BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0053.p         (142 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004754123.1| ATPases of the AAA+ class [Collimonas fungiv...   185   2e-45
ref|ZP_08275892.1| ATPases of the AAA+ class [Oxalobacteraceae b...   154   3e-36
ref|YP_557694.1| hypothetical protein Bxe_A3341 [Burkholderia xe...   145   1e-33
ref|YP_004022081.1| hypothetical protein RBRH_00480 [Burkholderi...   145   2e-33
ref|ZP_04945080.1| hypothetical protein BDAG_00959 [Burkholderia...   144   3e-33

>ref|YP_004754123.1| ATPases of the AAA+ class [Collimonas fungivorans Ter331]
 gb|AEK63300.1| ATPases of the AAA+ class [Collimonas fungivorans Ter331]
          Length = 135

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 93/135 (68%), Positives = 106/135 (78%), Gaps = 6/135 (4%)

Query: 12  SRFIKTLFAASILFAAA----AQAAEPSVSFTAPMDGAVVTSPFDVKFAVTGMEVKPAGE 67
           SR    LF+A++L A+     A AA  SVSF  P DGAVV+SPF VKF V+GMEVKPAG+
Sbjct: 3   SRIFSLLFSATLLSASLLPQLAHAA--SVSFIEPADGAVVSSPFTVKFGVSGMEVKPAGD 60

Query: 68  MAANTGHHHLLINAGPIAKGEPIPMDDTHLHYGKGQTEAKVTLPPGKYKLTMQFADGAHQ 127
           M ANTGHHHLLIN   I  G+ IP+DD HLH+GKGQTE  VTLPPG+YKLTMQFA+GAHQ
Sbjct: 61  MTANTGHHHLLINEDSIPAGQSIPIDDKHLHFGKGQTETSVTLPPGEYKLTMQFANGAHQ 120

Query: 128 SYGPALSKTINITVK 142
           SYGP LSKTIN+TVK
Sbjct: 121 SYGPELSKTINVTVK 135


>ref|ZP_08275892.1| ATPases of the AAA+ class [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF30637.1| ATPases of the AAA+ class [Oxalobacteraceae bacterium IMCC9480]
          Length = 129

 Score =  154 bits (390), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 73/107 (68%), Positives = 86/107 (80%)

Query: 36  VSFTAPMDGAVVTSPFDVKFAVTGMEVKPAGEMAANTGHHHLLINAGPIAKGEPIPMDDT 95
           VSF  P DGA V + F VKFAV GM+VKPAGE++  +GHHHLLINA  I  GEP+P D+T
Sbjct: 23  VSFVEPADGATVPTTFPVKFAVEGMDVKPAGELSPTSGHHHLLINATAIPTGEPVPFDET 82

Query: 96  HLHYGKGQTEAKVTLPPGKYKLTMQFADGAHQSYGPALSKTINITVK 142
           H+H+GKGQTEA VTL PGKY+LT+QFA+GAHQSYG  LSKTI + VK
Sbjct: 83  HIHFGKGQTEATVTLKPGKYQLTLQFANGAHQSYGAPLSKTITVNVK 129


>ref|YP_557694.1| hypothetical protein Bxe_A3341 [Burkholderia xenovorans LB400]
 gb|ABE29642.1| Hypothetical protein Bxe_A3341 [Burkholderia xenovorans LB400]
          Length = 133

 Score =  145 bits (367), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 71/134 (52%), Positives = 90/134 (67%), Gaps = 2/134 (1%)

Query: 9   LRPSRFIKTLFAASILFAAAAQAAEPSVSFTAPMDGAVVTSPFDVKFAVTGMEVKPAGEM 68
            R +    T+ A  +  +  AQAA  SVSF  P DGA V++P  V F V G+++ PAG M
Sbjct: 2   FRNTWLAGTVLAGLLAVSGVAQAA--SVSFVQPADGATVSNPVHVVFGVDGLKIAPAGTM 59

Query: 69  AANTGHHHLLINAGPIAKGEPIPMDDTHLHYGKGQTEAKVTLPPGKYKLTMQFADGAHQS 128
              TGHHHLL++  P+ KGE IP +D  LH+GKGQTE  +TLPPG + LT+QF DGAH+S
Sbjct: 60  TEGTGHHHLLVDGKPVPKGEVIPANDKSLHFGKGQTETDLTLPPGDHTLTLQFGDGAHRS 119

Query: 129 YGPALSKTINITVK 142
           YGP LSKTI + VK
Sbjct: 120 YGPDLSKTITVHVK 133


>ref|YP_004022081.1| hypothetical protein RBRH_00480 [Burkholderia rhizoxinica HKI 454]
 emb|CBW76562.1| Hypothetical protein RBRH_00480 [Burkholderia rhizoxinica HKI 454]
          Length = 182

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 69/129 (53%), Positives = 87/129 (67%)

Query: 14  FIKTLFAASILFAAAAQAAEPSVSFTAPMDGAVVTSPFDVKFAVTGMEVKPAGEMAANTG 73
             +T    S LFA    A    VSF  P DGA V++P  +KFAV GM+V PAG+M   TG
Sbjct: 54  LCRTTTLLSALFAGCVTAHAADVSFVEPKDGAQVSNPIHLKFAVDGMKVAPAGDMTPGTG 113

Query: 74  HHHLLINAGPIAKGEPIPMDDTHLHYGKGQTEAKVTLPPGKYKLTMQFADGAHQSYGPAL 133
           HHHLL++   +  GE +P++D  +HYGKGQTE  VTL PG + LTMQFADGAH+SYGP +
Sbjct: 114 HHHLLVDGQALPSGEVVPVNDHSIHYGKGQTETDVTLTPGDHTLTMQFADGAHRSYGPEM 173

Query: 134 SKTINITVK 142
           S+TI + VK
Sbjct: 174 SQTIKVHVK 182


>ref|ZP_04945080.1| hypothetical protein BDAG_00959 [Burkholderia dolosa AUO158]
 gb|EAY68251.1| hypothetical protein BDAG_00959 [Burkholderia dolosa AUO158]
          Length = 194

 Score =  144 bits (364), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 70/135 (51%), Positives = 87/135 (64%)

Query: 8   TLRPSRFIKTLFAASILFAAAAQAAEPSVSFTAPMDGAVVTSPFDVKFAVTGMEVKPAGE 67
           T+   ++I        L  + A  AE  V F  P DGA V+SP  VKF + GM +KPAG+
Sbjct: 60  TMLNRKWIAGAVCVVALAVSTAARAEARVFFVEPQDGATVSSPVHVKFGLEGMALKPAGD 119

Query: 68  MAANTGHHHLLINAGPIAKGEPIPMDDTHLHYGKGQTEAKVTLPPGKYKLTMQFADGAHQ 127
           M  +TGHHHLLI+  P+ KG+ IP  D  LH+GKGQTE  V LPPG++ LT+Q  DGAH+
Sbjct: 120 MTPDTGHHHLLIDGKPVPKGDVIPATDHSLHFGKGQTETDVKLPPGQHTLTLQLGDGAHR 179

Query: 128 SYGPALSKTINITVK 142
           SYGP LS TI I VK
Sbjct: 180 SYGPELSSTITINVK 194