BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0049.p (257 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08273776.1| Branched-chain amino acid transport protein [... 328 5e-88 ref|ZP_08624248.1| inner-membrane translocator [Acetonema longum... 206 3e-51 ref|YP_003321116.1| inner-membrane translocator [Sphaerobacter t... 202 3e-50 ref|YP_266079.1| branched chain amino acid ABC transporter [Cand... 200 2e-49 ref|ZP_08629118.1| high-affinity branched-chain amino acid trans... 185 6e-45 >ref|ZP_08273776.1| Branched-chain amino acid transport protein [Oxalobacteraceae bacterium IMCC9480] gb|EGF32754.1| Branched-chain amino acid transport protein [Oxalobacteraceae bacterium IMCC9480] Length = 287 Score = 328 bits (841), Expect = 5e-88, Method: Compositional matrix adjust. Identities = 159/192 (82%), Positives = 181/192 (94%) Query: 4 DILLQTLASGLLIGLIYALVAIGLTLIFGVMDIVNFAHGEFLMFGMYSSFWLFALYALDP 63 +IL+QTL SGLLIGLIYALVAIGLT+IFGVMDI+NF+HGEFLMFGMYSSFW+++LYALDP Sbjct: 3 EILVQTLVSGLLIGLIYALVAIGLTMIFGVMDIINFSHGEFLMFGMYSSFWMYSLYALDP 62 Query: 64 IFTLPLTALFLFGLGALLYKLVIRKITNAPMVSQIFTTFGLMILFRGIAQFFWKADFRTI 123 +FTLPLTALFLF LG ++YKLVI KITNAPMVSQIFTTFGLM+LFRGIAQF WK DFRTI Sbjct: 63 MFTLPLTALFLFALGVVVYKLVISKITNAPMVSQIFTTFGLMLLFRGIAQFLWKPDFRTI 122 Query: 124 ENSMVAGHVSLGGIQIGSPQLTAGLGAIVVTGVIYLFLTRTKLGAALEATAADKEAAQLM 183 E SMV+GH SL GIQ+G+PQLTAG+GAI+VT +YLF+T+T+LGAALEATAADKEAA+LM Sbjct: 123 EKSMVSGHFSLAGIQVGTPQLTAGVGAILVTVGVYLFITKTRLGAALEATAADKEAARLM 182 Query: 184 GIDSQKMFALAW 195 GIDSQKMFALAW Sbjct: 183 GIDSQKMFALAW 194 >ref|ZP_08624248.1| inner-membrane translocator [Acetonema longum DSM 6540] gb|EGO64456.1| inner-membrane translocator [Acetonema longum DSM 6540] Length = 291 Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 108/200 (54%), Positives = 144/200 (72%) Query: 1 MTWDILLQTLASGLLIGLIYALVAIGLTLIFGVMDIVNFAHGEFLMFGMYSSFWLFALYA 60 M +LLQT+ASGLL G IYAL+A+GLT+I+GVM+IVNFAHG+F M M+ ++ + Sbjct: 4 MLEGVLLQTVASGLLWGCIYALIALGLTIIYGVMNIVNFAHGDFFMISMFLAYAFSLVLG 63 Query: 61 LDPIFTLPLTALFLFGLGALLYKLVIRKITNAPMVSQIFTTFGLMILFRGIAQFFWKADF 120 L P+ +LPL LF +G + YK +I+ + NAP ++QIF TFGLMI RG+AQF + AD+ Sbjct: 64 LTPLASLPLVTACLFVVGVVSYKGLIKPVLNAPPLAQIFATFGLMIFLRGLAQFIFGADY 123 Query: 121 RTIENSMVAGHVSLGGIQIGSPQLTAGLGAIVVTGVIYLFLTRTKLGAALEATAADKEAA 180 RTI N +G + LGGI + PQL A GA+V+ +YLF+T+T+ G AL A A +K+AA Sbjct: 124 RTISNVAASGRIDLGGIFVAIPQLIAAAGAVVMFVTVYLFITKTRTGWALMAVAENKQAA 183 Query: 181 QLMGIDSQKMFALAWGVGAA 200 LMGID KMFALAWG+GAA Sbjct: 184 ALMGIDGDKMFALAWGLGAA 203 >ref|YP_003321116.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745] gb|ACZ40294.1| inner-membrane translocator [Sphaerobacter thermophilus DSM 20745] Length = 294 Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 107/204 (52%), Positives = 144/204 (70%), Gaps = 4/204 (1%) Query: 1 MTWDILLQTLASGLLIGLIYALVAIGLTLIFGVMDIVNFAHGEFLMFGMYSSFWLFALYA 60 M +LLQ L +GLLIG++YAL+++GLTLIFG+M+IVNFAHGEFLM MY++FW L + Sbjct: 1 MDTTLLLQALTNGLLIGMVYALISVGLTLIFGLMEIVNFAHGEFLMLAMYAAFWASVLLS 60 Query: 61 LDPIFTLPLTALFLFGLGALLYKLVIRKITNAPMVSQIFTTFGLMILFRGIAQFFWKADF 120 LDP+ +LPLT L LG Y+ +I I +APM++QIF TFGL + RG+AQ+ W +F Sbjct: 61 LDPMVSLPLTVGGLGLLGLATYRGIIAHILHAPMLAQIFATFGLGLFLRGLAQYLWTPNF 120 Query: 121 RTIEN----SMVAGHVSLGGIQIGSPQLTAGLGAIVVTGVIYLFLTRTKLGAALEATAAD 176 RTIE + G V++GG+ +G PQ+ A + A V +YLF+TRT++G AL+A A D Sbjct: 121 RTIERPWLGQISGGTVNIGGVFLGVPQIAAAILAGVAFVALYLFITRTRVGLALQAVAED 180 Query: 177 KEAAQLMGIDSQKMFALAWGVGAA 200 K A LMGIDS +MFAL W +G A Sbjct: 181 KSTAGLMGIDSNRMFALGWVLGGA 204 >ref|YP_266079.1| branched chain amino acid ABC transporter [Candidatus Pelagibacter ubique HTCC1062] gb|AAZ21476.1| Branched-chain amino acid transport protein [Candidatus Pelagibacter ubique HTCC1062] Length = 279 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 99/189 (52%), Positives = 136/189 (71%) Query: 10 LASGLLIGLIYALVAIGLTLIFGVMDIVNFAHGEFLMFGMYSSFWLFALYALDPIFTLPL 69 + +GL++GLIYAL+A GL+LIFG+MDIVNFAHGE LM M+SSFWL++L+ LDPIF++P+ Sbjct: 1 MVTGLMMGLIYALIAAGLSLIFGLMDIVNFAHGEHLMLSMFSSFWLWSLFGLDPIFSIPI 60 Query: 70 TALFLFGLGALLYKLVIRKITNAPMVSQIFTTFGLMILFRGIAQFFWKADFRTIENSMVA 129 T L + G L + +IR I A M+ QI TFGL I R IAQF W DFR I+ ++ Sbjct: 61 TILLMAFCGVLTHYFLIRYILKAKMLIQICATFGLSIFIRSIAQFLWTPDFRNIDKPLLE 120 Query: 130 GHVSLGGIQIGSPQLTAGLGAIVVTGVIYLFLTRTKLGAALEATAADKEAAQLMGIDSQK 189 G + + G+ IG PQL A L +V ++YLF+T+T+ G AL+ATA D+ AA+++GI S K Sbjct: 121 GRLEISGMFIGQPQLIASLVCLVAFILLYLFVTKTETGLALQATAQDRHAAEILGIPSDK 180 Query: 190 MFALAWGVG 198 MFA+ W +G Sbjct: 181 MFAIGWAIG 189 >ref|ZP_08629118.1| high-affinity branched-chain amino acid transport system permease [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08477.1| high-affinity branched-chain amino acid transport system permease [Bradyrhizobiaceae bacterium SG-6C] Length = 292 Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 102/204 (50%), Positives = 138/204 (67%), Gaps = 4/204 (1%) Query: 1 MTWDILLQTLASGLLIGLIYALVAIGLTLIFGVMDIVNFAHGEFLMFGMYSSFWLFALYA 60 MT LQ +ASGLL+GLIYAL+A+GL+LIFG+MD+VNFAHGEFLM MY++F L + A Sbjct: 1 MTTQAFLQVIASGLLMGLIYALIAVGLSLIFGLMDVVNFAHGEFLMLAMYATFGLVFMTA 60 Query: 61 LDPIFTLPLTALFLFGLGALLYKLVIRKITNA---PMVSQIFTTFGLMILFRGIAQFFWK 117 LDP+ PL +F LG +Y VIR A P + QIF TFGL +L +G+AQ+F+ Sbjct: 61 LDPVVLAPLVVALMFVLGVSVYAGVIRYAMRAKANPGMVQIFATFGLALLIQGLAQYFFT 120 Query: 118 ADFRTIENSMVAGH-VSLGGIQIGSPQLTAGLGAIVVTGVIYLFLTRTKLGAALEATAAD 176 D+R I N+ + G ++LGG+ + PQ+ G ++ V G +Y +TRT G ALEAT D Sbjct: 121 PDYRNIANTWLGGKTLNLGGVFLPWPQIFGGAVSLAVFGGLYWLITRTDFGKALEATRED 180 Query: 177 KEAAQLMGIDSQKMFALAWGVGAA 200 + A L+GID ++FAL WG+GAA Sbjct: 181 QGAVALVGIDRNRVFALGWGLGAA 204