BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0056.p (193 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776466.1| intracellular protease/amidase [Herbaspirill... 337 5e-91 ref|YP_004362011.1| intracellular protease, PfpI family protein ... 331 3e-89 ref|YP_002230017.1| family C56 cysteine peptidase [Burkholderia ... 328 2e-88 ref|YP_370309.1| peptidase C56, PfpI [Burkholderia sp. 383] >gi|... 328 2e-88 ref|ZP_02887567.1| intracellular protease, PfpI family [Burkhold... 328 3e-88 >ref|YP_003776466.1| intracellular protease/amidase [Herbaspirillum seropedicae SmR1] gb|ADJ64558.1| intracellular protease/amidase protein [Herbaspirillum seropedicae SmR1] Length = 195 Score = 337 bits (864), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 161/193 (83%), Positives = 178/193 (92%) Query: 1 MAAKKILLLTGDFAEDYETMVPFQALQMVGHAVHAVCPGKKAGDKIKTAIHDFEGDQTYT 60 MAAKKILLLTGDFAEDYETMVPFQALQMVGH VHAVCPGKKAGDK+KTAIHDFEGDQTYT Sbjct: 3 MAAKKILLLTGDFAEDYETMVPFQALQMVGHTVHAVCPGKKAGDKVKTAIHDFEGDQTYT 62 Query: 61 EKPGHQFALNASFDEVDPAKYDAIVIAGGRAPEYLRLDAKVIAIVRHFAEAKKPIAAVCH 120 EKPGHQFALNASFD+V A YDA+V+AGGRAPEYLRL+ KVI +V+ FA+A KPIAAVCH Sbjct: 63 EKPGHQFALNASFDDVSAAGYDALVVAGGRAPEYLRLNPKVIELVQAFAKADKPIAAVCH 122 Query: 121 GAQLLAAAGVIEGKKISAYPACAPEVKLAGGHYAEIAVDAAVTDGNFVTSPAWPGHPQWL 180 G Q+LAAAGV+EGKK+SAYPACAPEVKLAGG +A+IAVDAA+TDG VT+PAWP HP WL Sbjct: 123 GPQVLAAAGVLEGKKVSAYPACAPEVKLAGGQFADIAVDAAITDGKLVTAPAWPAHPAWL 182 Query: 181 AQFLKVLGTEIKL 193 AQFL+VLGT I+L Sbjct: 183 AQFLQVLGTRIEL 195 >ref|YP_004362011.1| intracellular protease, PfpI family protein [Burkholderia gladioli BSR3] gb|AEA62055.1| intracellular protease, PfpI family protein [Burkholderia gladioli BSR3] Length = 193 Score = 331 bits (849), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 161/193 (83%), Positives = 172/193 (89%) Query: 1 MAAKKILLLTGDFAEDYETMVPFQALQMVGHAVHAVCPGKKAGDKIKTAIHDFEGDQTYT 60 MAAK+IL LTGDFAEDYETMVPFQALQ VGH VHAVCPGK+AGDKIKTAIHDFEGDQTYT Sbjct: 1 MAAKQILFLTGDFAEDYETMVPFQALQAVGHTVHAVCPGKRAGDKIKTAIHDFEGDQTYT 60 Query: 61 EKPGHQFALNASFDEVDPAKYDAIVIAGGRAPEYLRLDAKVIAIVRHFAEAKKPIAAVCH 120 EKPGH FALNASFDEVD A+YDAI IAGGRAPEYLRLD KVIA+VR F EA KP+AA+CH Sbjct: 61 EKPGHLFALNASFDEVDVARYDAIAIAGGRAPEYLRLDPKVIALVRAFVEAGKPVAAICH 120 Query: 121 GAQLLAAAGVIEGKKISAYPACAPEVKLAGGHYAEIAVDAAVTDGNFVTSPAWPGHPQWL 180 AQLLAAA VI GKKISAYPACAPEV+LAGG YA+I VDAAVTD FVT+PAWP HP WL Sbjct: 121 AAQLLAAADVIRGKKISAYPACAPEVRLAGGEYADIPVDAAVTDAPFVTAPAWPAHPAWL 180 Query: 181 AQFLKVLGTEIKL 193 AQFL +LGT I+L Sbjct: 181 AQFLALLGTRIEL 193 >ref|YP_002230017.1| family C56 cysteine peptidase [Burkholderia cenocepacia J2315] emb|CAR51169.1| cysteine peptidase, family C56 [Burkholderia cenocepacia J2315] Length = 193 Score = 328 bits (842), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 159/193 (82%), Positives = 172/193 (89%) Query: 1 MAAKKILLLTGDFAEDYETMVPFQALQMVGHAVHAVCPGKKAGDKIKTAIHDFEGDQTYT 60 MAAKKIL LTGDFAEDYETMVPFQALQ VGH V AVCPGK+AGDKIKTAIHDFEGDQTYT Sbjct: 1 MAAKKILFLTGDFAEDYETMVPFQALQAVGHHVDAVCPGKRAGDKIKTAIHDFEGDQTYT 60 Query: 61 EKPGHQFALNASFDEVDPAKYDAIVIAGGRAPEYLRLDAKVIAIVRHFAEAKKPIAAVCH 120 EKPGHQF LNA+FD+VD A+YDA+ IAGGRAPEYLRLD KVI++VR FAEA KPIAA+CH Sbjct: 61 EKPGHQFTLNAAFDDVDAARYDALAIAGGRAPEYLRLDPKVISLVREFAEAGKPIAAICH 120 Query: 121 GAQLLAAAGVIEGKKISAYPACAPEVKLAGGHYAEIAVDAAVTDGNFVTSPAWPGHPQWL 180 AQLLAAA VI GK+ISAYPACAPEVKLAGG YA+I VDAAVTD FVT+PAWP HP WL Sbjct: 121 AAQLLAAADVIRGKRISAYPACAPEVKLAGGEYADIPVDAAVTDAPFVTAPAWPAHPAWL 180 Query: 181 AQFLKVLGTEIKL 193 AQFL +LGT I+L Sbjct: 181 AQFLALLGTRIEL 193 >ref|YP_370309.1| peptidase C56, PfpI [Burkholderia sp. 383] gb|ABB09665.1| Peptidase C56, PfpI [Burkholderia sp. 383] Length = 193 Score = 328 bits (841), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 158/193 (81%), Positives = 172/193 (89%) Query: 1 MAAKKILLLTGDFAEDYETMVPFQALQMVGHAVHAVCPGKKAGDKIKTAIHDFEGDQTYT 60 MAAKKIL LTGDFAEDYETMVPFQALQ VGH V AVCPGK+AGDKIKTAIHDFEGDQTYT Sbjct: 1 MAAKKILFLTGDFAEDYETMVPFQALQAVGHHVDAVCPGKRAGDKIKTAIHDFEGDQTYT 60 Query: 61 EKPGHQFALNASFDEVDPAKYDAIVIAGGRAPEYLRLDAKVIAIVRHFAEAKKPIAAVCH 120 EKPGHQF LNA+FD+VD ++YDA+ IAGGRAPEYLRLD KVI++VR FAEA KPIAA+CH Sbjct: 61 EKPGHQFTLNAAFDDVDASRYDALAIAGGRAPEYLRLDPKVISLVREFAEAGKPIAAICH 120 Query: 121 GAQLLAAAGVIEGKKISAYPACAPEVKLAGGHYAEIAVDAAVTDGNFVTSPAWPGHPQWL 180 AQLLAAA VI GK+ISAYPACAPEVKLAGG YA+I VDAAVTD FVT+PAWP HP WL Sbjct: 121 AAQLLAAADVIRGKRISAYPACAPEVKLAGGEYADITVDAAVTDAPFVTAPAWPAHPAWL 180 Query: 181 AQFLKVLGTEIKL 193 AQFL +LGT I+L Sbjct: 181 AQFLALLGTRIEL 193 >ref|ZP_02887567.1| intracellular protease, PfpI family [Burkholderia graminis C4D1M] gb|EDT06846.1| intracellular protease, PfpI family [Burkholderia graminis C4D1M] Length = 193 Score = 328 bits (840), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 157/193 (81%), Positives = 171/193 (88%) Query: 1 MAAKKILLLTGDFAEDYETMVPFQALQMVGHAVHAVCPGKKAGDKIKTAIHDFEGDQTYT 60 MAAKKIL LTGDFAEDYETMVPFQALQ VGH V AVCP KKAGD+IKTAIHDFEGDQTYT Sbjct: 1 MAAKKILFLTGDFAEDYETMVPFQALQAVGHVVDAVCPDKKAGDRIKTAIHDFEGDQTYT 60 Query: 61 EKPGHQFALNASFDEVDPAKYDAIVIAGGRAPEYLRLDAKVIAIVRHFAEAKKPIAAVCH 120 EKPGH FALNASF++ DP +YDA+ IAGGRAPEYLRL+ KVI IVR FAEA KPIAA+CH Sbjct: 61 EKPGHLFALNASFEDADPRQYDALAIAGGRAPEYLRLNPKVIDIVRQFAEASKPIAAICH 120 Query: 121 GAQLLAAAGVIEGKKISAYPACAPEVKLAGGHYAEIAVDAAVTDGNFVTSPAWPGHPQWL 180 AQLLAAA VI GK+ISAYPACAPEVKLAGG YA+I VDAA+TDGNFVT+PAWP HP+WL Sbjct: 121 AAQLLAAADVIRGKRISAYPACAPEVKLAGGEYADIPVDAAITDGNFVTAPAWPAHPEWL 180 Query: 181 AQFLKVLGTEIKL 193 QFL +LGT I+L Sbjct: 181 RQFLVLLGTRIEL 193