BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0077.p (289 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_003776728.1| sugar ABC transporter permease [Herbaspirill... 533 e-150 ref|YP_004417114.1| binding-protein-dependent transport systems ... 464 e-129 ref|YP_004157653.1| binding-protein-dependent transport systems ... 452 e-125 ref|ZP_03529067.1| binding-protein-dependent transport systems i... 447 e-123 ref|YP_002277989.1| binding-protein-dependent transport systems ... 446 e-123 >ref|YP_003776728.1| sugar ABC transporter permease [Herbaspirillum seropedicae SmR1] gb|ADJ64820.1| ABC-type sugar transport system, permease component protein [Herbaspirillum seropedicae SmR1] Length = 299 Score = 533 bits (1374), Expect = e-150, Method: Compositional matrix adjust. Identities = 268/289 (92%), Positives = 282/289 (97%) Query: 1 VLGMLFMAPAVLLLVVFLTYPLGLGIWLGFTDTKIGGEGSFIGLDNYSYLLGDSLAQLSL 60 VLGMLFMAPAV+LLVVFLTYPLGLGIWLGFTDTKIGGEGSFIGLDN++YL GDSLAQLSL Sbjct: 11 VLGMLFMAPAVILLVVFLTYPLGLGIWLGFTDTKIGGEGSFIGLDNFTYLAGDSLAQLSL 70 Query: 61 FNTLFYTITASILKFVLGLWLAILLNKNLPLKSFFRAIVLLPWIVPTALSALAFWWMYDS 120 FNT+FYT++ASILKF+LGLWLAILLNKN+PLK+FFRAIVLLPWIVPTALSALAFWW+YD+ Sbjct: 71 FNTVFYTVSASILKFMLGLWLAILLNKNVPLKTFFRAIVLLPWIVPTALSALAFWWLYDA 130 Query: 121 QFSVISWALVKMGLIDHYIDFLGEPWLARISTVVANVWRGIPFVAISLLAGLQTISPSLY 180 QFSVISWAL KMGLID YIDFLG+PW AR STV ANVWRGIPFVAISLLAGLQTISPSLY Sbjct: 131 QFSVISWALHKMGLIDRYIDFLGDPWNARWSTVFANVWRGIPFVAISLLAGLQTISPSLY 190 Query: 181 EAAAIDGAKPWQQFRYVTLPLLTPIIAVVMTFSVLFTFTDFQLIYVLTRGGPLNATHLMA 240 EAAAIDGA PWQQFR+VTLPLLTPIIAVVMTFSVLFTFTDFQLIYVLTRGGPLNATHLMA Sbjct: 191 EAAAIDGATPWQQFRHVTLPLLTPIIAVVMTFSVLFTFTDFQLIYVLTRGGPLNATHLMA 250 Query: 241 TLSFQRAIPGGSLGEGAALATYMIPFLLAAIMFSYFGLQRRGWQQGGDK 289 TLSFQRAIPGG+LGEGAALATYMIPFLLAAIMFSYFGLQRRGWQQGGDK Sbjct: 251 TLSFQRAIPGGALGEGAALATYMIPFLLAAIMFSYFGLQRRGWQQGGDK 299 >ref|YP_004417114.1| binding-protein-dependent transport systems inner membrane component [Pusillimonas sp. T7-7] gb|AEC20490.1| binding-protein-dependent transport systems inner membrane component [Pusillimonas sp. T7-7] Length = 300 Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust. Identities = 234/289 (80%), Positives = 263/289 (91%) Query: 1 VLGMLFMAPAVLLLVVFLTYPLGLGIWLGFTDTKIGGEGSFIGLDNYSYLLGDSLAQLSL 60 VLG+LFM P+ +LL+VFLTYPLGLG+WLGFTDT +G G +IGLDNY YL+GD + QL+L Sbjct: 12 VLGILFMLPSAILLLVFLTYPLGLGVWLGFTDTDLGSSGEWIGLDNYLYLIGDPVTQLAL 71 Query: 61 FNTLFYTITASILKFVLGLWLAILLNKNLPLKSFFRAIVLLPWIVPTALSALAFWWMYDS 120 FNT+FYT ASI+KF LGLWLA+LLNKNLP KS FR+IVLLPWIVPTALSALAFWW+YD+ Sbjct: 72 FNTIFYTTVASIVKFGLGLWLALLLNKNLPFKSLFRSIVLLPWIVPTALSALAFWWIYDA 131 Query: 121 QFSVISWALVKMGLIDHYIDFLGEPWLARISTVVANVWRGIPFVAISLLAGLQTISPSLY 180 QFS+ISW LVK+GLID YI+FLG+PW AR ST+ AN+WRGIPFVAI+LLAGLQTISP+LY Sbjct: 132 QFSIISWTLVKLGLIDEYINFLGDPWNARFSTIAANIWRGIPFVAITLLAGLQTISPALY 191 Query: 181 EAAAIDGAKPWQQFRYVTLPLLTPIIAVVMTFSVLFTFTDFQLIYVLTRGGPLNATHLMA 240 EAA+IDG PWQQFRYVTLPLLTPIIAVVMTFSVLFTFTDFQLIYVLTRGGPLNATHLM Sbjct: 192 EAASIDGVSPWQQFRYVTLPLLTPIIAVVMTFSVLFTFTDFQLIYVLTRGGPLNATHLMT 251 Query: 241 TLSFQRAIPGGSLGEGAALATYMIPFLLAAIMFSYFGLQRRGWQQGGDK 289 TLSFQRAIPGG+LGEG+ALA MIPFLL AIMFSYFGLQR+ WQ+GGDK Sbjct: 252 TLSFQRAIPGGALGEGSALAIMMIPFLLGAIMFSYFGLQRQAWQRGGDK 300 >ref|YP_004157653.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] gb|ADU39542.1| binding-protein-dependent transport systems inner membrane component [Variovorax paradoxus EPS] Length = 302 Score = 452 bits (1164), Expect = e-125, Method: Compositional matrix adjust. Identities = 222/289 (76%), Positives = 259/289 (89%), Gaps = 1/289 (0%) Query: 2 LGMLFMAPAVLLLVVFLTYPLGLGIWLGFTDTKIGGEGSFIGLDNYSYLLGDSLAQLSLF 61 LG+ FM PA +LL++FLTYPLGLG +LGFTD K+G G ++GL+NY YL GD++ +L+LF Sbjct: 14 LGLAFMLPAAVLLLLFLTYPLGLGTYLGFTDAKVGRAGQWVGLENYEYLWGDAVTRLALF 73 Query: 62 NTLFYTITASILKFVLGLWLAILLNKNLPLKSFFRAIVLLPWIVPTALSALAFWWMYDSQ 121 NTLFYT AS+ KF LGLWLAILLN+N+ K+FFRA++LLP+IVPTALSA+AFWW+YDSQ Sbjct: 74 NTLFYTTVASVFKFFLGLWLAILLNRNIRFKTFFRAVILLPYIVPTALSAIAFWWIYDSQ 133 Query: 122 FSVISWALVKMGLIDHYIDFLGEPWLARISTVVANVWRGIPFVAISLLAGLQTISPSLYE 181 FS+ISWALVKMGLID YIDFLG W ARI+ ++ANVWRG+PFVAI+LLAGLQTISPS YE Sbjct: 134 FSIISWALVKMGLIDQYIDFLGSEWNARIAVIIANVWRGVPFVAITLLAGLQTISPSYYE 193 Query: 182 AAAIDGAKPWQQFRYVTLPLLTPIIAVVMTFSVLFTFTDFQLIYVLTRGGPLNATHLMAT 241 A+AIDGA PWQQFR+VT+PLLTPIIAVVMTFSVLFTFTDFQLIYV+TRGGPLNATHLMAT Sbjct: 194 ASAIDGATPWQQFRHVTMPLLTPIIAVVMTFSVLFTFTDFQLIYVITRGGPLNATHLMAT 253 Query: 242 LSFQRAIPGGSLGEGAALATYMIPFLLAAIMFSYFGLQRRGWQQGG-DK 289 LSFQRAI GG+LGEGAA+A M+PFLLA +MFS+FGLQRR WQQGG DK Sbjct: 254 LSFQRAISGGALGEGAAIAIAMVPFLLACVMFSFFGLQRRAWQQGGSDK 302 >ref|ZP_03529067.1| binding-protein-dependent transport systems inner membrane component [Rhizobium etli CIAT 894] Length = 308 Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust. Identities = 221/289 (76%), Positives = 253/289 (87%) Query: 1 VLGMLFMAPAVLLLVVFLTYPLGLGIWLGFTDTKIGGEGSFIGLDNYSYLLGDSLAQLSL 60 VLG LFM PA + LV FLTYPLGLG+WLGFTDT+IG +G FIGL+NY +L+ DS+ LS+ Sbjct: 20 VLGFLFMLPAAVFLVCFLTYPLGLGVWLGFTDTRIGRDGIFIGLENYQFLMEDSVFWLSV 79 Query: 61 FNTLFYTITASILKFVLGLWLAILLNKNLPLKSFFRAIVLLPWIVPTALSALAFWWMYDS 120 FNT+ YT AS+LKF LGLWLA+LLN++LP KSFFRAIVLLPW+VPT LSALAFWW+YDS Sbjct: 80 FNTILYTFVASVLKFALGLWLAMLLNQHLPYKSFFRAIVLLPWVVPTVLSALAFWWIYDS 139 Query: 121 QFSVISWALVKMGLIDHYIDFLGEPWLARISTVVANVWRGIPFVAISLLAGLQTISPSLY 180 QFS+ISW+L+K+GLI I+FLG+P ARIS +VANVWRGIPFVAISLLAGLQTI SL Sbjct: 140 QFSIISWSLMKLGLISGPINFLGDPINARISVIVANVWRGIPFVAISLLAGLQTIPASLQ 199 Query: 181 EAAAIDGAKPWQQFRYVTLPLLTPIIAVVMTFSVLFTFTDFQLIYVLTRGGPLNATHLMA 240 EAA++DGA WQ+FRYVTLP+LTPIIAVVMTFSVLFTFTDFQLIYVLT+GGP+NATHLMA Sbjct: 200 EAASLDGATSWQRFRYVTLPMLTPIIAVVMTFSVLFTFTDFQLIYVLTKGGPVNATHLMA 259 Query: 241 TLSFQRAIPGGSLGEGAALATYMIPFLLAAIMFSYFGLQRRGWQQGGDK 289 TLSFQR IPGG LGEGAA+A M+PFLL AIMFS+FGLQRR WQQGG Sbjct: 260 TLSFQRGIPGGQLGEGAAIAVAMVPFLLGAIMFSFFGLQRRKWQQGGQD 308 >ref|YP_002277989.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] gb|ACI58889.1| binding-protein-dependent transport systems inner membrane component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 310 Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust. Identities = 221/289 (76%), Positives = 253/289 (87%) Query: 1 VLGMLFMAPAVLLLVVFLTYPLGLGIWLGFTDTKIGGEGSFIGLDNYSYLLGDSLAQLSL 60 VLG LFM PA + LV FLTYPLGLG+WLGFTDT+IG +G FIGL+NY +L+ DS+ LS+ Sbjct: 22 VLGFLFMLPAAVFLVCFLTYPLGLGVWLGFTDTRIGRDGIFIGLENYQFLMDDSVFWLSV 81 Query: 61 FNTLFYTITASILKFVLGLWLAILLNKNLPLKSFFRAIVLLPWIVPTALSALAFWWMYDS 120 FNT+ YT AS+LKF LGLWLA+LLN++LP KSFFRAIVLLPW+VPT LSALAFWW+YDS Sbjct: 82 FNTILYTSVASVLKFALGLWLAMLLNQHLPYKSFFRAIVLLPWVVPTVLSALAFWWIYDS 141 Query: 121 QFSVISWALVKMGLIDHYIDFLGEPWLARISTVVANVWRGIPFVAISLLAGLQTISPSLY 180 QFS+ISW+L+K+GLI I+FLG+P ARIS +VANVWRGIPFVAISLLAGLQTI SL Sbjct: 142 QFSIISWSLMKLGLISGPINFLGDPINARISVIVANVWRGIPFVAISLLAGLQTIPASLQ 201 Query: 181 EAAAIDGAKPWQQFRYVTLPLLTPIIAVVMTFSVLFTFTDFQLIYVLTRGGPLNATHLMA 240 EAA++DGA WQ+FRYVTLP+LTPIIAVVMTFSVLFTFTDFQLIYVLT+GGP+NATHLMA Sbjct: 202 EAASLDGATSWQRFRYVTLPMLTPIIAVVMTFSVLFTFTDFQLIYVLTKGGPVNATHLMA 261 Query: 241 TLSFQRAIPGGSLGEGAALATYMIPFLLAAIMFSYFGLQRRGWQQGGDK 289 TLSFQR IPGG LGEGAA+A M+PFLL AIMFS+FGLQRR WQQGG Sbjct: 262 TLSFQRGIPGGQLGEGAAIAVAMVPFLLGAIMFSFFGLQRRKWQQGGQD 310