BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0002.p (377 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776499.1| permease [Herbaspirillum seropedicae SmR1] >... 556 e-156 ref|YP_004754165.1| hypothetical protein CFU_3518 [Collimonas fu... 503 e-140 ref|YP_001100651.1| hypothetical protein HEAR2399 [Herminiimonas... 475 e-132 ref|YP_001354149.1| hypothetical protein mma_2459 [Janthinobacte... 466 e-129 ref|ZP_04575897.1| permease YjgP/YjgQ family protein [Oxalobacte... 439 e-121 >ref|YP_003776499.1| permease [Herbaspirillum seropedicae SmR1] gb|ADJ64591.1| permease transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 376 Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust. Identities = 283/378 (74%), Positives = 321/378 (84%), Gaps = 5/378 (1%) Query: 1 MRVLQRYITTEIVRSVAFALAAFLALFAFFEMMGQLEAVGRNGYQLQNAVLYVIMGLPGN 60 MRV+QRY T+EI RSV FALAAFLALFAFFEMMGQLE VGRNGY+LQ AV YV+MGLPGN Sbjct: 1 MRVIQRYFTSEITRSVLFALAAFLALFAFFEMMGQLEQVGRNGYKLQQAVFYVLMGLPGN 60 Query: 61 VYELMPIAVLIGTIYALAQFAASSEFTIMRVSSMSTRMTAKALAKIGLGFAIVTILFGEL 120 VYELMP AVLIGTIY L+Q AA SEFTIMRVSSMST A+ LA+IG+GFA++TI+FGEL Sbjct: 61 VYELMPTAVLIGTIYTLSQLAARSEFTIMRVSSMSTGQAARVLARIGVGFAVLTIVFGEL 120 Query: 121 VAPKATELGEKIKLQAQGSSLSQQFRSGLWAKDVIKSNGLEGDVIGTRFLNIQRIQTDGG 180 +APKATE EK+KLQAQG+SLS QFRSG+WAKDVI+ +GLEG+V+G+RF+NI+ +Q DG Sbjct: 121 IAPKATEWAEKLKLQAQGASLSSQFRSGMWAKDVIRDHGLEGNVVGSRFINIRTVQPDGR 180 Query: 181 LEGVKIYELDKDFHLSDLIVAAHGDYQGNHTWQLSDVQKTTFI--VDKKVSAITAPISTE 238 +EGVK+YELD DFH++ ++ A G Y GNH W LSDV ++ F D+K IT P+ T Sbjct: 181 IEGVKLYELDSDFHMARMVTAKAGMYDGNHQWTLSDVVQSDFTGGSDRK---ITEPVKTV 237 Query: 239 KIKTVNFVSEVTPEILSVLFADPDRMSAYDLRAYTKHLEANNQRTERYEIAFWKKIVYPL 298 K + VSEVTPEILSVLFADPDRMSAYDL AYTKHLEANNQRT+RYEIAFWKKIVYPL Sbjct: 238 KSAQLTLVSEVTPEILSVLFADPDRMSAYDLLAYTKHLEANNQRTDRYEIAFWKKIVYPL 297 Query: 299 SIFVMMGLALPFAYLHFRTGGVSLKIFTGIMIGVSFQLINNLFSHLGLLNTWPALVTAAL 358 SIFVM+ LALPFAYLHFR GGVSLKIFTGIMIGV FQLIN+LFSHLGLLNTWPA VTAAL Sbjct: 298 SIFVMLALALPFAYLHFRAGGVSLKIFTGIMIGVCFQLINSLFSHLGLLNTWPAFVTAAL 357 Query: 359 PSTLFMLMALVALRWVER 376 PS LFM +A AL WVER Sbjct: 358 PSLLFMALAAGALWWVER 375 >ref|YP_004754165.1| hypothetical protein CFU_3518 [Collimonas fungivorans Ter331] gb|AEK63342.1| putative Membrane protein; putative permease [Collimonas fungivorans Ter331] Length = 379 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 250/378 (66%), Positives = 311/378 (82%), Gaps = 2/378 (0%) Query: 1 MRVLQRYITTEIVRSVAFALAAFLALFAFFEMMGQLEAVGRNGYQLQNAVLYVIMGLPGN 60 M+VLQRY T+EIVRSV F LAAFLALFAFF++M +L +VGR GY+LQ+A +V++GLP Sbjct: 1 MKVLQRYFTSEIVRSVLFTLAAFLALFAFFDLMNELPSVGRGGYKLQHAFFFVLLGLPSY 60 Query: 61 VYELMPIAVLIGTIYALAQFAASSEFTIMRVSSMSTRMTAKALAKIGLGFAIVTILFGEL 120 YELMPIA LIGTIY L+QFAA SEFTIMRVSSMST MTAK L KIGL F I T+L GE Sbjct: 61 AYELMPIAALIGTIYTLSQFAARSEFTIMRVSSMSTMMTAKILIKIGLLFVIATVLIGEF 120 Query: 121 VAPKATELGEKIKLQAQGSSLSQQFRSGLWAKDVIKS--NGLEGDVIGTRFLNIQRIQTD 178 V+PK+ E EK+KL+A+GSS+SQ+F++GLW+KDVI++ +G GD++G+RF+NI I+ D Sbjct: 121 VSPKSAEFAEKVKLEARGSSISQKFKTGLWSKDVIRAGADGASGDIVGSRFINIGEIRPD 180 Query: 179 GGLEGVKIYELDKDFHLSDLIVAAHGDYQGNHTWQLSDVQKTTFIVDKKVSAITAPISTE 238 G L GVK+YE D++ H++ LI+AAH +YQG HTW+++DV +T F+ IT I+T+ Sbjct: 181 GQLVGVKLYEFDRNLHMTSLILAAHAEYQGKHTWRMADVVQTDFVNGTSTEDITTAIATK 240 Query: 239 KIKTVNFVSEVTPEILSVLFADPDRMSAYDLRAYTKHLEANNQRTERYEIAFWKKIVYPL 298 K + + VSE+TPEILSVLFADPD MSAY+L +Y++HL NNQ TERY+IAFWKK+VYPL Sbjct: 241 KFPSKDLVSEITPEILSVLFADPDHMSAYNLWSYSQHLAENNQHTERYDIAFWKKLVYPL 300 Query: 299 SIFVMMGLALPFAYLHFRTGGVSLKIFTGIMIGVSFQLINNLFSHLGLLNTWPALVTAAL 358 S+FVMM LALPFAYLHFRTGGVSLKIFTGIMIGVSFQL+N LFSHLGLLNTWP TAAL Sbjct: 301 SVFVMMALALPFAYLHFRTGGVSLKIFTGIMIGVSFQLVNTLFSHLGLLNTWPPFFTAAL 360 Query: 359 PSTLFMLMALVALRWVER 376 PST+F+L+A+ AL +ER Sbjct: 361 PSTIFLLIAIGALWKIER 378 >ref|YP_001100651.1| hypothetical protein HEAR2399 [Herminiimonas arsenicoxydans] emb|CAL62530.1| putative permease [Herminiimonas arsenicoxydans] Length = 382 Score = 475 bits (1222), Expect = e-132, Method: Compositional matrix adjust. Identities = 231/382 (60%), Positives = 289/382 (75%), Gaps = 5/382 (1%) Query: 1 MRVLQRYITTEIVRSVAFALAAFLALFAFFEMMGQLEAVGRNGYQLQNAVLYVIMGLPGN 60 M++LQ+Y EI RSV F L AFLALF FF+++ +L+AVG GY++Q+A+L+V++ +PG Sbjct: 1 MKILQKYFAAEIGRSVIFVLIAFLALFGFFDLIAELKAVGHGGYKIQHALLFVLLSMPGY 60 Query: 61 VYELMPIAVLIGTIYALAQFAASSEFTIMRVSSMSTRMTAKALAKIGLGFAIVTILFGEL 120 +YELMPIA LIGTI+ L+QFAA SEFTIMR SSMST M L KIGL FAIVT + GE Sbjct: 61 LYELMPIAALIGTIWTLSQFAARSEFTIMRASSMSTGMAGLMLIKIGLVFAIVTFVVGEF 120 Query: 121 VAPKATELGEKIKLQAQGSSLSQQFRSGLWAKDVIKSNGLEGDVIGTRFLNIQRIQTDGG 180 V P ++ + EKI+ QG SLSQ+FRSGLW KD+I+SNG +G+ IG+RFLN++ +Q DG Sbjct: 121 VVPASSNMAEKIRTLNQGGSLSQEFRSGLWTKDMIRSNGKDGEAIGSRFLNVRTVQPDGQ 180 Query: 181 LEGVKIYELDKDFHLSDLIVAAHGDYQGNHTWQLSDVQKTTFIVDKKVSA-----ITAPI 235 L +KIYE +++FHL+ LI AA DYQG++ W LS+ + F + + A IT I Sbjct: 181 LTDLKIYEFNRNFHLTALITAARADYQGDNVWLLSNGSQAEFGETELMGAAVATDITTAI 240 Query: 236 STEKIKTVNFVSEVTPEILSVLFADPDRMSAYDLRAYTKHLEANNQRTERYEIAFWKKIV 295 ST + +SEVTPEILSV F+DP +MSAYDL YT++L NN+ T RYEIA WKK+V Sbjct: 241 STRNFASKPLISEVTPEILSVGFSDPAKMSAYDLVNYTQYLAENNRETARYEIALWKKVV 300 Query: 296 YPLSIFVMMGLALPFAYLHFRTGGVSLKIFTGIMIGVSFQLINNLFSHLGLLNTWPALVT 355 YP ++FVMM LALPFAYLHFR+GGVSLKIFTGIMIGVSFQLIN+LFSHLGLLNTWP T Sbjct: 301 YPFAVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVSFQLINSLFSHLGLLNTWPPFAT 360 Query: 356 AALPSTLFMLMALVALRWVERR 377 A LPS LF+L A+ AL WVER Sbjct: 361 AILPSLLFLLAAIGALLWVERH 382 >ref|YP_001354149.1| hypothetical protein mma_2459 [Janthinobacterium sp. Marseille] gb|ABR89987.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 382 Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust. Identities = 230/382 (60%), Positives = 290/382 (75%), Gaps = 5/382 (1%) Query: 1 MRVLQRYITTEIVRSVAFALAAFLALFAFFEMMGQLEAVGRNGYQLQNAVLYVIMGLPGN 60 M++LQ+Y + EI RSV F L AFLALFAFF+++G+L++VG GY++Q+A LYV++ +PG Sbjct: 1 MKILQKYFSLEIGRSVLFVLIAFLALFAFFDLVGELKSVGHGGYKIQHAFLYVVLEMPGY 60 Query: 61 VYELMPIAVLIGTIYALAQFAASSEFTIMRVSSMSTRMTAKALAKIGLGFAIVTILFGEL 120 VYELMPIA LIGTI+AL+QFAA SEFTIMR SSMST M L KIG+ FA++T +FGE Sbjct: 61 VYELMPIAALIGTIWALSQFAARSEFTIMRASSMSTAMVGAILLKIGVVFALITFVFGEF 120 Query: 121 VAPKATELGEKIKLQAQGSSLSQQFRSGLWAKDVIKSNGLEGDVIGTRFLNIQRIQTDGG 180 V P + + E+I++ +QG +LSQ+FRSGLW KDVI+SNG EG+V+G+RF+N++ ++ DG Sbjct: 121 VVPITSNMAERIRVNSQGGALSQEFRSGLWTKDVIRSNGQEGEVLGSRFVNVRELRPDGK 180 Query: 181 LEGVKIYELDKDFHLSDLIVAAHGDYQGNHTWQLSDVQKTTFIVDK-----KVSAITAPI 235 L +KIYE +++FHL+ LI A DY G +TW L+D F K + IT I Sbjct: 181 LMNLKIYEFNRNFHLTSLITAGSADYAGANTWTLNDGTVAAFGESKLQGATTATDITTAI 240 Query: 236 STEKIKTVNFVSEVTPEILSVLFADPDRMSAYDLRAYTKHLEANNQRTERYEIAFWKKIV 295 ST K KT + VSE+TPEILSV F DP MSA L YT++L NN+ T RYEIA WKK+V Sbjct: 241 STSKFKTQSLVSEMTPEILSVGFTDPATMSAIALVNYTQYLSENNRDTVRYEIALWKKVV 300 Query: 296 YPLSIFVMMGLALPFAYLHFRTGGVSLKIFTGIMIGVSFQLINNLFSHLGLLNTWPALVT 355 YP ++FVMM LALPFAYLHFR+GGVSLKIFTGIMIGVSFQLIN+LFSHLGLLNTWP T Sbjct: 301 YPFAVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVSFQLINSLFSHLGLLNTWPPFAT 360 Query: 356 AALPSTLFMLMALVALRWVERR 377 A LPS LF+ +A+ AL WVER Sbjct: 361 AILPSLLFLTVAVGALMWVERH 382 >ref|ZP_04575897.1| permease YjgP/YjgQ family protein [Oxalobacter formigenes HOxBLS] gb|EEO26859.1| permease YjgP/YjgQ family protein [Oxalobacter formigenes HOxBLS] Length = 382 Score = 439 bits (1129), Expect = e-121, Method: Compositional matrix adjust. Identities = 205/382 (53%), Positives = 277/382 (72%), Gaps = 5/382 (1%) Query: 1 MRVLQRYITTEIVRSVAFALAAFLALFAFFEMMGQLEAVGRNGYQLQNAVLYVIMGLPGN 60 M++LQRY ++IV+SV F L AFL LFAFF+++ +L +VGR GYQL + +Y+++G PG Sbjct: 1 MKILQRYFFSQIVKSVVFILVAFLGLFAFFDLISELSSVGRGGYQLHHVFVYILLGFPGY 60 Query: 61 VYELMPIAVLIGTIYALAQFAASSEFTIMRVSSMSTRMTAKALAKIGLGFAIVTILFGEL 120 +YELMP AVLIGTIYA+A FA++SEFTIMRVSS+STR LAK+GL F + T L GE+ Sbjct: 61 IYELMPFAVLIGTIYAMALFASNSEFTIMRVSSLSTRDACWMLAKVGLVFLVFTFLVGEV 120 Query: 121 VAPKATELGEKIKLQAQGSSLSQQFRSGLWAKDVIKSNGLEGDVIGTRFLNIQRIQTDGG 180 + P + + + + G +LS +FR+G+W+KD I+ NG EG++IG+RF+NI+ ++ DG Sbjct: 121 LTPYTSRMASEFRNNLIGRNLSDKFRTGMWSKDTIRENGREGEIIGSRFMNIKTMRPDGT 180 Query: 181 LEGVKIYELDKDFHLSDLIVAAHGDYQGNHTWQLSDVQKTTFIVDKKVSAITAP-----I 235 +E +K+YE +++ L + A +G Y GNH WQL+ V ++ K P + Sbjct: 181 IEQIKLYEFNRELELVKTVTAQNGHYLGNHEWQLNGVVESLIKSSGKSKGKRFPDSAPVV 240 Query: 236 STEKIKTVNFVSEVTPEILSVLFADPDRMSAYDLRAYTKHLEANNQRTERYEIAFWKKIV 295 TEK ++ VS+VTP+ILSV+ D ++MSAY+L Y +HL N Q Y+IAFWKKI+ Sbjct: 241 DTEKRDSIRLVSDVTPDILSVISVDANKMSAYELAVYNRHLVENKQDATSYQIAFWKKII 300 Query: 296 YPLSIFVMMGLALPFAYLHFRTGGVSLKIFTGIMIGVSFQLINNLFSHLGLLNTWPALVT 355 YP S+FVMM LALPFAYLHFR+GGVSLKIFTGIMIGV+F LINNLFSH+GLLNTWP +T Sbjct: 301 YPFSVFVMMALALPFAYLHFRSGGVSLKIFTGIMIGVAFILINNLFSHVGLLNTWPPFLT 360 Query: 356 AALPSTLFMLMALVALRWVERR 377 A +PS LF+L A+ AL WVER Sbjct: 361 AVIPSVLFLLSAVFALWWVERH 382