BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0103.p (364 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01857620.1| beta-lactamase [Planctomyces maris DSM 8797] ... 244 1e-62 ref|YP_003756321.1| beta-lactamase [Hyphomicrobium denitrificans... 205 1e-50 ref|ZP_02189215.1| methylmalonyl-CoA mutase [alpha proteobacteri... 201 2e-49 ref|ZP_03129115.1| beta-lactamase [Chthoniobacter flavus Ellin42... 188 1e-45 ref|YP_004675124.1| beta-lactamase [Hyphomicrobium sp. MC1] >gi|... 187 2e-45 >ref|ZP_01857620.1| beta-lactamase [Planctomyces maris DSM 8797] gb|EDL56550.1| beta-lactamase [Planctomyces maris DSM 8797] Length = 389 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 120/237 (50%), Positives = 167/237 (70%), Gaps = 3/237 (1%) Query: 46 LTSYLVQYKLPALAAAVVQDGRIIAAGAVGTRKVGSGIAVTVNDRFHIGSDTKAFTATLA 105 L YL LPA+AAAVV G + G VGTRK+G+ I VT++D+FH+GSD KA TAT+A Sbjct: 30 LEPYLKSGNLPAVAAAVVDRGVLTEYGVVGTRKMGADIPVTIHDKFHLGSDGKAMTATIA 89 Query: 106 GILVDRGAMAWTTTLGDAFPELAPKMDPDFRRITISQLLSHTSGIPADNAEFLELLAKSM 165 G++++ G + W +TLGD FPEL M P ++T+ QLLSHTSG+ AD+ ++LL S Sbjct: 90 GMMIEEGKLKWDSTLGDVFPELKKTMAPGVEKVTLEQLLSHTSGMRADDENLMKLLKDSF 149 Query: 166 FEEGNLDDLRYWTLQQWMSKPLPVQPGQRGQHFAYSNLGYTIAGAMIERVARKSWEELIN 225 +G+L+D RYW L++ + PL +P + +AY+N GYTIAGAMIERV+ K+W+ELI Sbjct: 150 DVDGDLNDQRYWLLKESVKLPLVAEPSKA---WAYNNRGYTIAGAMIERVSGKAWDELIV 206 Query: 226 ESIFDPMELKSAGLGSQATLGRVDAALGHVLVGEDIAKPFMAGPGDDNPQLIAPAXS 282 E IF+P EL +AGLG+Q+TLG++DA LGHV+ + K +MAGP DN ++ PA + Sbjct: 207 ERIFEPFELTTAGLGTQSTLGKIDAPLGHVVQKDGKVKSYMAGPNADNSLILGPAGT 263 >ref|YP_003756321.1| beta-lactamase [Hyphomicrobium denitrificans ATCC 51888] gb|ADJ24000.1| beta-lactamase [Hyphomicrobium denitrificans ATCC 51888] Length = 406 Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 108/229 (47%), Positives = 144/229 (62%), Gaps = 2/229 (0%) Query: 52 QYKLPALAAAVVQDGRIIAAGAVGTRKVGSGIAVTVNDRFHIGSDTKAFTATLAGILVDR 111 QY+LPAL AA+V+DG+I+A GAVG R +G I VT +DRFH+GSD KA TATLAG+L+D Sbjct: 49 QYQLPALGAAIVKDGKIVAQGAVGVRVLGMDIPVTQDDRFHLGSDGKAMTATLAGMLIDE 108 Query: 112 GAMAWTTTLGDAFPELAPKMDPDFRRITISQLLSHTSGIPADNAEFLELLAKSMFEEGNL 171 G + W +T+G+ + P + P F IT+ QLLSHTSGIP+D + ++L S + L Sbjct: 109 GKLRWDSTIGEVLGPVVPDLKPKFAAITLEQLLSHTSGIPSDTEDIMKLYFSSDAFDYTL 168 Query: 172 DDLRYWTLQQWMSKPLPVQPGQRGQHFAYSNLGYTIAGAMIERVARKSWEELINESIFDP 231 R + +W + P G F YSNLGY I G+MIE+ + K WE LI IF+P Sbjct: 169 TAYRLRMISEWNAAHDLSVP--SGSAFQYSNLGYAIVGSMIEQASGKPWEVLITTRIFEP 226 Query: 232 MELKSAGLGSQATLGRVDAALGHVLVGEDIAKPFMAGPGDDNPQLIAPA 280 + LKSAGLG QAT G+ DAA+GH + + P G D P ++ PA Sbjct: 227 LGLKSAGLGPQATFGKYDAAVGHSVDADGKVTPRPWGLSADGPAVVGPA 275 >ref|ZP_02189215.1| methylmalonyl-CoA mutase [alpha proteobacterium BAL199] gb|EDP64174.1| methylmalonyl-CoA mutase [alpha proteobacterium BAL199] Length = 389 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 109/215 (50%), Positives = 143/215 (66%), Gaps = 5/215 (2%) Query: 42 LEPTLTSYLVQYKLPALAAAVVQDGRIIAAGAVGTRKVGSGIAVTVNDRFHIGSDTKAFT 101 L+ TL +++LPALAAAVV+ G I+AAGAVG R +GSGIAVT++DRFH+GSDTKA T Sbjct: 28 LDATLEPVRAEHQLPALAAAVVKGGEIVAAGAVGERALGSGIAVTIDDRFHLGSDTKAMT 87 Query: 102 ATLAGILVDRGAMAWTTTLGDAFPELAPKMDPDFRRITISQLLSHTSGIPADNAEFLELL 161 ATLA +LV+ G + W++T+G+ P M P+ +T+ QLLSH+SGIP D AE + L Sbjct: 88 ATLAAMLVEEGRLRWSSTVGETIGAAFPGMVPELAAVTLEQLLSHSSGIPGDTAEMMNLY 147 Query: 162 AK-SMFEEGNLDDLRYWTLQQWMSKPLPVQPGQRGQHFAYSNLGYTIAGAMIERVARKSW 220 F+ G R + W +K +PV+P G F YSNLGY IAG MIE + W Sbjct: 148 FNVDAFDHGP-SARRLRVIDAWKTK-VPVKPA--GSPFQYSNLGYLIAGTMIEAASGHPW 203 Query: 221 EELINESIFDPMELKSAGLGSQATLGRVDAALGHV 255 E LI + +FDP+ L +AGLGS TLGR+DAA H+ Sbjct: 204 ERLIRDRLFDPLGLATAGLGSTVTLGRLDAAAAHM 238 >ref|ZP_03129115.1| beta-lactamase [Chthoniobacter flavus Ellin428] gb|EDY20356.1| beta-lactamase [Chthoniobacter flavus Ellin428] Length = 369 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 110/258 (42%), Positives = 158/258 (61%), Gaps = 19/258 (7%) Query: 55 LPALAAAVVQDGRIIAAGAVGTRKVGSGIAVTVNDRFHIGSDTKAFTATLAGILVDRGAM 114 LPALAAA ++ G+++ A G RK+GS VT +D++H+GS TK+ TA LAG++VD G + Sbjct: 35 LPALAAAAMRHGKLVINAATGVRKLGSDELVTTDDKWHLGSCTKSMTAMLAGMMVDEGKL 94 Query: 115 AWTTTLGDAFPELAPKMDPDFRRITISQLLSHTSGIPADNAEFLELLAKSMFEEGNLDDL 174 +W TT+G+ FP+L M P +R +T+ QLL+H SG P + +EL A+++ ++G + Sbjct: 95 SWHTTIGEVFPDLNGAMRPSWRNVTLDQLLTHRSGAPGNPP--VELWAEALEQKGTPTEQ 152 Query: 175 RYWTLQQWMSKPLPVQPGQRGQHFAYSNLGYTIAGAMIERVARKSWEELINESIFDPMEL 234 R L+ + P P P G+ F YSN GY IAGAMIERV ++WE+L+ E IF+P+ + Sbjct: 153 RLAILRGIVCNP-PEAP--HGKKFIYSNEGYAIAGAMIERVTGEAWEDLMRERIFEPLGM 209 Query: 235 KSAGLGSQATLGRVDAALGHV-LVGEDIAKPFMAGPGDDNPQLIAPAXS----------- 282 SAG G+ AT G++D GH+ VGE +P GP DNP IAPA + Sbjct: 210 TSAGFGAPATPGKIDQPWGHLGEVGE--LRPVPPGPMADNPPAIAPAATVHASLADFARY 267 Query: 283 GAGHADRRQVRPRLGDRE 300 HAD ++ PRL E Sbjct: 268 ADWHADWKRAEPRLLTEE 285 >ref|YP_004675124.1| beta-lactamase [Hyphomicrobium sp. MC1] emb|CCB64550.1| Beta-lactamase [Hyphomicrobium sp. MC1] Length = 386 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 108/239 (45%), Positives = 145/239 (60%), Gaps = 2/239 (0%) Query: 42 LEPTLTSYLVQYKLPALAAAVVQDGRIIAAGAVGTRKVGSGIAVTVNDRFHIGSDTKAFT 101 L+ L +Y LP+LAAAVV+DG+++A GAVG R + I VT++DR+H+GSDTKA T Sbjct: 24 LDALLDPIRTKYALPSLAAAVVKDGKLVAVGAVGVRVAETTIPVTIDDRYHLGSDTKAMT 83 Query: 102 ATLAGILVDRGAMAWTTTLGDAFPELAPKMDPDFRRITISQLLSHTSGIPADNAEFLELL 161 ATLA ++V+ G ++W +T+G+ P + P F IT+ +LLSHTSGIP DN E +L Sbjct: 84 ATLAAMMVEEGKLSWNSTIGEVLGSDLPNLKPKFAAITLKELLSHTSGIPTDNEEIGKLY 143 Query: 162 AKSMFEEGNLDDLRYWTLQQWMSKPLPVQPGQRGQHFAYSNLGYTIAGAMIERVARKSWE 221 + E L D R + W SK P P F YSNLGY AGAMIE+ A K WE Sbjct: 144 FSADAYEHTLKDWRLHMIDAWGSKHDPSFPAS--GKFQYSNLGYITAGAMIEKAAGKPWE 201 Query: 222 ELINESIFDPMELKSAGLGSQATLGRVDAALGHVLVGEDIAKPFMAGPGDDNPQLIAPA 280 L+ E I++P+ L +AGLG+QAT G DA +GH + + P G D P + PA Sbjct: 202 RLMYERIYEPLGLSTAGLGAQATFGLYDAPVGHRIEADGEITPMAWGESADLPASLGPA 260