BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0012.p (257 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776490.1| permease [Herbaspirillum seropedicae SmR1] >... 422 e-116 ref|YP_004754153.1| hypothetical protein CFU_3506 [Collimonas fu... 382 e-104 gb|ABW82977.1| permease [uncultured bacterium pEAF66] 368 e-100 ref|YP_001354141.1| hypothetical protein mma_2451 [Janthinobacte... 356 2e-96 ref|YP_001100643.1| hypothetical protein HEAR2391 [Herminiimonas... 355 3e-96 >ref|YP_003776490.1| permease [Herbaspirillum seropedicae SmR1] gb|ADJ64582.1| permease transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 257 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 230/257 (89%), Positives = 244/257 (94%) Query: 1 MTVSYVVSGFAVGVLVGLTGVGGGSLMTPLLTLLFGIHPSVAVGTDLAFASATKTAGTFA 60 MTVSYVVSGFAVG+LVGLTGVGGGSLMTPLLTLLFGIHPSVAVGTDLAFASATKTAGT A Sbjct: 1 MTVSYVVSGFAVGLLVGLTGVGGGSLMTPLLTLLFGIHPSVAVGTDLAFASATKTAGTLA 60 Query: 61 HRFKGTVRWDIVRRLCYGALPAAIVTTLLLKHFGAVSDGISLVIRYSIAISVFLTVIALL 120 HRFKGTVRWD+VRRL YGALPAA++TTLLLKHFGAVSDGI+L IRYSIA+SVFLTVIALL Sbjct: 61 HRFKGTVRWDVVRRLSYGALPAALITTLLLKHFGAVSDGIALTIRYSIAVSVFLTVIALL 120 Query: 121 FKSKLQDWLNAHPERQLQGLKLARATILAGAVLGALVTISSIGAGAVGATLLVLLYPRLS 180 F+S++Q WLNAHP+RQLQG LA ATI AGA+LG LVTISSIGAGAVGATLLVLLYPRLS Sbjct: 121 FRSRMQAWLNAHPQRQLQGATLANATIAAGALLGTLVTISSIGAGAVGATLLVLLYPRLS 180 Query: 181 PAEVAGTDIAYAVPLTAIAAFGHWWLGSIDWSLLGALLLGSVPGITIGSLAARAVPEKFL 240 PAE+AGTDIAYAVPLTAIAA GHWWLGSI+W LL LLLGSVPGITIGSLAARAVPEKFL Sbjct: 181 PAEIAGTDIAYAVPLTAIAALGHWWLGSINWELLATLLLGSVPGITIGSLAARAVPEKFL 240 Query: 241 RGLLAITLTSVALKLIW 257 RGLLAITLTSVA+KLIW Sbjct: 241 RGLLAITLTSVAVKLIW 257 >ref|YP_004754153.1| hypothetical protein CFU_3506 [Collimonas fungivorans Ter331] gb|AEK63330.1| hypothetical protein CFU_3506 [Collimonas fungivorans Ter331] Length = 257 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 214/257 (83%), Positives = 231/257 (89%) Query: 1 MTVSYVVSGFAVGVLVGLTGVGGGSLMTPLLTLLFGIHPSVAVGTDLAFASATKTAGTFA 60 MTVSYVVSGFAVG+LVGLTGVGGGSLMTP+LTLLFGIHPSVAVGTDLAFAS TK AGT A Sbjct: 1 MTVSYVVSGFAVGLLVGLTGVGGGSLMTPILTLLFGIHPSVAVGTDLAFASVTKVAGTVA 60 Query: 61 HRFKGTVRWDIVRRLCYGALPAAIVTTLLLKHFGAVSDGISLVIRYSIAISVFLTVIALL 120 HR +GTVRWDIVR L GALPAA+ T L LK+ G +S I VIRYSIA+SV LTV+ALL Sbjct: 61 HRSRGTVRWDIVRLLSLGALPAAVATALALKYLGGISAEIGQVIRYSIAVSVLLTVVALL 120 Query: 121 FKSKLQDWLNAHPERQLQGLKLARATILAGAVLGALVTISSIGAGAVGATLLVLLYPRLS 180 FK KLQ WLNAHPE+ LQG KL ATI AG VLGALVT+SSIGAGAVGAT+LVLLYPRL+ Sbjct: 121 FKGKLQHWLNAHPEKHLQGRKLTAATIFAGLVLGALVTMSSIGAGAVGATILVLLYPRLT 180 Query: 181 PAEVAGTDIAYAVPLTAIAAFGHWWLGSIDWSLLGALLLGSVPGITIGSLAARAVPEKFL 240 PAEVAGTDIAYAVPLTAIAA GHWWLGSIDW+LLGALLLGSVPGIT+GSLAARAVPEKFL Sbjct: 181 PAEVAGTDIAYAVPLTAIAALGHWWLGSIDWNLLGALLLGSVPGITLGSLAARAVPEKFL 240 Query: 241 RGLLAITLTSVALKLIW 257 RGLLA+TLTSVA+KLI+ Sbjct: 241 RGLLALTLTSVAVKLIY 257 >gb|ABW82977.1| permease [uncultured bacterium pEAF66] Length = 257 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 190/257 (73%), Positives = 218/257 (84%) Query: 1 MTVSYVVSGFAVGVLVGLTGVGGGSLMTPLLTLLFGIHPSVAVGTDLAFASATKTAGTFA 60 M ++Y+VSGFAVG+LVG+TGVGGGSLMTPLLTL+FG+ PSVAVGTDLAFAS TK+AG F Sbjct: 1 MLITYIVSGFAVGLLVGMTGVGGGSLMTPLLTLIFGVPPSVAVGTDLAFASITKSAGAFT 60 Query: 61 HRFKGTVRWDIVRRLCYGALPAAIVTTLLLKHFGAVSDGISLVIRYSIAISVFLTVIALL 120 HR +GTVRWDIV+ LC GALPAA+ T L LK +GA+ I IRYSIA SV LTV+AL+ Sbjct: 61 HRLRGTVRWDIVKLLCIGALPAAVATALALKQYGALDASIGQFIRYSIAGSVLLTVVALI 120 Query: 121 FKSKLQDWLNAHPERQLQGLKLARATILAGAVLGALVTISSIGAGAVGATLLVLLYPRLS 180 FK K+ WLNAHPERQLQG L AT+ AG LG LVTISSIGAGA+GATLLV+LYPRLS Sbjct: 121 FKGKMLAWLNAHPERQLQGRALDAATVFAGLGLGVLVTISSIGAGAIGATLLVMLYPRLS 180 Query: 181 PAEVAGTDIAYAVPLTAIAAFGHWWLGSIDWSLLGALLLGSVPGITIGSLAARAVPEKFL 240 AEVAGTDIAYAVPLTAIAAFGHWWLGSI+W+LL LL+GS+PGIT+GS A++VPEKFL Sbjct: 181 AAEVAGTDIAYAVPLTAIAAFGHWWLGSINWTLLAMLLVGSLPGITLGSWIAKSVPEKFL 240 Query: 241 RGLLAITLTSVALKLIW 257 R LLA+TLT VA KLI+ Sbjct: 241 RVLLAMTLTGVAAKLIY 257 >ref|YP_001354141.1| hypothetical protein mma_2451 [Janthinobacterium sp. Marseille] gb|ABR90559.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 257 Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 191/257 (74%), Positives = 226/257 (87%) Query: 1 MTVSYVVSGFAVGVLVGLTGVGGGSLMTPLLTLLFGIHPSVAVGTDLAFASATKTAGTFA 60 M+V+Y+VSGFAVG+LVGLTGVGGGSLMTPLLTLLFG+ P+VAVGTDLAFAS TK AGTFA Sbjct: 1 MSVTYIVSGFAVGLLVGLTGVGGGSLMTPLLTLLFGVSPTVAVGTDLAFASTTKIAGTFA 60 Query: 61 HRFKGTVRWDIVRRLCYGALPAAIVTTLLLKHFGAVSDGISLVIRYSIAISVFLTVIALL 120 HR+KG V W+IV++LC GALPAA++TTL+LK+ G + I VIRYSIA SV LTVIAL+ Sbjct: 61 HRYKGNVHWNIVKQLCIGALPAAVLTTLVLKYLGGLDKEIGQVIRYSIAGSVMLTVIALI 120 Query: 121 FKSKLQDWLNAHPERQLQGLKLARATILAGAVLGALVTISSIGAGAVGATLLVLLYPRLS 180 F+++LQ+W++AHP RQ G KL ATI++GA+LG LVTISSIGAGA+GAT+LVLLYPRL+ Sbjct: 121 FRTRLQNWMSAHPNRQFHGKKLVTATIVSGAILGTLVTISSIGAGAIGATILVLLYPRLT 180 Query: 181 PAEVAGTDIAYAVPLTAIAAFGHWWLGSIDWSLLGALLLGSVPGITIGSLAARAVPEKFL 240 PAE+AGTDIAYAVPLTAIAA GHWWLGSI W LL LLLGSVPGIT+GSLA+RA+PEK L Sbjct: 181 PAEIAGTDIAYAVPLTAIAALGHWWLGSIHWELLAMLLLGSVPGITLGSLASRAIPEKVL 240 Query: 241 RGLLAITLTSVALKLIW 257 R LLA TLT+VA KL++ Sbjct: 241 RVLLATTLTTVAFKLVY 257 >ref|YP_001100643.1| hypothetical protein HEAR2391 [Herminiimonas arsenicoxydans] emb|CAL62522.1| Putative permease [Herminiimonas arsenicoxydans] Length = 257 Score = 355 bits (912), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 191/257 (74%), Positives = 225/257 (87%) Query: 1 MTVSYVVSGFAVGVLVGLTGVGGGSLMTPLLTLLFGIHPSVAVGTDLAFASATKTAGTFA 60 M+VSY+VSGFAVG+LVGLTGVGGGSLMTPLLTLLFG+ P+VAVGTDLAFASATK AGTFA Sbjct: 1 MSVSYIVSGFAVGLLVGLTGVGGGSLMTPLLTLLFGVSPTVAVGTDLAFASATKVAGTFA 60 Query: 61 HRFKGTVRWDIVRRLCYGALPAAIVTTLLLKHFGAVSDGISLVIRYSIAISVFLTVIALL 120 HR++G V W IV+ LC GALPAA++TTL LK+FG + I +IRYSIA SV LTVIAL+ Sbjct: 61 HRYRGNVHWHIVKHLCLGALPAAVLTTLTLKYFGVLDQEIGQIIRYSIAGSVMLTVIALI 120 Query: 121 FKSKLQDWLNAHPERQLQGLKLARATILAGAVLGALVTISSIGAGAVGATLLVLLYPRLS 180 F++++Q W+NAHP RQ+QG KL ATI++GA+LG LVTISSIGAGA+GAT+LVLLYPRL+ Sbjct: 121 FRTRMQHWMNAHPGRQIQGEKLVVATIVSGAILGTLVTISSIGAGAIGATILVLLYPRLT 180 Query: 181 PAEVAGTDIAYAVPLTAIAAFGHWWLGSIDWSLLGALLLGSVPGITIGSLAARAVPEKFL 240 PAE+AGTDIAYAVPLTAIAA GHWWLGSI+W LL LLLGSVPGIT+GSL AR +PEK L Sbjct: 181 PAEIAGTDIAYAVPLTAIAALGHWWLGSINWELLAMLLLGSVPGITLGSLVARTIPEKVL 240 Query: 241 RGLLAITLTSVALKLIW 257 R LLA LT+VA+KL++ Sbjct: 241 RVLLASVLTTVAVKLVY 257