BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0026.0096.p         (168 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003774872.1| hypothetical protein Hsero_1448 [Herbaspiril...   101   3e-20

>ref|YP_003774872.1| hypothetical protein Hsero_1448 [Herbaspirillum seropedicae SmR1]
 gb|ADJ62964.1| hypothetical protein Hsero_1448 [Herbaspirillum seropedicae SmR1]
          Length = 146

 Score =  101 bits (252), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/180 (39%), Positives = 94/180 (52%), Gaps = 58/180 (32%)

Query: 7   DNSIPLLTEVI-----------------APPAAPE--NQAPQALQWEDTQPQQPHPQPDY 47
           DNSIPLLTEVI                 APPA P   +  P A  ++ T P  P      
Sbjct: 5   DNSIPLLTEVIPLAPAAPAHTPARAPDYAPPARPGAFHTQPAATSYQATPPGAPI----- 59

Query: 48  QQHFQPEPIQAFQPQYQPTYDAAPLPVSVSTPLPPQPFAPEPSAEQLRQLRQDIQENVMQ 107
                                 APLPV+             P+AEQ RQ  Q+I+ENV+Q
Sbjct: 60  ---------------------VAPLPVT-------------PAAEQYRQWEQEIRENVLQ 85

Query: 108 TLLGQIDNVLHQHLQDHLAVILDNMADILKTRVRASLEQALAETVTQALAEEMAKFENAK 167
           +LL Q+D VL Q LQD +A++LDN++ +L  R++ SL +ALAETVT+A+AEEMA+F + K
Sbjct: 86  SLLEQVDTVLQQQLQDQMALVLDNLSTVLTQRIKDSLHEALAETVTRAVAEEMARFASTK 145