BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0022.p         (104 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_159305.1| transmembrane ABC transporter protein,permease ...   131   4e-29
ref|YP_002890724.1| transporter permease [Thauera sp. MZ1T] >gi|...   128   2e-28
ref|ZP_08276042.1| ABC-type Fe3+-siderophore transport system pe...   127   5e-28
ref|YP_004754134.1| Fe3+-siderophore ABC transporter permease [C...   127   5e-28
ref|YP_287228.1| transport system permease protein [Dechloromona...   126   1e-27

>ref|YP_159305.1| transmembrane ABC transporter protein,permease [Aromatoleum
           aromaticum EbN1]
 emb|CAI08404.1| probable transmembrane ABC transporter protein, permease
           [Aromatoleum aromaticum EbN1]
          Length = 326

 Score =  131 bits (329), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/101 (72%), Positives = 84/101 (83%)

Query: 2   LGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALAG 61
           LGV V RLR      ASL TAAAVTL G++GFVGL+VPH +R ++GNDQRVLLPAA LAG
Sbjct: 224 LGVRVERLRYLLYVLASLLTAAAVTLIGSVGFVGLIVPHLVRFVIGNDQRVLLPAAMLAG 283

Query: 62  GAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARS 102
           G  LTLAD AARTV+APMQLPVGV+TALIGVP+FL+LL+R 
Sbjct: 284 GTLLTLADTAARTVIAPMQLPVGVLTALIGVPVFLFLLSRH 324


>ref|YP_002890724.1| transporter permease [Thauera sp. MZ1T]
 gb|ACR02347.1| transport system permease protein [Thauera sp. MZ1T]
          Length = 343

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/101 (73%), Positives = 85/101 (84%)

Query: 2   LGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALAG 61
           LGV V  LRVA    ASL TA AVTL G++GFVGLVVPH +RL +GNDQRVL+PAAALAG
Sbjct: 238 LGVRVGHLRVALYVLASLLTATAVTLVGSVGFVGLVVPHLVRLALGNDQRVLIPAAALAG 297

Query: 62  GAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARS 102
           G  LTLAD AARTV+AP QLPVGV+TALIGVP+FL+LL+R+
Sbjct: 298 GTLLTLADTAARTVMAPQQLPVGVLTALIGVPVFLFLLSRN 338


>ref|ZP_08276042.1| ABC-type Fe3+-siderophore transport system permease component
           [Oxalobacteraceae bacterium IMCC9480]
 gb|EGF30492.1| ABC-type Fe3+-siderophore transport system permease component
           [Oxalobacteraceae bacterium IMCC9480]
          Length = 322

 Score =  127 bits (320), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/104 (76%), Positives = 88/104 (84%)

Query: 1   LLGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALA 60
           LLGVPV+RLR  TL  AS+ATAAAV +AGTIGFVGLVVPH LRLL GNDQR+LLPA AL 
Sbjct: 219 LLGVPVLRLRALTLLVASVATAAAVAVAGTIGFVGLVVPHALRLLFGNDQRLLLPACALG 278

Query: 61  GGAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARSRA 104
           GG  L LADL ART+VAP QLPVGVITAL+GVP+FL+LL R RA
Sbjct: 279 GGIALVLADLLARTIVAPTQLPVGVITALVGVPVFLFLLQRGRA 322


>ref|YP_004754134.1| Fe3+-siderophore ABC transporter permease [Collimonas fungivorans
           Ter331]
 gb|AEK63311.1| ABC-type Fe3+-siderophore transport system permease component
           [Collimonas fungivorans Ter331]
          Length = 328

 Score =  127 bits (319), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/104 (82%), Positives = 96/104 (92%)

Query: 1   LLGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALA 60
           LLGVPV+RLR+ TLCAASLATAAAVT+AGTIGF+GLVVPH +RLLVGNDQR+LLPA+ L 
Sbjct: 225 LLGVPVLRLRLLTLCAASLATAAAVTVAGTIGFIGLVVPHAIRLLVGNDQRILLPASVLT 284

Query: 61  GGAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARSRA 104
           GGA L LADLAART VAP QLPVGVITAL+GVP+FLWLLARSR+
Sbjct: 285 GGAALALADLAARTAVAPTQLPVGVITALVGVPVFLWLLARSRS 328


>ref|YP_287228.1| transport system permease protein [Dechloromonas aromatica RCB]
 gb|AAZ48758.1| transport system permease protein [Dechloromonas aromatica RCB]
          Length = 325

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/101 (70%), Positives = 83/101 (82%)

Query: 2   LGVPVVRLRVATLCAASLATAAAVTLAGTIGFVGLVVPHGLRLLVGNDQRVLLPAAALAG 61
           LGV V RLR A    ASLATAA+VT AG+IGFVGLVVPH +RL  GNDQR+LLPA+ LAG
Sbjct: 223 LGVAVGRLRYAIYLLASLATAASVTTAGSIGFVGLVVPHLVRLATGNDQRLLLPASVLAG 282

Query: 62  GAGLTLADLAARTVVAPMQLPVGVITALIGVPLFLWLLARS 102
           G+ L LAD  ART++AP QLPVGV+TALIGVP+FL+LL+R 
Sbjct: 283 GSLLVLADTLARTLIAPQQLPVGVLTALIGVPVFLFLLSRQ 323