BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0037.p (397 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776479.1| sugar ABC transporter periplasmic protein [H... 630 e-178 ref|NP_879023.1| extracellular solute-binding protein [Bordetell... 535 e-150 ref|NP_891467.1| glycerol-3-phosphate ABC transporter substrate-... 535 e-150 ref|NP_886475.1| extracellular solute-binding protein [Bordetell... 531 e-149 ref|YP_003976210.1| extracellular solute-binding family protein ... 527 e-147 >ref|YP_003776479.1| sugar ABC transporter periplasmic protein [Herbaspirillum seropedicae SmR1] gb|ADJ64571.1| ABC-type sugar transport system, periplasmic component protein [Herbaspirillum seropedicae SmR1] Length = 430 Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust. Identities = 305/369 (82%), Positives = 333/369 (90%) Query: 1 MRRVILKSIAALAVAGAFAAPAFAANPVELTFYYPVAVGGPITKTIDGMVADFEKQNPDV 60 MRR +LKS+AALAV+ AF P AANPVE++FYYPVAVGG +TKTID MVADFEK +PD+ Sbjct: 1 MRRTVLKSLAALAVSAAFCTPVLAANPVEISFYYPVAVGGAVTKTIDSMVADFEKAHPDI 60 Query: 61 KIKAVYAGTYQESIVKALTAFKSGTPPTLAVLLSTDLFTLIDENAIVPIDGLANKPEDKK 120 K+KA+YAGTYQESIVKALTAFK GTPPTLAVLLSTDLFTLIDENAI+PID LA+ EDKK Sbjct: 61 KVKAIYAGTYQESIVKALTAFKGGTPPTLAVLLSTDLFTLIDENAILPIDSLASSAEDKK 120 Query: 121 WIEGFYKGFMENSQTGGKTWGIPFQRSTIVMFWNKNLFKEAGLNPDKAPANWADTITYAK 180 WI GFYKGFMENSQT GKTWGIPFQRSTIVM++NK LFKEAGLNPDKAPANW + + AK Sbjct: 121 WIAGFYKGFMENSQTEGKTWGIPFQRSTIVMYYNKALFKEAGLNPDKAPANWNEMVEAAK 180 Query: 181 KLTKSDANGNVSQWGLKIPSTGFTYWMFQGLTTPNDTTLMNAAGTKTYFDKPAAVESLQY 240 KLTK DA GNV+QWG+KIPSTGF YWMFQ +T NDT LMN+AGTKTYFDKP AV++LQ+ Sbjct: 181 KLTKRDAAGNVTQWGVKIPSTGFGYWMFQAMTASNDTLLMNSAGTKTYFDKPGAVQALQH 240 Query: 241 WVDLSARHKVMPGGVIEWGTTPKDFLEQKAAMVWTTTGNLTNIRANASFPFGVAMLPANK 300 WVDL+ + KVMP G IEWGTTPKDFLEQKAAMVWTTTGNLTNIR NASFPFGVAMLP K Sbjct: 241 WVDLTTKEKVMPAGSIEWGTTPKDFLEQKAAMVWTTTGNLTNIRTNASFPFGVAMLPGIK 300 Query: 301 HPGSPTGGGNFYVFNKTSPEQQQAAVKFIRFATEPARAAQWSIATGYVAPRQDAWDTPEM 360 HPGSPTGGGNFYVFNKTSP +QQAA+KFIRFATEPARAAQWSIATGYVAPRQDAWDTPEM Sbjct: 301 HPGSPTGGGNFYVFNKTSPAEQQAAMKFIRFATEPARAAQWSIATGYVAPRQDAWDTPEM 360 Query: 361 KKYLQEVPA 369 KKYLQ+VPA Sbjct: 361 KKYLQDVPA 369 >ref|NP_879023.1| extracellular solute-binding protein [Bordetella pertussis Tohama I] emb|CAE40501.1| probable extracellular solute-binding protein [Bordetella pertussis Tohama I] gb|AEE65627.1| extracellular solute-binding protein [Bordetella pertussis CS] Length = 430 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 255/372 (68%), Positives = 297/372 (79%), Gaps = 1/372 (0%) Query: 1 MRRVILKSIAALAVAGAFAAPAFAANPVELTFYYPVAVGGPITKTIDGMVADFEKQNPDV 60 MRR++LK++AA A PA A PVE+ FYYPVAVGGPITK +D MVADF K+NPD+ Sbjct: 1 MRRIVLKTLAAGLAGAFLALPAQAQQPVEVEFYYPVAVGGPITKIVDDMVADFHKENPDI 60 Query: 61 KIKAVYAGTYQESIVKALTAFKSGTPPTLAVLLSTDLFTLIDENAIVPIDGLANKPEDKK 120 +IK +YAGTYQ+SI KALTA K GTPP LAVLLSTD+FTLIDE+AIVP+DGLA DKK Sbjct: 61 RIKPIYAGTYQDSIAKALTALKGGTPPQLAVLLSTDMFTLIDEDAIVPVDGLAKSDADKK 120 Query: 121 WIEGFYKGFMENSQTGGKTWGIPFQRSTIVMFWNKNLFKEAGLNPDKAPANWADTITYAK 180 W+ GFY FM+NS+TGG WG+PFQRSTIVM++NK+LFKEAGL+P++APA W + + Y K Sbjct: 121 WLGGFYDAFMQNSRTGGHVWGVPFQRSTIVMYYNKDLFKEAGLDPERAPATWDELVEYGK 180 Query: 181 KLTKSDANGNVSQWGLKIPSTG-FTYWMFQGLTTPNDTTLMNAAGTKTYFDKPAAVESLQ 239 KLTK DANGNVSQWG+KIPS G F YW+FQ LTTPND LMN G++ Y DKPA VE+ Q Sbjct: 181 KLTKKDANGNVSQWGIKIPSGGAFAYWLFQALTTPNDAILMNEEGSQVYLDKPAVVEAAQ 240 Query: 240 YWVDLSARHKVMPGGVIEWGTTPKDFLEQKAAMVWTTTGNLTNIRANASFPFGVAMLPAN 299 +W DLS +H VMP G I+WGTTPKDFLE+KAA+VWTTTGNLTNIR NA FPFGVAM+P Sbjct: 241 FWQDLSVKHGVMPKGTIDWGTTPKDFLEKKAAIVWTTTGNLTNIRKNADFPFGVAMMPKK 300 Query: 300 KHPGSPTGGGNFYVFNKTSPEQQQAAVKFIRFATEPARAAQWSIATGYVAPRQDAWDTPE 359 K GSPTGGGNFY+F +P QQQAA+KF ++AT P RAA WSIATGYVA AW T Sbjct: 301 KRGGSPTGGGNFYIFKSGTPAQQQAALKFAQWATTPERAADWSIATGYVAVTPAAWQTER 360 Query: 360 MKKYLQEVPAXT 371 MKKY QEVPA T Sbjct: 361 MKKYAQEVPAAT 372 >ref|NP_891467.1| glycerol-3-phosphate ABC transporter substrate-binding protein [Bordetella bronchiseptica RB50] emb|CAE35297.1| probable extracellular solute-binding protein [Bordetella bronchiseptica RB50] Length = 430 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 255/372 (68%), Positives = 297/372 (79%), Gaps = 1/372 (0%) Query: 1 MRRVILKSIAALAVAGAFAAPAFAANPVELTFYYPVAVGGPITKTIDGMVADFEKQNPDV 60 MRR++LK++AA A PA A PVE+ FYYPVAVGGPITK +D MVADF K+NPD+ Sbjct: 1 MRRIVLKTLAAGLAGAFLALPAQAQQPVEVEFYYPVAVGGPITKIVDDMVADFHKENPDI 60 Query: 61 KIKAVYAGTYQESIVKALTAFKSGTPPTLAVLLSTDLFTLIDENAIVPIDGLANKPEDKK 120 +IK +YAGTYQ+SI KALTA K GTPP LAVLLSTD+FTLIDE+AIVP+DGLA DKK Sbjct: 61 RIKPIYAGTYQDSIAKALTALKGGTPPQLAVLLSTDMFTLIDEDAIVPVDGLAKSDADKK 120 Query: 121 WIEGFYKGFMENSQTGGKTWGIPFQRSTIVMFWNKNLFKEAGLNPDKAPANWADTITYAK 180 W+ GFY FM+NS+TGG WG+PFQRSTIVM++NK+LFKEAGL+P++APA W + + Y K Sbjct: 121 WLGGFYDAFMQNSRTGGHVWGVPFQRSTIVMYYNKDLFKEAGLDPERAPATWDELVEYGK 180 Query: 181 KLTKSDANGNVSQWGLKIPSTG-FTYWMFQGLTTPNDTTLMNAAGTKTYFDKPAAVESLQ 239 KLTK DANGNVSQWG+KIPS G F YW+FQ LTTPND LMN G++ Y DKPA VE+ Q Sbjct: 181 KLTKKDANGNVSQWGVKIPSGGAFAYWLFQALTTPNDAILMNEEGSQVYLDKPAVVEAAQ 240 Query: 240 YWVDLSARHKVMPGGVIEWGTTPKDFLEQKAAMVWTTTGNLTNIRANASFPFGVAMLPAN 299 +W DLS +H VMP G I+WGTTPKDFLE+KAA+VWTTTGNLTNIR NA FPFGVAM+P Sbjct: 241 FWQDLSVKHGVMPKGTIDWGTTPKDFLEKKAAIVWTTTGNLTNIRKNADFPFGVAMMPKK 300 Query: 300 KHPGSPTGGGNFYVFNKTSPEQQQAAVKFIRFATEPARAAQWSIATGYVAPRQDAWDTPE 359 K GSPTGGGNFY+F +P QQQAA+KF ++AT P RAA WSIATGYVA AW T Sbjct: 301 KRGGSPTGGGNFYIFKSGTPAQQQAALKFAQWATTPERAADWSIATGYVAVTPAAWQTER 360 Query: 360 MKKYLQEVPAXT 371 MKKY QEVPA T Sbjct: 361 MKKYAQEVPAAT 372 >ref|NP_886475.1| extracellular solute-binding protein [Bordetella parapertussis 12822] emb|CAE39626.1| probable extracellular solute-binding protein [Bordetella parapertussis] Length = 430 Score = 531 bits (1368), Expect = e-149, Method: Compositional matrix adjust. Identities = 253/372 (68%), Positives = 295/372 (79%), Gaps = 1/372 (0%) Query: 1 MRRVILKSIAALAVAGAFAAPAFAANPVELTFYYPVAVGGPITKTIDGMVADFEKQNPDV 60 MRR++LK++AA A PA A PVE+ FYYPVAVGGPITK +D MVADF K+NPD+ Sbjct: 1 MRRIVLKTLAAGLAGAFLALPAQAQQPVEVEFYYPVAVGGPITKIVDDMVADFHKENPDI 60 Query: 61 KIKAVYAGTYQESIVKALTAFKSGTPPTLAVLLSTDLFTLIDENAIVPIDGLANKPEDKK 120 +IK +YAGTYQ+SI KALTA K GTPP LAVLLSTD+FTLIDE+AIVP+DGLA DKK Sbjct: 61 RIKPIYAGTYQDSIAKALTALKGGTPPQLAVLLSTDMFTLIDEDAIVPVDGLAKSDADKK 120 Query: 121 WIEGFYKGFMENSQTGGKTWGIPFQRSTIVMFWNKNLFKEAGLNPDKAPANWADTITYAK 180 W+ GFY M+NS+TGG WG+PFQRSTIVM++NK+LFKEAGL+P++APA W + + Y K Sbjct: 121 WLGGFYDAVMQNSRTGGHVWGVPFQRSTIVMYYNKDLFKEAGLDPERAPATWDELVEYGK 180 Query: 181 KLTKSDANGNVSQWGLKIPSTG-FTYWMFQGLTTPNDTTLMNAAGTKTYFDKPAAVESLQ 239 KLTK DANGNVSQWG+KIPS G F YW+FQ LTTPND LMN G++ Y DKPA VE+ Q Sbjct: 181 KLTKKDANGNVSQWGVKIPSGGAFAYWLFQALTTPNDAILMNEEGSQVYLDKPAVVEAAQ 240 Query: 240 YWVDLSARHKVMPGGVIEWGTTPKDFLEQKAAMVWTTTGNLTNIRANASFPFGVAMLPAN 299 +W DLS +H VMP G I+WGTTPKDFLE+KAA+VWTTTGNLTNIR NA FPFGVAM+P Sbjct: 241 FWQDLSVKHGVMPKGTIDWGTTPKDFLEKKAAIVWTTTGNLTNIRKNADFPFGVAMMPKK 300 Query: 300 KHPGSPTGGGNFYVFNKTSPEQQQAAVKFIRFATEPARAAQWSIATGYVAPRQDAWDTPE 359 K GSPTGGGNFY+F +P QQQAA+KF ++AT P RA WSIATGYVA AW T Sbjct: 301 KRGGSPTGGGNFYIFKSGTPAQQQAALKFAQWATTPERATDWSIATGYVAVTPAAWQTER 360 Query: 360 MKKYLQEVPAXT 371 MKKY QEVPA T Sbjct: 361 MKKYAQEVPAAT 372 >ref|YP_003976210.1| extracellular solute-binding family protein [Achromobacter xylosoxidans A8] gb|ADP13495.1| bacterial extracellular solute-binding family protein 2 [Achromobacter xylosoxidans A8] Length = 431 Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust. Identities = 253/371 (68%), Positives = 299/371 (80%), Gaps = 2/371 (0%) Query: 1 MRRVILKSIAALAVAGAFAAPAFAAN-PVELTFYYPVAVGGPITKTIDGMVADFEKQNPD 59 MRR++LK++AA A + PA A N PVE+ FYYPVAVGGPITK +D MVADF+K+NPD Sbjct: 1 MRRIVLKTLAASLAAACLSLPAQAQNKPVEVEFYYPVAVGGPITKIVDDMVADFQKENPD 60 Query: 60 VKIKAVYAGTYQESIVKALTAFKSGTPPTLAVLLSTDLFTLIDENAIVPIDGLANKPEDK 119 +KIK +YAG+YQ+SI KALTA K GTPP LAVLLSTD+FTLIDE+AIVPID LA DK Sbjct: 61 IKIKPIYAGSYQDSIAKALTALKGGTPPQLAVLLSTDMFTLIDEDAIVPIDSLAKSDADK 120 Query: 120 KWIEGFYKGFMENSQTGGKTWGIPFQRSTIVMFWNKNLFKEAGLNPDKAPANWADTITYA 179 KW+ GFY FM+NS++GG TWG+PFQRSTIVM++NKNLFK AGL+P++APA WA+ + Y Sbjct: 121 KWLGGFYDAFMQNSRSGGHTWGVPFQRSTIVMYYNKNLFKAAGLDPERAPATWAELVEYG 180 Query: 180 KKLTKSDANGNVSQWGLKIPSTG-FTYWMFQGLTTPNDTTLMNAAGTKTYFDKPAAVESL 238 KKLTK DA+GN +QWG++IPS G F YW+FQ LTTPN LMN AG + Y DKPA VE+ Sbjct: 181 KKLTKQDASGNTTQWGIEIPSGGAFAYWLFQALTTPNGAILMNEAGNEVYLDKPAVVEAA 240 Query: 239 QYWVDLSARHKVMPGGVIEWGTTPKDFLEQKAAMVWTTTGNLTNIRANASFPFGVAMLPA 298 QYW DLSA+HK+MP G I+WGTTPKDFLE+KAA+VWTTTGNLTNIR NA FPFGVAM+P Sbjct: 241 QYWRDLSAKHKIMPTGTIDWGTTPKDFLEKKAAIVWTTTGNLTNIRKNADFPFGVAMMPQ 300 Query: 299 NKHPGSPTGGGNFYVFNKTSPEQQQAAVKFIRFATEPARAAQWSIATGYVAPRQDAWDTP 358 K GSPTGGGNFY+F +P QQQAA+KF ++ T P RAA WSIATGYVA AW T Sbjct: 301 QKRGGSPTGGGNFYIFKSGTPAQQQAALKFAQWVTTPERAADWSIATGYVAVTPAAWQTE 360 Query: 359 EMKKYLQEVPA 369 +MKKY QEVPA Sbjct: 361 KMKKYAQEVPA 371