BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0070.p (158 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_999256.1| hypothetical protein Veis_4540 [Verminephrobact... 208 2e-52 ref|YP_003776721.1| hypothetical protein Hsero_3332 [Herbaspiril... 167 5e-40 ref|YP_549822.1| hypothetical protein Bpro_3010 [Polaromonas sp.... 114 7e-24 ref|YP_002944123.1| hypothetical protein Vapar_2222 [Variovorax ... 112 2e-23 ref|ZP_02188545.1| hypothetical protein BAL199_05154 [alpha prot... 111 4e-23 >ref|YP_999256.1| hypothetical protein Veis_4540 [Verminephrobacter eiseniae EF01-2] gb|ABM60238.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2] Length = 156 Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 114/158 (72%), Positives = 133/158 (84%), Gaps = 2/158 (1%) Query: 1 MKINDTVSGILLAIFAAAIYVYSANLPTMAQQIGPGLFPQALAVAFLICAILLMVKGVRE 60 MKINDT+SG+LLA+FAAAI++Y+ P+M QQ+GP LFPQ LA F+ICA LL+ KG+R+ Sbjct: 1 MKINDTLSGLLLALFAAAIFIYAGTFPSMRQQVGPALFPQLLAGGFMICAFLLICKGLRQ 60 Query: 61 RRASGESWVSLPEWAGERRAVFAYALVLLSLVFYIYASEPLGFLPTATILLLSLFATFGA 120 R E+W SLP W GERRAVFAY LVLLSLVFYI A E LGFLPTATILLLSL TFGA Sbjct: 61 TRT--EAWFSLPPWFGERRAVFAYLLVLLSLVFYICACEALGFLPTATILLLSLSMTFGA 118 Query: 121 RLVVALPVALASALGIHYIFYKLLKVPLPWGLLKSVAW 158 RL VA+P+A+ASALGIH IFYKLLKVPLPWG+L+S+AW Sbjct: 119 RLAVAMPMAIASALGIHCIFYKLLKVPLPWGMLESIAW 156 >ref|YP_003776721.1| hypothetical protein Hsero_3332 [Herbaspirillum seropedicae SmR1] gb|ADJ64813.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1] Length = 176 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 93/176 (52%), Positives = 117/176 (66%), Gaps = 18/176 (10%) Query: 1 MKINDTVSGILLAIFAAAIYVYSANLPTMAQQIGPGLFPQALAVAFLICAILLMVK---- 56 MKIND +SG+++A+FA +++ S+ LP M Q IGP +FPQALAV LICA+LL+++ Sbjct: 1 MKINDALSGLVVALFAVVLWIASSRLPAMGQDIGPNVFPQALAVGLLICAVLLVLRGLRG 60 Query: 57 --GVRERRA------------SGESWVSLPEWAGERRAVFAYALVLLSLVFYIYASEPLG 102 + R A W +LPEW G AV A+ LV SL+FYI+ SEPLG Sbjct: 61 LRKTKARSAHVSTFSTTGAADQDAHWFTLPEWIGNSHAVLAFLLVPASLLFYIWVSEPLG 120 Query: 103 FLPTATILLLSLFATFGARLVVALPVALASALGIHYIFYKLLKVPLPWGLLKSVAW 158 FLPTA +LLL LF TF RL+ A+P ALA AL IH IFYKLLKVPLPWG+L +AW Sbjct: 121 FLPTAFVLLLVLFVTFRTRLLTAVPTALACALIIHTIFYKLLKVPLPWGILTPLAW 176 >ref|YP_549822.1| hypothetical protein Bpro_3010 [Polaromonas sp. JS666] gb|ABE44924.1| conserved hypothetical protein [Polaromonas sp. JS666] Length = 157 Score = 114 bits (284), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 63/159 (39%), Positives = 98/159 (61%), Gaps = 3/159 (1%) Query: 1 MKINDTVSGILLAIFAAAIYVYSANLPTM-AQQIGPGLFPQALAVAFLICAILLMVKGVR 59 MK+ND + G++LA+ A + + P + QQ+GP LFP +A + ++LMV+G Sbjct: 1 MKLNDAIFGLVLALLGAVVLFTVQSFPKIPGQQVGPALFPGLIAAGLCVGGVVLMVRGWH 60 Query: 60 ERRASGESWVSLPEWAGERRAVFAYALVLLSLVFYIYASEPLGFLPTATILLLSLFATFG 119 R A+ WV W R V A+++ S++FY+ A++ LGFL TAT++L ++F Sbjct: 61 ARAAA--PWVRFEGWTQSPRHVLGLAVLVASVLFYMLAADKLGFLLTATLILTAMFYVLR 118 Query: 120 ARLVVALPVALASALGIHYIFYKLLKVPLPWGLLKSVAW 158 L +L +A+ ++L IH+ FYKLL+VPLPWGLL + AW Sbjct: 119 VPLGRSLLIAIIASLLIHFAFYKLLRVPLPWGLLVNHAW 157 >ref|YP_002944123.1| hypothetical protein Vapar_2222 [Variovorax paradoxus S110] gb|ACS18857.1| conserved hypothetical protein [Variovorax paradoxus S110] Length = 157 Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/159 (45%), Positives = 98/159 (61%), Gaps = 3/159 (1%) Query: 1 MKINDTVSG-ILLAIFAAAIYVYSANLPTMAQQIGPGLFPQALAVAFLICAILLMVKGVR 59 MK ND + G ILLA+ + V QQ+GP LFP +A +C +L+ KG R Sbjct: 1 MKFNDAIFGAILLALGIVVLAVVQGYPGIPGQQVGPALFPGLIAAGLCVCGAMLLAKGWR 60 Query: 60 ERRASGESWVSLPEWAGERRAVFAYALVLLSLVFYIYASEPLGFLPTATILLLSLFATFG 119 ER A+ +WV L +WA R V + ALV+ +++FY++ASE LGFLPTA + LL+L Sbjct: 61 ERHAA--AWVRLGDWAASPRHVLSAALVIGAVLFYMFASERLGFLPTAAVSLLALMLAMR 118 Query: 120 ARLVVALPVALASALGIHYIFYKLLKVPLPWGLLKSVAW 158 AL +AL +AL IH FYKLL+VPLPWG+L +AW Sbjct: 119 VPPGRALLIALVAALLIHAAFYKLLRVPLPWGVLMPIAW 157 >ref|ZP_02188545.1| hypothetical protein BAL199_05154 [alpha proteobacterium BAL199] gb|EDP64821.1| hypothetical protein BAL199_05154 [alpha proteobacterium BAL199] Length = 158 Score = 111 bits (277), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 2/155 (1%) Query: 1 MKINDTVSGILLAIFAAAIYVYSANLPTM-AQQIGPGLFPQALAVAFLICAILLMVKGVR 59 M+ ND + G++L +FA + + P + Q G LFP+ L V F +C +LL+ G+R Sbjct: 1 MRFNDAIIGLVLIVFALVAGYATRDFPQIPGQSYGAALFPRLLCVGFAVCGLLLIASGMR 60 Query: 60 ERRASGESWVSLPEWAGERRAVFAYALVLLSLVFYIYASEPLGFLPTATILLLSLFATFG 119 +R +G +W+ L +WA A+ + +VFYI SE LGF+PTA ++ SL Sbjct: 61 QRATAG-AWLDLDDWARSFSGPLTLAITIGGMVFYILVSESLGFIPTAFLMTASLLLRLR 119 Query: 120 ARLVVALPVALASALGIHYIFYKLLKVPLPWGLLK 154 R + +L +A + IH IFYKLL VPLPWG+L+ Sbjct: 120 GRWISSLAIAAMVTMVIHQIFYKLLLVPLPWGVLE 154