BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0003.p         (123 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003776498.1| hypothetical protein Hsero_3106 [Herbaspiril...   168   2e-40
ref|YP_001354148.1| hypothetical protein mma_2458 [Janthinobacte...   158   3e-37
ref|YP_001100650.1| putative sirohydrochlorin cobaltochelatase [...   158   3e-37
ref|ZP_08274547.1| Sirohydrochlorin cobaltochelatase [Oxalobacte...   154   5e-36
ref|YP_621734.1| cobalamin (vitamin B12) biosynthesis CbiX prote...   148   3e-34

>ref|YP_003776498.1| hypothetical protein Hsero_3106 [Herbaspirillum seropedicae SmR1]
 gb|ADJ64590.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
          Length = 121

 Score =  168 bits (426), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 75/118 (63%), Positives = 97/118 (82%)

Query: 3   KSLILFAHGARDPNWAEPFKRLRAMTQANLPNVAVELAFLELMTPDLPQLAAQQIADGAQ 62
           +SLILFAHGARDP WA PF+RLRA+T+A +P  +VELAFLELM PDLP + AQQ+A G+Q
Sbjct: 2   QSLILFAHGARDPAWAAPFERLRALTRAAMPQASVELAFLELMQPDLPSVVAQQVAAGSQ 61

Query: 63  QVTIVPVFLGQGGHVRRDLPVLIDQLRRDHPGVNFQVAAAAGEDDGVLQALAQYCISS 120
           ++T++PVFLGQGGHVRRDLP L++QLR+ HP    +   A GED+ VLQA+A YC+++
Sbjct: 62  RITVIPVFLGQGGHVRRDLPQLLEQLRQAHPQAEIRTVPAVGEDEAVLQAIAAYCVAA 119


>ref|YP_001354148.1| hypothetical protein mma_2458 [Janthinobacterium sp. Marseille]
 gb|ABR90431.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 123

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 93/119 (78%)

Query: 2   KKSLILFAHGARDPNWAEPFKRLRAMTQANLPNVAVELAFLELMTPDLPQLAAQQIADGA 61
           K++LILFAHGARDP WAEPF+RL+A+ +A  P + VELAFLELMTP LP+L A+    G 
Sbjct: 3   KRALILFAHGARDPRWAEPFQRLQALVKAQSPELVVELAFLELMTPRLPELMAELAQAGV 62

Query: 62  QQVTIVPVFLGQGGHVRRDLPVLIDQLRRDHPGVNFQVAAAAGEDDGVLQALAQYCISS 120
            +VT+VPVFLGQGGHVR DLP ++D+L+  +P V+F +  A GE++ VLQA+A YC+ +
Sbjct: 63  TEVTVVPVFLGQGGHVRADLPSIVDELKLQYPAVSFTIVEAVGENEQVLQAMASYCLGT 121


>ref|YP_001100650.1| putative sirohydrochlorin cobaltochelatase [Herminiimonas
           arsenicoxydans]
 emb|CAL62529.1| Putative cobalamin (Vitamin B12) biosynthesis CbiX protein
           [Herminiimonas arsenicoxydans]
          Length = 125

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 70/119 (58%), Positives = 95/119 (79%)

Query: 2   KKSLILFAHGARDPNWAEPFKRLRAMTQANLPNVAVELAFLELMTPDLPQLAAQQIADGA 61
           +++L+LFAHGARDP WAEPF+RL++  +   P + V LAFLELM+P LP+L    IADG 
Sbjct: 5   RRALVLFAHGARDPRWAEPFQRLQSAVKMQSPGLTVALAFLELMSPRLPELLPALIADGI 64

Query: 62  QQVTIVPVFLGQGGHVRRDLPVLIDQLRRDHPGVNFQVAAAAGEDDGVLQALAQYCISS 120
           +++TIVPVFLGQGGHVRRDLP+L+D+L+  +P V+F++A A GED  VLQA+A YC+ +
Sbjct: 65  EEITIVPVFLGQGGHVRRDLPLLVDELKTLYPDVSFRIAGAVGEDAQVLQAMATYCLGT 123


>ref|ZP_08274547.1| Sirohydrochlorin cobaltochelatase [Oxalobacteraceae bacterium
           IMCC9480]
 gb|EGF31986.1| Sirohydrochlorin cobaltochelatase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 123

 Score =  154 bits (389), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 74/121 (61%), Positives = 91/121 (75%)

Query: 2   KKSLILFAHGARDPNWAEPFKRLRAMTQANLPNVAVELAFLELMTPDLPQLAAQQIADGA 61
           +K+LILFAHGAR   WA PF+RL+ M  A LP VAV LAFLELMTP LP+  A  +ADG 
Sbjct: 3   QKALILFAHGARAAGWAAPFERLQQMASAQLPEVAVRLAFLELMTPQLPETMAALVADGR 62

Query: 62  QQVTIVPVFLGQGGHVRRDLPVLIDQLRRDHPGVNFQVAAAAGEDDGVLQALAQYCISSS 121
             VTIVPVFLGQG H+ RDLP+++D+LR  +P +  +VAAAAGE+  VL A+A+YCI S 
Sbjct: 63  SDVTIVPVFLGQGSHLLRDLPLIVDELRTSYPQIQIRVAAAAGENLEVLNAIARYCIVSM 122

Query: 122 G 122
           G
Sbjct: 123 G 123


>ref|YP_621734.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Burkholderia
           cenocepacia AU 1054]
 ref|YP_836112.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Burkholderia
           cenocepacia HI2424]
 ref|YP_001765757.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Burkholderia
           cenocepacia MC0-3]
 gb|ABF76761.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Burkholderia
           cenocepacia AU 1054]
 gb|ABK09219.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Burkholderia
           cenocepacia HI2424]
 gb|ACA91635.1| cobalamin (vitamin B12) biosynthesis CbiX protein [Burkholderia
           cenocepacia MC0-3]
          Length = 127

 Score =  148 bits (373), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 84/122 (68%), Gaps = 1/122 (0%)

Query: 2   KKSLILFAHGARDPNWAEPFKRLRA-MTQANLPNVAVELAFLELMTPDLPQLAAQQIADG 60
              ++LF HGARDP WAEPF+RL A +  A  P   V LAFLELMTP L +  A Q+A G
Sbjct: 3   SHGIVLFGHGARDPRWAEPFERLAARLRGAGSPATHVSLAFLELMTPSLGEAVAAQVAAG 62

Query: 61  AQQVTIVPVFLGQGGHVRRDLPVLIDQLRRDHPGVNFQVAAAAGEDDGVLQALAQYCISS 120
             ++T+VPVF GQGGHVRRDLP L+D  R  HPGV  + A A GEDDGVL A+A+YCI  
Sbjct: 63  CARITVVPVFFGQGGHVRRDLPQLVDACRAAHPGVEIRCATAVGEDDGVLDAVARYCIDQ 122

Query: 121 SG 122
            G
Sbjct: 123 LG 124