. H160] gb|EEA03228.1| heavy metal sensor signal transduction histidine kinase [Burkholderia sp. H160] Length = 466 Score = 322 bits (825), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 163/273 (59%), Positives = 199/273 (72%), Gaps = 2/273 (0%) Query: 108 AMTPAWRMSRRAAEITPANLSTRLREEDAPAELRQLAGALNAMLDRLENGYEHLSQFSAD 167 A+ P ++ RAA+I+PANL+ RL +E AP ELRQL A NAMLDRL +GY+ L QFSAD Sbjct: 194 ALRPVREIATRAAQISPANLAVRLDDEAAPVELRQLTQAFNAMLDRLADGYQRLQQFSAD 253 Query: 168 LAHEIRTPVNILMGQTQVTLGQRRNVEEYEQLLESNLEELTRLSRIIENILFLAQTDHAQ 227 LAHEIRTPV L+GQTQV L Q R +EY+QLLESNLEEL+RLS I ENILFLA DHA Sbjct: 254 LAHEIRTPVGALVGQTQVALAQPREPDEYQQLLESNLEELSRLSHIAENILFLAHADHAA 313 Query: 228 LVVDRSAIDLREELQKIADYFEGVAAERDMQFEVDAAPGLACSANLVMWRRAVSNLVVNA 287 L ++R +DL+ EL +IADYFEG+A ER M+FEVDA SAN ++WRRA++NLV NA Sbjct: 314 LSIERQPVDLQGELVRIADYFEGLADERGMRFEVDATG--VVSANPMLWRRAINNLVANA 371 Query: 288 VRYGDAGTAIRISVRPTADGIAIDVANRGMAMTRQQMERMFDRFYRGDKSRSEFTESNGL 347 VRYG + +R+ G + V N G + Q++R+FDRFYRGD +RS FTESNGL Sbjct: 372 VRYGAGDSIVRLRGAQDEAGALVTVENEGDPIPTAQLDRLFDRFYRGDAARSAFTESNGL 431 Query: 348 GLAIVKAIMTVHGGTAAVACSADGWIAFSLRFP 380 GLAIVKAIM +HGG+A V C G + F LRFP Sbjct: 432 GLAIVKAIMHLHGGSAQVVCPLPGVVRFELRFP 464 Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 59/112 (52%), Positives = 78/112 (69%) Query: 1 MRPWRSWTLAFRVSALFALIACLVVTGLGMYLYTSARQSLEVRADYTLIGRVEHFRNLLH 60 M+ W +L R + LFALIAC+V+ LG Y Y SA SL+ RAD L GRV HF ++H Sbjct: 1 MKLWTERSLIARTTLLFALIACVVIGSLGAYFYHSAEVSLQRRADVVLSGRVGHFSRIVH 60 Query: 61 DLYNVEQMEQRPALFESMLGNEQDVRIFRRQGEAPFINMNPDNLTPPAMTPA 112 DLY+V ++++RP LFE+MLG E+DV IFRR GEAPF+++NP L P + A Sbjct: 61 DLYSVSELKKRPLLFETMLGAEEDVLIFRRPGEAPFVDVNPARLAVPDLQDA 112 >ref|YP_003607271.1| multi-sensor signal transduction histidine kinase [Burkholderia sp. CCGE1002] gb|ADG17760.1| multi-sensor signal transduction histidine kinase [Burkholderia sp. CCGE1002] Length = 466 Score = 322 bits (824), Expect = 9e-86, Method: Compositional matrix adjust. Identities = 166/273 (60%), Positives = 200/273 (73%), Gaps = 2/273 (0%) Query: 108 AMTPAWRMSRRAAEITPANLSTRLREEDAPAELRQLAGALNAMLDRLENGYEHLSQFSAD 167 A+ P ++ RAA+I+P NL+ RL +E AP ELRQL A NAMLDRL +GY+ L QFSAD Sbjct: 194 ALRPVREIAARAAQISPTNLAVRLDDEAAPVELRQLTHAFNAMLDRLADGYQRLQQFSAD 253 Query: 168 LAHEIRTPVNILMGQTQVTLGQRRNVEEYEQLLESNLEELTRLSRIIENILFLAQTDHAQ 227 LAHEIRTPV L+GQTQV L Q R +EY+QLLESNLEEL RLS I ENILFLA DHA Sbjct: 254 LAHEIRTPVGALVGQTQVALAQPREPDEYQQLLESNLEELNRLSHIAENILFLAHADHAA 313 Query: 228 LVVDRSAIDLREELQKIADYFEGVAAERDMQFEVDAAPGLACSANLVMWRRAVSNLVVNA 287 L ++R +DL EL +IADYFEG+A ER M+FEVDAA G+A SAN ++ RRA++NLVVNA Sbjct: 314 LSIERQPVDLHGELVRIADYFEGLADERGMRFEVDAA-GIA-SANPMLCRRAINNLVVNA 371 Query: 288 VRYGDAGTAIRISVRPTADGIAIDVANRGMAMTRQQMERMFDRFYRGDKSRSEFTESNGL 347 VRYG T +R+ G + V N G + Q++R+FDRFYRGD +RS FTESNGL Sbjct: 372 VRYGSGDTIVRLRGAQDQAGALVTVENEGEPIPAAQLDRLFDRFYRGDAARSAFTESNGL 431 Query: 348 GLAIVKAIMTVHGGTAAVACSADGWIAFSLRFP 380 GLAIVKAIM +HGG+A V C G + F LRFP Sbjct: 432 GLAIVKAIMHLHGGSARVVCPLPGVVRFELRFP 464 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 58/107 (54%), Positives = 76/107 (71%) Query: 1 MRPWRSWTLAFRVSALFALIACLVVTGLGMYLYTSARQSLEVRADYTLIGRVEHFRNLLH 60 M+ W +L R + LFALIAC V+ LG Y Y SA +L+ RAD L GRVEHF ++H Sbjct: 1 MKLWTERSLIARTTLLFALIACAVIGSLGAYFYHSAEVALQRRADVVLSGRVEHFSRIVH 60 Query: 61 DLYNVEQMEQRPALFESMLGNEQDVRIFRRQGEAPFINMNPDNLTPP 107 DLY+V ++++RP LFE+MLG E+DV IFRR GEAPF+++NP L P Sbjct: 61 DLYSVSELKKRPLLFETMLGAEEDVLIFRRPGEAPFVDVNPGGLAVP 107 >ref|ZP_06842746.1| multi-sensor signal transduction histidine kinase [Burkholderia sp. Ch1-1] gb|EFG69705.1| multi-sensor signal transduction histidine kinase [Burkholderia sp. Ch1-1] Length = 466 Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 168/273 (61%), Positives = 201/273 (73%), Gaps = 2/273 (0%) Query: 108 AMTPAWRMSRRAAEITPANLSTRLREEDAPAELRQLAGALNAMLDRLENGYEHLSQFSAD 167 A+ P ++ RAA+I+PA+LS RL E AP ELRQL A NAMLDRL +GY+ LSQFSAD Sbjct: 194 ALRPVREIATRAAQISPASLSVRLDSEAAPLELRQLTHAFNAMLDRLADGYQRLSQFSAD 253 Query: 168 LAHEIRTPVNILMGQTQVTLGQRRNVEEYEQLLESNLEELTRLSRIIENILFLAQTDHAQ 227 LAHEIRTPV L+GQTQVTL + R EEY+QLLESNLEEL+RLS I ENILFLA DHA Sbjct: 254 LAHEIRTPVGALIGQTQVTLARTREPEEYQQLLESNLEELSRLSHIAENILFLAHADHAA 313 Query: 228 LVVDRSAIDLREELQKIADYFEGVAAERDMQFEVDAAPGLACSANLVMWRRAVSNLVVNA 287 L VDR +DLR EL +IADYFEG A ER M+F V+A G+A S N ++ RRA++NLVVNA Sbjct: 314 LSVDREPVDLRGELVRIADYFEGPADERGMRFVVEAE-GVA-SVNPMLCRRAINNLVVNA 371 Query: 288 VRYGDAGTAIRISVRPTADGIAIDVANRGMAMTRQQMERMFDRFYRGDKSRSEFTESNGL 347 VRYG + T +R+ G + V N G + +Q+ R+FDRFYR D +RS FTES+GL Sbjct: 372 VRYGASDTVVRLRGTQDEGGATVVVENDGAPIPEEQLGRLFDRFYRADAARSAFTESSGL 431 Query: 348 GLAIVKAIMTVHGGTAAVACSADGWIAFSLRFP 380 GLAIVKAIM +HGGTA V C A G + F LRFP Sbjct: 432 GLAIVKAIMHLHGGTARVVCPAPGVVRFELRFP 464 Score = 130 bits (326), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 58/109 (53%), Positives = 78/109 (71%) Query: 1 MRPWRSWTLAFRVSALFALIACLVVTGLGMYLYTSARQSLEVRADYTLIGRVEHFRNLLH 60 M+ W +L R + LFA IAC+V+ LG Y Y SA SL++RAD L RVEHF ++H Sbjct: 1 MKFWTGRSLTARTTVLFASIACVVIGTLGAYFYRSAELSLQLRADLVLTARVEHFSRIVH 60 Query: 61 DLYNVEQMEQRPALFESMLGNEQDVRIFRRQGEAPFINMNPDNLTPPAM 109 DLY+V +++ RP LFE+MLG EQDV +FRR GEAPFI++NP+ + PA+ Sbjct: 61 DLYSVSELKNRPLLFETMLGAEQDVLLFRRPGEAPFIDVNPEGVAVPAL 109