BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0050.p (419 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776475.1| methionyl-tRNA synthetase [Herbaspirillum se... 816 0.0 ref|YP_001352802.1| methionyl-tRNA synthetase [Janthinobacterium... 745 0.0 ref|YP_004754126.1| methionyl-tRNA synthetase [Collimonas fungiv... 736 0.0 ref|ZP_08276269.1| Methionyl-tRNA synthetase [Oxalobacteraceae b... 715 0.0 ref|ZP_04577129.1| methionyl-tRNA synthetase [Oxalobacter formig... 669 0.0 >ref|YP_003776475.1| methionyl-tRNA synthetase [Herbaspirillum seropedicae SmR1] gb|ADJ64567.1| methionyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1] Length = 690 Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust. Identities = 386/416 (92%), Positives = 397/416 (95%) Query: 1 MFLPDRYIKGECPKCGTKDQYGDSCENCSAVYAPTDLKNPYSTLSGATPVMKSSEHFFFK 60 MFLPDRYIKGECPKCGTKDQYGDSCENCSAVY+PTDLKNPYSTLSGATPVMKSSEHFFFK Sbjct: 137 MFLPDRYIKGECPKCGTKDQYGDSCENCSAVYSPTDLKNPYSTLSGATPVMKSSEHFFFK 196 Query: 61 LSDPKCVAFLREWALDNNRLQPEVANKAKEWLDGEGGLGDWDISRDAPYFGIEIPDAPGK 120 LSDPKCVAFLREWALD+NRLQPEVANKAKEWLDGEGGLGDWDISRDAPYFGIEIPDAPGK Sbjct: 197 LSDPKCVAFLREWALDSNRLQPEVANKAKEWLDGEGGLGDWDISRDAPYFGIEIPDAPGK 256 Query: 121 YFYVWLDAPIGYLASLKNYFGKTGRDFDAFMADDKTEQYHFIGKDITYFHTLFWPAMLKF 180 YFYVWLDAPIGYLASLKNYF KTGRDFDAFMADDKTEQYHFIGKDITYFHTLFWPAMLKF Sbjct: 257 YFYVWLDAPIGYLASLKNYFAKTGRDFDAFMADDKTEQYHFIGKDITYFHTLFWPAMLKF 316 Query: 181 AGRKTPTNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWLRYYIAAKLNAKVEDV 240 AGRKTP NVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWLRYYIAAKLNAKVEDV Sbjct: 317 AGRKTPNNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWLRYYIAAKLNAKVEDV 376 Query: 241 DFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFDGKLSTAWATADDAFLTKLRGIAPEI 300 DFNPDDFVARVNADLIGKYVNIASRAAGFIAKRF+G++ST WATADDAFL KLRG+A EI Sbjct: 377 DFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFEGRVSTQWATADDAFLAKLRGVADEI 436 Query: 301 LALYEQREYGKALRAIMEQADVINAYVDANKPWELAKDSTKDVQLHEVCSRLLEAFRILT 360 +LYEQREYGKALR +MEQAD INAYVDANKPWELAKDS +D QLHEVCSRLLEAFRILT Sbjct: 437 RSLYEQREYGKALRLVMEQADAINAYVDANKPWELAKDSARDAQLHEVCSRLLEAFRILT 496 Query: 361 VYLKPVLPQLAAQVEGFLNVAPFTWADVQTALPDGHVINAYAHLMQRVDPKMLDAL 416 VYLKPVLPQLAAQVE FL V PF W DV L DGHVI+AY+HLMQRVDPKMLDAL Sbjct: 497 VYLKPVLPQLAAQVEAFLQVQPFQWGDVAMPLADGHVIHAYSHLMQRVDPKMLDAL 552 >ref|YP_001352802.1| methionyl-tRNA synthetase [Janthinobacterium sp. Marseille] sp|A6SX05.1|SYM_JANMA RecName: Full=Methionyl-tRNA synthetase; AltName: Full=Methionine--tRNA ligase; Short=MetRS gb|ABR88404.1| Methionyl-tRNA synthetase [Janthinobacterium sp. Marseille] Length = 700 Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/416 (83%), Positives = 376/416 (90%) Query: 1 MFLPDRYIKGECPKCGTKDQYGDSCENCSAVYAPTDLKNPYSTLSGATPVMKSSEHFFFK 60 MFLPDRYIKGECPKCGTKDQYGDSCENCSAVYAPTDLK+PYSTL+GATPV KSS+HFFF+ Sbjct: 137 MFLPDRYIKGECPKCGTKDQYGDSCENCSAVYAPTDLKHPYSTLTGATPVRKSSDHFFFR 196 Query: 61 LSDPKCVAFLREWALDNNRLQPEVANKAKEWLDGEGGLGDWDISRDAPYFGIEIPDAPGK 120 LSDPKCVAFLREWALD RLQ EVANKAKEWL+GEGGLGDWDISRDAPYFGIEIPDAPGK Sbjct: 197 LSDPKCVAFLREWALDGQRLQSEVANKAKEWLEGEGGLGDWDISRDAPYFGIEIPDAPGK 256 Query: 121 YFYVWLDAPIGYLASLKNYFGKTGRDFDAFMADDKTEQYHFIGKDITYFHTLFWPAMLKF 180 YFYVWLDAP+GYLA+LKNYF KTGRDFDAFMAD TEQYHFIGKDITYFHTLFWPAMLKF Sbjct: 257 YFYVWLDAPVGYLATLKNYFDKTGRDFDAFMADPSTEQYHFIGKDITYFHTLFWPAMLKF 316 Query: 181 AGRKTPTNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWLRYYIAAKLNAKVEDV 240 A K P NVF HGFITVSGEKMSKSRGTGISPLRYL+IGMNPEWLRYYIAAKL++KVED+ Sbjct: 317 ADMKVPNNVFVHGFITVSGEKMSKSRGTGISPLRYLEIGMNPEWLRYYIAAKLSSKVEDI 376 Query: 241 DFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFDGKLSTAWATADDAFLTKLRGIAPEI 300 DF DDF+ARVN+DLIGKY+NIASRAAGFI K+FDG+++T WAT+DDAFL++LR +A EI Sbjct: 377 DFTSDDFIARVNSDLIGKYINIASRAAGFITKKFDGRVATDWATSDDAFLSRLRNVASEI 436 Query: 301 LALYEQREYGKALRAIMEQADVINAYVDANKPWELAKDSTKDVQLHEVCSRLLEAFRILT 360 ALY+QREYGKALRAIMEQAD INAYVDANKPWELAKD K+ L EVCSRLLEAFRILT Sbjct: 437 QALYDQREYGKALRAIMEQADAINAYVDANKPWELAKDPAKEAALQEVCSRLLEAFRILT 496 Query: 361 VYLKPVLPQLAAQVEGFLNVAPFTWADVQTALPDGHVINAYAHLMQRVDPKMLDAL 416 +YLKPVLP LA QVE LN+AP W + T LP GH IN Y HLM RV+PKMLDAL Sbjct: 497 IYLKPVLPALAKQVEAQLNIAPLEWHHIITPLPHGHQINPYVHLMTRVEPKMLDAL 552 >ref|YP_004754126.1| methionyl-tRNA synthetase [Collimonas fungivorans Ter331] gb|AEK63303.1| Methionyl-tRNA synthetase [Collimonas fungivorans Ter331] Length = 705 Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/420 (81%), Positives = 377/420 (89%), Gaps = 4/420 (0%) Query: 1 MFLPDRYIKGECPKCGTKDQYGDSCENCSAVYAPTDLKNPYSTLSGATPVMKSSEHFFFK 60 MFLPDRYIKGECPKCG KDQYGDSCE CS+VYAPTDL NPYSTL+GATPVMKSSEHFFFK Sbjct: 147 MFLPDRYIKGECPKCGAKDQYGDSCEVCSSVYAPTDLINPYSTLTGATPVMKSSEHFFFK 206 Query: 61 LSDPKCVAFLREWALDNN----RLQPEVANKAKEWLDGEGGLGDWDISRDAPYFGIEIPD 116 LSDP+CV FLR WAL N RLQ EVANKAKEWL+ +GG+GDWDISRDAPYFGIEIPD Sbjct: 207 LSDPQCVEFLRGWALGNADGKPRLQSEVANKAKEWLESDGGMGDWDISRDAPYFGIEIPD 266 Query: 117 APGKYFYVWLDAPIGYLASLKNYFGKTGRDFDAFMADDKTEQYHFIGKDITYFHTLFWPA 176 PGKYFYVWLDAP+GYLASLKNYFGKTGRD+DAFMAD +TEQYHFIGKDITYFHTLFWPA Sbjct: 267 EPGKYFYVWLDAPVGYLASLKNYFGKTGRDYDAFMADPRTEQYHFIGKDITYFHTLFWPA 326 Query: 177 MLKFAGRKTPTNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWLRYYIAAKLNAK 236 ML F+G+K P NVF HGF+TVSGEKMSKSRGTGISPLRYL++GMNPEW+RYYIAAKL+AK Sbjct: 327 MLHFSGQKVPNNVFVHGFLTVSGEKMSKSRGTGISPLRYLELGMNPEWMRYYIAAKLSAK 386 Query: 237 VEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFDGKLSTAWATADDAFLTKLRGI 296 VED+DFNP+DFVARVN+DLIGKY+NIASRAAGFIAK+FDGKLSTAWAT D FL +LRG+ Sbjct: 387 VEDIDFNPEDFVARVNSDLIGKYINIASRAAGFIAKKFDGKLSTAWATDSDPFLARLRGV 446 Query: 297 APEILALYEQREYGKALRAIMEQADVINAYVDANKPWELAKDSTKDVQLHEVCSRLLEAF 356 A +I ALY+ REYGKALRA+MEQAD+INAYVDANKPWELAKD +K+ LHEVCSRLLEAF Sbjct: 447 AADIQALYDGREYGKALRAVMEQADLINAYVDANKPWELAKDPSKEAALHEVCSRLLEAF 506 Query: 357 RILTVYLKPVLPQLAAQVEGFLNVAPFTWADVQTALPDGHVINAYAHLMQRVDPKMLDAL 416 RILT+YLKPVLP LAA+VE FL + P WADV L DGH IN Y HLM RV+PKMLDAL Sbjct: 507 RILTIYLKPVLPALAAEVENFLQIQPLAWADVGQPLADGHKINVYTHLMTRVEPKMLDAL 566 >ref|ZP_08276269.1| Methionyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] gb|EGF30259.1| Methionyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480] Length = 731 Score = 715 bits (1845), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/420 (81%), Positives = 361/420 (85%), Gaps = 4/420 (0%) Query: 1 MFLPDRYIKGECPKCGTKDQYGDSCENCSAVYAPTDLKNPYSTLSGATPVMKSSEHFFFK 60 MFL DRYIKGECPKCG KDQYGDSCE C AVYAPT+LKNPYS LSGA PVMKSSEHFFFK Sbjct: 172 MFLADRYIKGECPKCGAKDQYGDSCEVCGAVYAPTELKNPYSALSGAVPVMKSSEHFFFK 231 Query: 61 LSDPKCVAFLREWALDNNRLQPEVANKAKEWLDG----EGGLGDWDISRDAPYFGIEIPD 116 LSD KCV FLREWA RLQPEVANKA+EWL+G E GLGDWDISRDAPYFGIEIPD Sbjct: 232 LSDHKCVEFLREWAFTEGRLQPEVANKAREWLEGKDDKESGLGDWDISRDAPYFGIEIPD 291 Query: 117 APGKYFYVWLDAPIGYLASLKNYFGKTGRDFDAFMADDKTEQYHFIGKDITYFHTLFWPA 176 APGKYFYVWLDAPIGYLASLKNYF TGRDFDAFMA+ TEQYHFIGKDITYFHTLFWPA Sbjct: 292 APGKYFYVWLDAPIGYLASLKNYFDNTGRDFDAFMANPATEQYHFIGKDITYFHTLFWPA 351 Query: 177 MLKFAGRKTPTNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWLRYYIAAKLNAK 236 ML FAGRK P NVF HGFITVSGEKMSKSRGTGISPLRYLDIGMNPEW+RYYIAAKL+AK Sbjct: 352 MLHFAGRKVPNNVFVHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWMRYYIAAKLSAK 411 Query: 237 VEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFDGKLSTAWATADDAFLTKLRGI 296 VEDVDFNPDDFVARVN+DLIGKYVNIASR+AGFIAKRFDG + T WAT D FL LR + Sbjct: 412 VEDVDFNPDDFVARVNSDLIGKYVNIASRSAGFIAKRFDGHVVTDWATTSDTFLFGLRDV 471 Query: 297 APEILALYEQREYGKALRAIMEQADVINAYVDANKPWELAKDSTKDVQLHEVCSRLLEAF 356 A +I ALY+ REYGKALR IMEQAD +NAYVDANKPWELAK+ D +L EVCSRLLEAF Sbjct: 472 ANDIHALYDGREYGKALRLIMEQADRVNAYVDANKPWELAKNPDNDARLQEVCSRLLEAF 531 Query: 357 RILTVYLKPVLPQLAAQVEGFLNVAPFTWADVQTALPDGHVINAYAHLMQRVDPKMLDAL 416 RILT+YLKPVLP LA QVE L +AP W+DV LP H IN + HLMQRVDPKMLDAL Sbjct: 532 RILTLYLKPVLPALAQQVETMLAIAPLQWSDVSKPLPHQHQINPFVHLMQRVDPKMLDAL 591 >ref|ZP_04577129.1| methionyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] gb|EEO28091.1| methionyl-tRNA synthetase [Oxalobacter formigenes HOxBLS] Length = 695 Score = 669 bits (1727), Expect = 0.0, Method: Compositional matrix adjust. Identities = 315/424 (74%), Positives = 351/424 (82%), Gaps = 8/424 (1%) Query: 1 MFLPDRYIKGECPKCGTKDQYGDSCENCSAVYAPTDLKNPYSTLSGATPVMKSSEHFFFK 60 MFLPDRYIKGECPKCG KDQYGD+CE+CS+VY PT+LKNPYS L+GATPVMK SEHFFFK Sbjct: 137 MFLPDRYIKGECPKCGAKDQYGDTCESCSSVYTPTELKNPYSILTGATPVMKQSEHFFFK 196 Query: 61 LSDPKCVAFLREWALDN----NRLQPEVANKAKEWLDG----EGGLGDWDISRDAPYFGI 112 LSDP+C AFL+EW L N RLQPEVANKA+EWL+G E L DWDISRDAPYFGI Sbjct: 197 LSDPQCTAFLKEWTLGNVDGEPRLQPEVANKAREWLEGKEGEENALSDWDISRDAPYFGI 256 Query: 113 EIPDAPGKYFYVWLDAPIGYLASLKNYFGKTGRDFDAFMADDKTEQYHFIGKDITYFHTL 172 EIPDAPGKYFYVWLDAP+GYLASLKNYF KTG D+DAFMAD +TEQYHFIGKDI YFHTL Sbjct: 257 EIPDAPGKYFYVWLDAPVGYLASLKNYFNKTGGDYDAFMADPETEQYHFIGKDIIYFHTL 316 Query: 173 FWPAMLKFAGRKTPTNVFAHGFITVSGEKMSKSRGTGISPLRYLDIGMNPEWLRYYIAAK 232 FWPAML FA + P NV+ HGFITV GEKMSKSRGTGISPLRYL+IGMNPEWLRYY+AAK Sbjct: 317 FWPAMLHFADMRVPDNVYVHGFITVGGEKMSKSRGTGISPLRYLEIGMNPEWLRYYLAAK 376 Query: 233 LNAKVEDVDFNPDDFVARVNADLIGKYVNIASRAAGFIAKRFDGKLSTAWATADDAFLTK 292 L+ +VED+DF DDF+ARVNADL+GKYVNIASRAAGFI KRF GKL+ W T D L Sbjct: 377 LSDRVEDIDFTGDDFIARVNADLVGKYVNIASRAAGFITKRFGGKLAKDWKTEDTPVLDT 436 Query: 293 LRGIAPEILALYEQREYGKALRAIMEQADVINAYVDANKPWELAKDSTKDVQLHEVCSRL 352 LR + EI LYE+RE+GKALR IM AD +NAYVDANKPW LAKD K LH+VC+RL Sbjct: 437 LRAASGEIAELYEKREFGKALRQIMHLADEVNAYVDANKPWVLAKDPEKSEALHQVCTRL 496 Query: 353 LEAFRILTVYLKPVLPQLAAQVEGFLNVAPFTWADVQTALPDGHVINAYAHLMQRVDPKM 412 LEAFRIL++YLKPVLP ++ +VE FLN+ P W+DV+ L D H IN Y HLMQRVD KM Sbjct: 497 LEAFRILSIYLKPVLPAVSEKVEAFLNLPPLQWSDVEKPLEDSHAINPYEHLMQRVDQKM 556 Query: 413 LDAL 416 LDAL Sbjct: 557 LDAL 560